Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1624

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
1,899,552	+		Pf6N2E2_1623	0.37	-0.7
1,899,553	-		Pf6N2E2_1623	0.37	-3.1
1,899,691	-		Pf6N2E2_1623	0.46	+0.9
1,900,276	+		Pf6N2E2_1623	0.87	-0.7
1,900,276	+		Pf6N2E2_1623	0.87	-1.3
1,900,277	-		Pf6N2E2_1623	0.87	+0.8
1,900,277	-		Pf6N2E2_1623	0.87	+0.2
1,900,434	+				-0.7
1,900,434	+				-1.1
1,900,435	-				-0.9
1,900,435	-				-0.2
1,900,473	+				-0.5
1,900,509	+				-1.2
1,900,509	+				-1.0
1,900,510	-				+0.2
1,900,510	-				+0.6
1,900,567	+		Pf6N2E2_1624	0.34	-1.5
1,900,567	+		Pf6N2E2_1624	0.34	-2.6
1,900,568	-		Pf6N2E2_1624	0.34	+0.3
1,900,568	-		Pf6N2E2_1624	0.34	+0.4
1,900,672	-		Pf6N2E2_1624	0.82	-1.6
1,900,672	-		Pf6N2E2_1624	0.82	-1.4
1,900,751	-				+0.8
1,900,855	-				+1.2
1,900,855	-				+1.0
1,900,856	+				+1.3
1,900,856	+				-3.0
1,900,857	-				+2.0
1,900,857	-				+0.9
1,901,001	+		Pf6N2E2_1625	0.12	+0.8
1,901,031	-		Pf6N2E2_1625	0.16	+1.4
1,901,291	-		Pf6N2E2_1625	0.51	+0.6
1,901,383	+		Pf6N2E2_1625	0.64	+0.7
1,901,384	-		Pf6N2E2_1625	0.64	+0.4
1,901,648	+				+1.4
1,901,648	+				+1.2
1,901,659	+				+0.7
1,901,698	+				+2.0