Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2073

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
2,465,501	+		Pf6N2E2_2070	0.80	+1.3
2,465,501	+		Pf6N2E2_2070	0.80	+0.8
2,465,501	+		Pf6N2E2_2070	0.80	+0.3
2,465,501	+		Pf6N2E2_2070	0.80	+0.5
2,465,501	+		Pf6N2E2_2070	0.80	-0.5
2,465,501	+		Pf6N2E2_2070	0.80	-0.7
2,465,501	+		Pf6N2E2_2070	0.80	+0.5
2,465,501	+		Pf6N2E2_2070	0.80	-0.6
2,465,501	+		Pf6N2E2_2070	0.80	+0.6
2,465,502	-		Pf6N2E2_2070	0.80	+1.0
2,465,502	-		Pf6N2E2_2070	0.80	-0.3
2,465,502	-		Pf6N2E2_2070	0.80	-0.5
2,465,502	-		Pf6N2E2_2070	0.80	-0.3
2,465,502	-		Pf6N2E2_2070	0.80	+1.6
2,465,525	+		Pf6N2E2_2070	0.82	+0.7
2,465,525	+		Pf6N2E2_2070	0.82	-0.5
2,465,525	+		Pf6N2E2_2070	0.82	-0.7
2,465,526	-		Pf6N2E2_2070	0.82	+0.4
2,465,526	-		Pf6N2E2_2070	0.82	-0.6
2,465,598	-		Pf6N2E2_2070	0.90	-0.5
2,465,598	-		Pf6N2E2_2070	0.90	+0.4
2,465,654	+				+0.4
2,465,654	+				+1.5
2,465,654	+				+0.1
2,465,654	+				+1.1
2,465,654	+				-0.5
2,465,655	-				+0.7
2,465,655	-				-2.0
2,465,655	-				+0.8
2,465,655	-				-0.5
2,465,779	+				+0.3
2,465,780	-				+0.2
2,465,780	-				+0.9
2,465,780	-				-1.1
2,465,808	+				+0.1
2,465,808	+				+0.6
2,465,808	+				+0.8
2,465,809	-				+1.1
2,465,809	-				+0.6
2,465,831	-				-0.8
2,465,833	+				-1.3
2,465,834	-				-0.1
2,465,845	+				+0.3
2,465,845	+				+0.7
2,465,845	+				-0.3
2,465,846	-				+0.0
2,465,846	-				-0.5
2,465,846	-				-0.3
2,465,846	-				+0.1
2,465,847	+				-1.7
2,465,914	+				+1.5
2,465,915	-				-0.5
2,465,915	-				+1.7
2,465,915	-				+0.3
2,465,991	-		Pf6N2E2_2071	0.68	-0.2
2,465,991	-		Pf6N2E2_2071	0.68	+0.0
2,465,991	-		Pf6N2E2_2071	0.68	-0.0
2,466,050	+				-0.3
2,466,050	+				+1.0
2,466,051	-				-0.3
2,466,051	-				-0.3
2,466,080	+				-2.3
2,466,080	+				+0.6
2,466,080	+				+0.6
2,466,080	+				+0.2
2,466,081	-				-1.3
2,466,081	-				-1.2
2,466,121	+				-0.3
2,466,121	+				-0.9
2,466,121	+				+0.2
2,466,122	-				-0.7
2,466,122	-				-0.0
2,466,124	+				-0.3
2,466,124	+				-1.6
2,466,125	-				+0.3
2,466,125	-				+0.0
2,466,125	-				+0.1
2,466,151	+				+0.2
2,466,151	+				+1.2
2,466,158	-				-0.1
2,466,194	+		Pf6N2E2_2072	0.35	-0.3
2,466,194	+		Pf6N2E2_2072	0.35	-0.1
2,466,194	+		Pf6N2E2_2072	0.35	-0.9
2,466,194	+		Pf6N2E2_2072	0.35	+1.0
2,466,195	-		Pf6N2E2_2072	0.36	-2.1
2,466,195	-		Pf6N2E2_2072	0.36	-0.9
2,466,214	-		Pf6N2E2_2072	0.51	+0.6
2,466,315	+				-0.3
2,466,315	+				+0.5
2,466,315	+				-1.0
2,466,315	+				+0.3
2,466,315	+				-1.0
2,466,315	+				-2.6
2,466,315	+				-1.3
2,466,316	-				+0.4
2,466,316	-				-0.8
2,466,316	-				-1.3
2,466,316	-				-0.7
2,466,316	-				-0.3
2,466,316	-				-0.5
2,466,316	-				+0.6
2,466,316	-				+0.7
2,466,316	-				+0.4
2,466,316	-				-0.8
2,466,316	-				-2.8
2,466,317	+				-1.0
2,466,317	+				-1.8
2,466,317	+				-2.0
2,466,317	+				-0.3
2,466,317	+				+0.5
2,466,317	+				+0.7
2,466,317	+				+0.9
2,466,318	-				-0.7
2,466,318	-				-0.4
2,466,318	-				+0.7
2,466,318	-				-0.6
2,466,318	-				-3.3
2,466,318	-				-0.9
2,466,318	-				+0.3
2,466,318	-				-1.1
2,466,318	-				-0.5
2,466,318	-				-0.1
2,466,318	-				+0.7
2,466,318	-				-1.8
2,466,318	-				-1.1
2,466,318	-				+0.5
2,466,318	-				-0.8
2,466,318	-				-1.1
2,466,318	-				-0.6
2,466,318	-				+0.7
2,466,318	-				+0.2
2,466,321	+				-2.8
2,466,321	+				+0.3
2,466,321	+				-0.7
2,466,321	+				+1.3
2,466,322	-				-0.3
2,466,322	-				+0.4
2,466,322	-				-0.1
2,466,322	-				-0.8
2,466,322	-				-0.4
2,466,322	-				-0.5
2,466,322	-				+1.1
2,466,322	-				+0.3
2,466,322	-				-1.3
2,466,322	-				-1.0
2,466,325	+				+0.4
2,466,325	+				+1.3
2,466,325	+				+0.4
2,466,325	+				-1.5
2,466,326	-				+0.6
2,466,326	-				+1.1
2,466,326	-				-2.3
2,466,326	-				-1.4
2,466,326	-				+0.3
2,466,328	-				+1.1
2,466,337	-				-0.3
2,466,453	+		Pf6N2E2_2073	0.13	-1.2
2,466,453	+		Pf6N2E2_2073	0.13	-0.7
2,466,454	-		Pf6N2E2_2073	0.13	-0.3
2,466,454	-		Pf6N2E2_2073	0.13	+0.1
2,466,454	-		Pf6N2E2_2073	0.13	+0.2
2,466,454	-		Pf6N2E2_2073	0.13	-0.7
2,466,454	-				+0.3
2,466,454	-		Pf6N2E2_2073	0.13	+0.2
2,466,454	-		Pf6N2E2_2073	0.13	-0.8
2,466,454	-		Pf6N2E2_2073	0.13	+1.3
2,466,496	-		Pf6N2E2_2073	0.15	+0.6
2,466,550	-		Pf6N2E2_2073	0.18	+0.0
2,466,594	+		Pf6N2E2_2073	0.21	-1.8
2,466,595	-		Pf6N2E2_2073	0.21	-0.3
2,466,888	+		Pf6N2E2_2073	0.38	-0.9
2,466,888	+		Pf6N2E2_2073	0.38	-0.3
2,466,889	-		Pf6N2E2_2073	0.38	-0.8
2,466,920	-		Pf6N2E2_2073	0.40	-0.8
2,466,945	-		Pf6N2E2_2073	0.41	-0.4
2,467,026	+		Pf6N2E2_2073	0.46	+0.7
2,467,026	+		Pf6N2E2_2073	0.46	-2.8
2,467,027	-		Pf6N2E2_2073	0.46	-0.5
2,467,027	-		Pf6N2E2_2073	0.46	-0.7
2,467,027	-		Pf6N2E2_2073	0.46	-0.5
2,467,209	+		Pf6N2E2_2073	0.56	-0.7
2,467,317	+		Pf6N2E2_2073	0.62	-1.0
2,467,648	-		Pf6N2E2_2073	0.81	-0.8
2,467,764	+		Pf6N2E2_2073	0.88	-0.2
2,467,764	+		Pf6N2E2_2073	0.88	-0.6
2,467,878	+				-0.4
2,467,878	+				-1.0
2,467,878	+				-0.9
2,467,879	-				+1.5
2,467,892	+				-1.8
2,467,892	+				-1.8
2,467,920	+				-3.2
2,467,920	+				+0.3
2,467,920	+				-0.6
2,467,921	-				-0.7
2,467,921	-				-1.8
2,467,921	-				-0.6
2,467,928	+				-1.3
2,467,928	+				-0.5
2,467,928	+				-0.6
2,467,928	+				-1.5
2,467,959	+				-1.3
2,467,959	+				-1.6
2,467,960	-				+0.7
2,468,314	+		Pf6N2E2_2074	0.72	-0.5
2,468,315	-		Pf6N2E2_2074	0.72	+0.5
2,468,407	+				-1.2
2,468,407	+				+0.7
2,468,408	-				-0.4
2,468,603	-				+0.0
2,468,603	-				+1.0
2,468,615	-				+0.5
2,468,615	-				+0.6
2,468,723	-		Pf6N2E2_2075	0.11	+0.2
2,468,735	-		Pf6N2E2_2075	0.12	-1.3
2,468,873	-		Pf6N2E2_2075	0.25	-0.8