Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2021

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
2,408,620	+				+2.1
2,408,635	+				-1.5
2,408,635	+				+0.3
2,408,636	-				-1.6
2,408,676	+				-0.7
2,408,680	+				-1.0
2,408,712	+				-0.9
2,408,712	+				-1.3
2,408,712	+				+0.5
2,408,712	+				+0.3
2,408,712	+				+0.9
2,408,712	+				+1.5
2,408,712	+				+0.2
2,408,713	-				+0.2
2,408,713	-				+1.2
2,408,713	-				+0.5
2,408,713	-				-0.0
2,408,715	+				+1.4
2,408,776	+				+0.0
2,408,776	+				+0.1
2,408,776	+				-0.3
2,408,776	+				-0.3
2,408,776	+				+0.0
2,408,776	+				-0.2
2,408,777	-				-0.4
2,408,935	+				+0.7
2,408,935	+				-0.6
2,408,936	-				-0.7
2,408,936	-				-1.4
2,409,579	-				+1.3
2,409,593	-				-2.4
2,409,593	-				-0.1
2,409,614	+				-1.5
2,409,737	+				-0.4
2,409,737	+				-0.6
2,409,738	-				+0.0
2,409,877	+		Pf6N2E2_2021	0.17	-0.4
2,409,877	+		Pf6N2E2_2021	0.17	+0.5
2,410,081	+		Pf6N2E2_2021	0.29	-1.6
2,410,081	+		Pf6N2E2_2021	0.29	-1.5
2,410,081	+		Pf6N2E2_2021	0.29	-0.1
2,410,082	-		Pf6N2E2_2021	0.29	-0.1
2,410,082	-		Pf6N2E2_2021	0.29	-1.8
2,410,114	+		Pf6N2E2_2021	0.31	-1.8
2,410,114	+		Pf6N2E2_2021	0.31	-1.3
2,410,204	+		Pf6N2E2_2021	0.36	+1.7
2,410,205	-		Pf6N2E2_2021	0.36	-0.3
2,410,486	+		Pf6N2E2_2021	0.52	-2.9
2,410,486	+		Pf6N2E2_2021	0.52	-0.1
2,410,487	-		Pf6N2E2_2021	0.52	+0.6
2,410,487	-		Pf6N2E2_2021	0.52	-0.5
2,410,487	-		Pf6N2E2_2021	0.52	-0.6
2,410,489	+		Pf6N2E2_2021	0.52	+0.0
2,410,835	-		Pf6N2E2_2021	0.72	+0.2
2,410,889	-		Pf6N2E2_2021	0.75	+0.1
2,410,918	+		Pf6N2E2_2021	0.77	-1.1
2,410,918	+		Pf6N2E2_2021	0.77	-1.4
2,410,919	-		Pf6N2E2_2021	0.77	-0.9
2,410,921	+		Pf6N2E2_2021	0.77	+0.9
2,410,921	+		Pf6N2E2_2021	0.77	-0.2
2,410,921	+		Pf6N2E2_2021	0.77	-0.3
2,410,922	-		Pf6N2E2_2021	0.77	-1.9
2,410,922	-		Pf6N2E2_2021	0.77	+1.6
2,411,011	+		Pf6N2E2_2021	0.82	-0.7
2,411,011	+		Pf6N2E2_2021	0.82	-0.9
2,411,083	+		Pf6N2E2_2021	0.86	-2.3
2,411,090	-		Pf6N2E2_2021	0.86	-1.4
2,411,119	+		Pf6N2E2_2021	0.88	+0.3
2,411,119	+		Pf6N2E2_2021	0.88	+1.5
2,411,257	+				-1.1
2,411,258	-				-0.6
2,411,299	+				-3.1
2,411,300	-				-0.3
2,411,480	-		Pf6N2E2_2022	0.14	+1.9
2,411,490	+		Pf6N2E2_2022	0.16	+0.1
2,411,490	+		Pf6N2E2_2022	0.16	+1.3
2,411,491	-		Pf6N2E2_2022	0.16	+1.3
2,411,491	-		Pf6N2E2_2022	0.16	+0.7
2,411,491	-		Pf6N2E2_2022	0.16	+0.1
2,411,491	-		Pf6N2E2_2022	0.16	+0.7
2,411,540	+		Pf6N2E2_2022	0.25	+0.6
2,411,540	+		Pf6N2E2_2022	0.25	+1.2
2,411,541	-		Pf6N2E2_2022	0.25	-1.3
2,411,541	-		Pf6N2E2_2022	0.25	+0.3
2,411,541	-		Pf6N2E2_2022	0.25	+1.0
2,411,667	+		Pf6N2E2_2022	0.46	+1.7
2,411,667	+		Pf6N2E2_2022	0.46	-0.3
2,411,667	+		Pf6N2E2_2022	0.46	+0.7
2,411,667	+		Pf6N2E2_2022	0.46	+0.2
2,411,667	+		Pf6N2E2_2022	0.46	+0.6
2,411,668	-		Pf6N2E2_2022	0.46	+0.9
2,411,668	-		Pf6N2E2_2022	0.46	+2.0
2,411,951	+				+0.6
2,411,951	+				+1.3
2,411,952	-				-0.0
2,411,986	+				-0.1
2,411,986	+				-0.7
2,411,987	-				+0.8
2,411,987	-				+2.2
2,412,032	-				+1.0
2,412,083	-				+0.9
2,412,106	-				-0.1
2,412,122	+				+0.5
2,412,122	+				+1.3
2,412,123	-				-0.7
2,412,238	+		Pf6N2E2_2023	0.17	-1.2
2,412,238	+		Pf6N2E2_2023	0.17	+0.0
2,412,238	+		Pf6N2E2_2023	0.17	-2.6
2,412,239	-		Pf6N2E2_2023	0.17	-0.0