Experiment: A22 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_388 and Ac3H11_389 are separated by 24 nucleotides Ac3H11_389 and Ac3H11_390 are separated by 230 nucleotides Ac3H11_390 and Ac3H11_391 are separated by 10 nucleotides
Ac3H11_388 - Thymidine phosphorylase (EC 2.4.2.4), at 68,970 to 71,456
_388
Ac3H11_389 - TRAP transporter solute receptor, TAXI family, at 71,481 to 72,848
_389
Ac3H11_390 - hypothetical protein, at 73,079 to 73,594
_390
Ac3H11_391 - secreted hydrolase, at 73,605 to 74,402
_391
Position (kb) 71
72
73 Strain fitness (log2 ratio) -2
-1
0
1
2 at 70.752 kb on + strand, within Ac3H11_388 at 70.753 kb on - strand, within Ac3H11_388 at 70.882 kb on - strand, within Ac3H11_388 at 71.080 kb on - strand, within Ac3H11_388 at 71.080 kb on - strand, within Ac3H11_388 at 71.080 kb on - strand, within Ac3H11_388 at 71.222 kb on + strand at 71.223 kb on - strand at 71.578 kb on + strand at 71.578 kb on + strand at 71.578 kb on + strand at 71.579 kb on - strand at 71.579 kb on - strand at 71.593 kb on + strand at 71.593 kb on + strand at 71.593 kb on + strand at 71.593 kb on + strand at 71.594 kb on - strand at 71.714 kb on - strand, within Ac3H11_389 at 71.749 kb on + strand, within Ac3H11_389 at 71.749 kb on + strand, within Ac3H11_389 at 71.750 kb on - strand, within Ac3H11_389 at 71.750 kb on - strand, within Ac3H11_389 at 71.918 kb on + strand, within Ac3H11_389 at 71.919 kb on - strand, within Ac3H11_389 at 72.148 kb on + strand, within Ac3H11_389 at 72.148 kb on + strand, within Ac3H11_389 at 72.148 kb on + strand, within Ac3H11_389 at 72.148 kb on + strand, within Ac3H11_389 at 72.149 kb on - strand, within Ac3H11_389 at 72.149 kb on - strand, within Ac3H11_389 at 72.149 kb on - strand, within Ac3H11_389 at 72.149 kb on - strand, within Ac3H11_389 at 72.149 kb on - strand, within Ac3H11_389 at 72.149 kb on - strand, within Ac3H11_389 at 72.149 kb on - strand, within Ac3H11_389 at 72.436 kb on + strand, within Ac3H11_389 at 72.436 kb on + strand, within Ac3H11_389 at 72.436 kb on + strand, within Ac3H11_389 at 72.436 kb on + strand, within Ac3H11_389 at 72.436 kb on + strand, within Ac3H11_389 at 72.436 kb on + strand, within Ac3H11_389 at 72.436 kb on + strand, within Ac3H11_389 at 72.437 kb on - strand, within Ac3H11_389 at 72.437 kb on - strand, within Ac3H11_389 at 72.437 kb on - strand, within Ac3H11_389 at 72.437 kb on - strand, within Ac3H11_389 at 72.437 kb on - strand, within Ac3H11_389 at 72.464 kb on - strand, within Ac3H11_389 at 72.464 kb on - strand, within Ac3H11_389 at 72.552 kb on + strand, within Ac3H11_389 at 72.552 kb on + strand, within Ac3H11_389 at 72.552 kb on + strand, within Ac3H11_389 at 72.552 kb on + strand, within Ac3H11_389 at 72.553 kb on - strand, within Ac3H11_389 at 72.553 kb on - strand, within Ac3H11_389 at 72.553 kb on - strand, within Ac3H11_389 at 72.661 kb on + strand, within Ac3H11_389 at 72.723 kb on - strand at 72.748 kb on + strand at 72.749 kb on - strand at 72.749 kb on - strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.897 kb on + strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.898 kb on - strand at 72.958 kb on + strand at 72.959 kb on - strand at 73.080 kb on + strand at 73.080 kb on + strand at 73.081 kb on - strand at 73.081 kb on - strand at 73.170 kb on + strand, within Ac3H11_390 at 73.170 kb on + strand, within Ac3H11_390 at 73.170 kb on + strand, within Ac3H11_390 at 73.171 kb on - strand, within Ac3H11_390 at 73.299 kb on + strand, within Ac3H11_390 at 73.299 kb on + strand, within Ac3H11_390 at 73.299 kb on + strand, within Ac3H11_390 at 73.299 kb on + strand, within Ac3H11_390 at 73.299 kb on + strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.300 kb on - strand, within Ac3H11_390 at 73.580 kb on - strand at 73.580 kb on - strand at 73.580 kb on - strand at 73.606 kb on + strand at 73.607 kb on - strand at 73.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.025 mg/ml remove 70,752 + Ac3H11_388 0.72 +0.4 70,753 - Ac3H11_388 0.72 +0.7 70,882 - Ac3H11_388 0.77 +1.1 71,080 - Ac3H11_388 0.85 +0.4 71,080 - Ac3H11_388 0.85 +1.2 71,080 - Ac3H11_388 0.85 +0.4 71,222 + -0.8 71,223 - +0.5 71,578 + +0.5 71,578 + +0.5 71,578 + +0.2 71,579 - +1.3 71,579 - -0.4 71,593 + +1.1 71,593 + +0.1 71,593 + -0.3 71,593 + -0.1 71,594 - -0.7 71,714 - Ac3H11_389 0.17 +0.9 71,749 + Ac3H11_389 0.20 +0.6 71,749 + Ac3H11_389 0.20 +0.1 71,750 - Ac3H11_389 0.20 -0.6 71,750 - Ac3H11_389 0.20 +0.4 71,918 + Ac3H11_389 0.32 -1.1 71,919 - Ac3H11_389 0.32 +0.5 72,148 + Ac3H11_389 0.49 +0.1 72,148 + Ac3H11_389 0.49 -0.3 72,148 + Ac3H11_389 0.49 -1.7 72,148 + Ac3H11_389 0.49 +0.4 72,149 - Ac3H11_389 0.49 -0.3 72,149 - Ac3H11_389 0.49 -0.4 72,149 - Ac3H11_389 0.49 -0.7 72,149 - Ac3H11_389 0.49 +0.4 72,149 - Ac3H11_389 0.49 +0.6 72,149 - Ac3H11_389 0.49 -1.6 72,149 - Ac3H11_389 0.49 +0.1 72,436 + Ac3H11_389 0.70 -0.5 72,436 + Ac3H11_389 0.70 +0.1 72,436 + Ac3H11_389 0.70 +0.4 72,436 + Ac3H11_389 0.70 +0.3 72,436 + Ac3H11_389 0.70 +1.2 72,436 + Ac3H11_389 0.70 -0.7 72,436 + Ac3H11_389 0.70 +0.1 72,437 - Ac3H11_389 0.70 -0.1 72,437 - Ac3H11_389 0.70 +0.9 72,437 - Ac3H11_389 0.70 +1.6 72,437 - Ac3H11_389 0.70 +0.1 72,437 - Ac3H11_389 0.70 -1.3 72,464 - Ac3H11_389 0.72 +0.9 72,464 - Ac3H11_389 0.72 +0.5 72,552 + Ac3H11_389 0.78 +0.1 72,552 + Ac3H11_389 0.78 -0.0 72,552 + Ac3H11_389 0.78 -1.9 72,552 + Ac3H11_389 0.78 +0.3 72,553 - Ac3H11_389 0.78 +0.8 72,553 - Ac3H11_389 0.78 +1.4 72,553 - Ac3H11_389 0.78 +0.4 72,661 + Ac3H11_389 0.86 -0.4 72,723 - +0.9 72,748 + -1.1 72,749 - +2.7 72,749 - +1.5 72,897 + +1.1 72,897 + +0.4 72,897 + -1.1 72,897 + +0.3 72,897 + -0.9 72,897 + +0.6 72,897 + +0.3 72,897 + +0.3 72,897 + +0.2 72,897 + +0.2 72,897 + +0.8 72,897 + +0.3 72,897 + -0.4 72,897 + +0.4 72,898 - +0.2 72,898 - -2.6 72,898 - +0.9 72,898 - +0.5 72,898 - +0.4 72,898 - +0.2 72,898 - +0.4 72,898 - +1.0 72,898 - -0.2 72,898 - +0.7 72,898 - +0.5 72,898 - +0.3 72,898 - -0.3 72,898 - -0.3 72,898 - -0.7 72,898 - +0.7 72,898 - -0.1 72,898 - +0.5 72,898 - -0.4 72,958 + +0.3 72,959 - +0.5 73,080 + -0.1 73,080 + +0.1 73,081 - -1.6 73,081 - -0.3 73,170 + Ac3H11_390 0.18 -1.5 73,170 + Ac3H11_390 0.18 +0.5 73,170 + Ac3H11_390 0.18 -0.0 73,171 - Ac3H11_390 0.18 +0.1 73,299 + Ac3H11_390 0.43 -1.6 73,299 + Ac3H11_390 0.43 -0.2 73,299 + Ac3H11_390 0.43 -0.3 73,299 + Ac3H11_390 0.43 -2.0 73,299 + Ac3H11_390 0.43 +0.2 73,300 - Ac3H11_390 0.43 -0.4 73,300 - Ac3H11_390 0.43 -0.5 73,300 - Ac3H11_390 0.43 +0.1 73,300 - Ac3H11_390 0.43 +0.9 73,300 - Ac3H11_390 0.43 -0.8 73,300 - Ac3H11_390 0.43 -1.5 73,300 - Ac3H11_390 0.43 -1.0 73,300 - Ac3H11_390 0.43 -2.4 73,300 - Ac3H11_390 0.43 -0.7 73,580 - -0.0 73,580 - -0.1 73,580 - -1.4 73,606 + +0.0 73,607 - +0.0 73,607 - +0.1
Or see this region's nucleotide sequence