Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1229

Experiment: D-Cycloserine 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.12 mg/ml
1,437,868	+		Pf6N2E2_1228	0.62	+0.4
1,437,883	+		Pf6N2E2_1228	0.63	-0.6
1,438,055	-		Pf6N2E2_1228	0.72	-1.8
1,438,055	-		Pf6N2E2_1228	0.72	-0.4
1,438,186	+		Pf6N2E2_1228	0.80	-0.3
1,438,204	-		Pf6N2E2_1228	0.80	-0.5
1,438,220	-		Pf6N2E2_1228	0.81	-0.6
1,438,220	-		Pf6N2E2_1228	0.81	-3.2
1,438,480	+				+0.1
1,438,481	-				-0.4
1,438,481	-				-0.3
1,438,481	-				+0.5
1,438,486	+				-0.4
1,438,486	+				-0.9
1,438,486	+				+0.5
1,438,487	-				+0.4
1,438,549	+				-0.2
1,438,549	+				-0.4
1,438,549	+				+0.2
1,438,550	-				+1.0
1,438,550	-				+1.2
1,438,555	+				-0.2
1,438,555	+				-0.6
1,438,555	+				+0.2
1,438,555	+				+1.2
1,438,559	+				-0.4
1,438,559	+				+0.8
1,438,559	+				+1.6
1,438,560	-				+0.5
1,438,596	+				+0.9
1,438,597	-				-0.6
1,438,597	-				-0.4
1,438,609	+				+0.9
1,438,610	-				+0.2
1,438,652	+				+0.6
1,438,652	+				-0.6
1,438,652	+				+1.8
1,438,802	+				+0.8
1,438,803	-				-0.0
1,438,803	-				+0.3
1,438,987	+				+0.2
1,438,987	+				+0.4
1,438,987	+				+0.1
1,438,988	-				-1.4
1,438,988	-				-1.1
1,438,988	-				+0.5
1,438,988	-				-0.9
1,438,988	-				-0.9
1,438,988	-				+1.1
1,439,016	+				+0.7
1,439,017	-				-0.2
1,439,129	+		Pf6N2E2_1229	0.13	+0.6
1,439,129	+		Pf6N2E2_1229	0.13	+0.6
1,439,129	+		Pf6N2E2_1229	0.13	-1.2
1,439,130	-		Pf6N2E2_1229	0.13	-1.4
1,439,130	-		Pf6N2E2_1229	0.13	+0.6
1,439,130	-		Pf6N2E2_1229	0.13	+1.5
1,439,130	-		Pf6N2E2_1229	0.13	+0.4
1,439,130	-		Pf6N2E2_1229	0.13	+0.8
1,439,354	+		Pf6N2E2_1229	0.20	-2.1
1,439,355	-		Pf6N2E2_1229	0.20	-0.3
1,439,414	+		Pf6N2E2_1229	0.22	+0.8
1,439,497	-		Pf6N2E2_1229	0.25	+0.1
1,439,591	+		Pf6N2E2_1229	0.28	-1.8
1,439,748	-		Pf6N2E2_1229	0.33	+0.7
1,439,803	-		Pf6N2E2_1229	0.35	+0.5
1,439,900	+		Pf6N2E2_1229	0.38	+0.7
1,439,900	+		Pf6N2E2_1229	0.38	-1.1
1,439,900	+		Pf6N2E2_1229	0.38	-0.6
1,439,900	+		Pf6N2E2_1229	0.38	+0.2
1,439,900	+		Pf6N2E2_1229	0.38	-1.0
1,439,900	+		Pf6N2E2_1229	0.38	-1.0
1,439,900	+		Pf6N2E2_1229	0.38	-0.8
1,439,901	-		Pf6N2E2_1229	0.38	-1.2
1,439,901	-		Pf6N2E2_1229	0.38	+0.2
1,439,934	+		Pf6N2E2_1229	0.39	-0.1
1,440,107	+		Pf6N2E2_1229	0.44	-1.4
1,440,108	-		Pf6N2E2_1229	0.44	-0.8
1,440,314	+		Pf6N2E2_1229	0.51	-0.1
1,440,500	+		Pf6N2E2_1229	0.57	-0.8
1,440,501	-		Pf6N2E2_1229	0.57	-1.4
1,440,646	+		Pf6N2E2_1229	0.62	+0.6
1,440,646	+		Pf6N2E2_1229	0.62	+1.2
1,440,677	+		Pf6N2E2_1229	0.63	-0.2
1,440,803	+		Pf6N2E2_1229	0.67	+0.9
1,440,959	+		Pf6N2E2_1229	0.72	+1.4
1,440,960	-		Pf6N2E2_1229	0.72	+0.1
1,440,998	+		Pf6N2E2_1229	0.73	-0.6
1,440,998	+		Pf6N2E2_1229	0.73	-0.8
1,440,999	-		Pf6N2E2_1229	0.73	-0.1
1,441,250	+		Pf6N2E2_1229	0.81	-1.1
1,441,250	+		Pf6N2E2_1229	0.81	-0.6
1,441,250	+		Pf6N2E2_1229	0.81	-0.4
1,441,250	+		Pf6N2E2_1229	0.81	-1.1
1,441,251	-		Pf6N2E2_1229	0.81	+1.2
1,441,332	-		Pf6N2E2_1229	0.84	+0.8
1,441,332	-		Pf6N2E2_1229	0.84	+0.2
1,441,475	+		Pf6N2E2_1229	0.89	-0.4
1,441,475	+		Pf6N2E2_1229	0.89	+0.0
1,441,475	+		Pf6N2E2_1229	0.89	+0.1
1,441,475	+		Pf6N2E2_1229	0.89	+0.3
1,441,475	+		Pf6N2E2_1229	0.89	-0.9
1,441,475	+		Pf6N2E2_1229	0.89	+0.0
1,441,475	+		Pf6N2E2_1229	0.89	+0.6
1,441,476	-		Pf6N2E2_1229	0.89	+0.3
1,441,487	+		Pf6N2E2_1229	0.89	-0.1
1,441,614	-				-0.4
1,441,710	-				+0.5
1,441,710	-				-2.0
1,441,841	+				-1.0
1,441,841	+				-1.4
1,441,842	-				+0.9
1,441,842	-				+0.4
1,441,842	-				+0.4
1,441,842	-				-0.2
1,441,842	-				-0.6
1,441,842	-				+0.1
1,441,842	-				+0.9
1,442,151	+				-0.1
1,442,152	-				+0.8
1,442,152	-				-0.8
1,442,154	+				-2.0
1,442,182	-				+1.9
1,442,220	+		Pf6N2E2_1231	0.11	+0.2
1,442,329	-		Pf6N2E2_1231	0.19	-0.4
1,442,435	-		Pf6N2E2_1231	0.26	-0.5
1,442,482	-		Pf6N2E2_1231	0.30	-1.6
1,442,482	-		Pf6N2E2_1231	0.30	+1.0
1,442,482	-		Pf6N2E2_1231	0.30	-1.1
1,442,482	-		Pf6N2E2_1231	0.30	-1.0
1,442,536	-		Pf6N2E2_1231	0.34	+0.9
1,442,536	-		Pf6N2E2_1231	0.34	+1.2
1,442,539	+		Pf6N2E2_1231	0.34	-0.4
1,442,539	+		Pf6N2E2_1231	0.34	+0.4
1,442,540	-		Pf6N2E2_1231	0.34	-3.7
1,442,540	-		Pf6N2E2_1231	0.34	-0.8
1,442,540	-		Pf6N2E2_1231	0.34	+0.4
1,442,540	-		Pf6N2E2_1231	0.34	-0.1