Experiment: A22 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_976 and Ac3H11_977 are separated by 71 nucleotides Ac3H11_977 and Ac3H11_978 are separated by 55 nucleotides Ac3H11_978 and Ac3H11_979 are separated by 30 nucleotides
Ac3H11_976 - Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), at 97,949 to 99,331
_976
Ac3H11_977 - Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein, at 99,403 to 100,080
_977
Ac3H11_978 - hypothetical protein, at 100,136 to 100,297
_978
Ac3H11_979 - HD-GYP domain, at 100,328 to 101,626
_979
Position (kb) 100
101 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 99.152 kb on + strand, within Ac3H11_976 at 99.152 kb on + strand, within Ac3H11_976 at 99.153 kb on - strand, within Ac3H11_976 at 99.153 kb on - strand, within Ac3H11_976 at 99.285 kb on - strand at 99.336 kb on + strand at 99.336 kb on + strand at 99.336 kb on + strand at 99.336 kb on + strand at 99.337 kb on - strand at 99.337 kb on - strand at 99.565 kb on + strand, within Ac3H11_977 at 99.619 kb on - strand, within Ac3H11_977 at 99.833 kb on - strand, within Ac3H11_977 at 99.833 kb on - strand, within Ac3H11_977 at 100.054 kb on + strand at 100.054 kb on + strand at 100.055 kb on - strand at 100.249 kb on + strand, within Ac3H11_978 at 100.249 kb on + strand, within Ac3H11_978 at 100.249 kb on + strand, within Ac3H11_978 at 100.250 kb on - strand, within Ac3H11_978 at 100.250 kb on - strand, within Ac3H11_978 at 100.250 kb on - strand, within Ac3H11_978 at 100.263 kb on + strand, within Ac3H11_978 at 100.263 kb on + strand, within Ac3H11_978 at 100.264 kb on - strand, within Ac3H11_978 at 100.264 kb on - strand, within Ac3H11_978 at 100.282 kb on + strand at 100.282 kb on + strand at 100.282 kb on + strand at 100.286 kb on + strand at 100.286 kb on + strand at 100.286 kb on + strand at 100.286 kb on + strand at 100.286 kb on + strand at 100.286 kb on + strand at 100.287 kb on - strand at 100.287 kb on - strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.376 kb on + strand at 100.377 kb on - strand at 100.377 kb on - strand at 100.377 kb on - strand at 100.377 kb on - strand at 100.377 kb on - strand at 100.490 kb on + strand, within Ac3H11_979 at 100.490 kb on + strand, within Ac3H11_979 at 100.490 kb on + strand, within Ac3H11_979 at 100.490 kb on + strand, within Ac3H11_979 at 100.491 kb on - strand, within Ac3H11_979 at 100.491 kb on - strand, within Ac3H11_979 at 100.609 kb on - strand, within Ac3H11_979 at 100.703 kb on + strand, within Ac3H11_979 at 100.703 kb on + strand, within Ac3H11_979 at 100.862 kb on - strand, within Ac3H11_979 at 100.876 kb on + strand, within Ac3H11_979 at 100.876 kb on + strand, within Ac3H11_979 at 100.877 kb on - strand, within Ac3H11_979 at 100.877 kb on - strand, within Ac3H11_979 at 101.224 kb on + strand, within Ac3H11_979 at 101.224 kb on + strand, within Ac3H11_979 at 101.224 kb on + strand, within Ac3H11_979
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.025 mg/ml remove 99,152 + Ac3H11_976 0.87 +0.5 99,152 + Ac3H11_976 0.87 +0.4 99,153 - Ac3H11_976 0.87 +1.2 99,153 - Ac3H11_976 0.87 +0.1 99,285 - +0.2 99,336 + +0.6 99,336 + +0.5 99,336 + +1.7 99,336 + +0.9 99,337 - -0.8 99,337 - -0.2 99,565 + Ac3H11_977 0.24 +0.3 99,619 - Ac3H11_977 0.32 +0.7 99,833 - Ac3H11_977 0.63 +0.7 99,833 - Ac3H11_977 0.63 -0.7 100,054 + +1.6 100,054 + +0.2 100,055 - +1.5 100,249 + Ac3H11_978 0.70 +1.2 100,249 + Ac3H11_978 0.70 +1.8 100,249 + Ac3H11_978 0.70 +1.1 100,250 - Ac3H11_978 0.70 +0.2 100,250 - Ac3H11_978 0.70 +0.5 100,250 - Ac3H11_978 0.70 +1.0 100,263 + Ac3H11_978 0.78 +1.9 100,263 + Ac3H11_978 0.78 -0.2 100,264 - Ac3H11_978 0.79 +1.1 100,264 - Ac3H11_978 0.79 -3.0 100,282 + +1.3 100,282 + -0.4 100,282 + -0.5 100,286 + +1.8 100,286 + +0.5 100,286 + +0.7 100,286 + +1.2 100,286 + +0.5 100,286 + +0.2 100,287 - -0.2 100,287 - +0.1 100,376 + -1.2 100,376 + -0.1 100,376 + +2.2 100,376 + -2.0 100,376 + +1.1 100,376 + -0.8 100,376 + -0.4 100,376 + -1.2 100,376 + +0.3 100,376 + -1.4 100,377 - +0.9 100,377 - -1.2 100,377 - +0.6 100,377 - +0.6 100,377 - -1.7 100,490 + Ac3H11_979 0.12 -0.4 100,490 + Ac3H11_979 0.12 -0.7 100,490 + Ac3H11_979 0.12 -0.6 100,490 + Ac3H11_979 0.12 -0.7 100,491 - Ac3H11_979 0.13 -0.7 100,491 - Ac3H11_979 0.13 -2.2 100,609 - Ac3H11_979 0.22 -0.2 100,703 + Ac3H11_979 0.29 +0.7 100,703 + Ac3H11_979 0.29 +1.4 100,862 - Ac3H11_979 0.41 -0.2 100,876 + Ac3H11_979 0.42 -0.7 100,876 + Ac3H11_979 0.42 -0.8 100,877 - Ac3H11_979 0.42 +0.9 100,877 - Ac3H11_979 0.42 -0.6 101,224 + Ac3H11_979 0.69 -1.4 101,224 + Ac3H11_979 0.69 -1.8 101,224 + Ac3H11_979 0.69 +0.3
Or see this region's nucleotide sequence