Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04794 and H281DRAFT_04795 overlap by 7 nucleotides H281DRAFT_04795 and H281DRAFT_04796 are separated by 10 nucleotides
H281DRAFT_04794: H281DRAFT_04794 - Glycosyltransferase involved in cell wall bisynthesis, at 222,151 to 223,083
_04794
H281DRAFT_04795: H281DRAFT_04795 - hypothetical protein, at 223,077 to 224,231
_04795
H281DRAFT_04796: H281DRAFT_04796 - Polysaccharide biosynthesis protein, at 224,242 to 225,486
_04796
Position (kb) 223
224
225 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 222.289 kb on + strand, within H281DRAFT_04794 at 222.290 kb on - strand, within H281DRAFT_04794 at 222.380 kb on - strand, within H281DRAFT_04794 at 222.382 kb on - strand, within H281DRAFT_04794 at 222.465 kb on - strand, within H281DRAFT_04794 at 222.663 kb on - strand, within H281DRAFT_04794 at 222.814 kb on - strand, within H281DRAFT_04794 at 223.202 kb on - strand, within H281DRAFT_04795 at 223.202 kb on - strand, within H281DRAFT_04795 at 223.206 kb on + strand, within H281DRAFT_04795 at 223.461 kb on - strand, within H281DRAFT_04795 at 223.490 kb on + strand, within H281DRAFT_04795 at 223.491 kb on - strand, within H281DRAFT_04795 at 223.897 kb on + strand, within H281DRAFT_04795 at 223.898 kb on - strand, within H281DRAFT_04795 at 223.988 kb on + strand, within H281DRAFT_04795 at 224.304 kb on - strand at 224.304 kb on - strand at 224.307 kb on - strand at 224.529 kb on - strand, within H281DRAFT_04796 at 224.594 kb on + strand, within H281DRAFT_04796 at 224.948 kb on + strand, within H281DRAFT_04796 at 224.949 kb on - strand, within H281DRAFT_04796 at 224.949 kb on - strand, within H281DRAFT_04796 at 225.176 kb on - strand, within H281DRAFT_04796 at 225.185 kb on + strand, within H281DRAFT_04796
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM remove 222,289 + H281DRAFT_04794 0.15 +0.6 222,290 - H281DRAFT_04794 0.15 +2.5 222,380 - H281DRAFT_04794 0.25 +1.2 222,382 - H281DRAFT_04794 0.25 +0.8 222,465 - H281DRAFT_04794 0.34 -0.5 222,663 - H281DRAFT_04794 0.55 -0.2 222,814 - H281DRAFT_04794 0.71 +0.5 223,202 - H281DRAFT_04795 0.11 +0.1 223,202 - H281DRAFT_04795 0.11 -0.0 223,206 + H281DRAFT_04795 0.11 +1.5 223,461 - H281DRAFT_04795 0.33 +1.0 223,490 + H281DRAFT_04795 0.36 +0.4 223,491 - H281DRAFT_04795 0.36 +0.4 223,897 + H281DRAFT_04795 0.71 -0.8 223,898 - H281DRAFT_04795 0.71 +0.5 223,988 + H281DRAFT_04795 0.79 +1.7 224,304 - -0.4 224,304 - +0.7 224,307 - +0.8 224,529 - H281DRAFT_04796 0.23 -2.9 224,594 + H281DRAFT_04796 0.28 -0.1 224,948 + H281DRAFT_04796 0.57 +0.8 224,949 - H281DRAFT_04796 0.57 -1.1 224,949 - H281DRAFT_04796 0.57 +0.5 225,176 - H281DRAFT_04796 0.75 +0.3 225,185 + H281DRAFT_04796 0.76 +1.4
Or see this region's nucleotide sequence