Experiment: A22 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3026 and Ac3H11_3027 are separated by 160 nucleotides Ac3H11_3027 and Ac3H11_3028 are separated by 54 nucleotides Ac3H11_3028 and Ac3H11_3029 are separated by 82 nucleotides Ac3H11_3029 and Ac3H11_3030 are separated by 42 nucleotides
Ac3H11_3026 - Excinuclease ABC subunit A, dimeric form, at 48,309 to 54,182
_3026
Ac3H11_3027 - FIG00347480: hypothetical protein, at 54,343 to 54,849
_3027
Ac3H11_3028 - hypothetical protein, at 54,904 to 55,047
_3028
Ac3H11_3029 - Ferredoxin, at 55,130 to 55,447
_3029
Ac3H11_3030 - Amidinotransferase family protein, at 55,490 to 56,500
_3030
Position (kb) 54
55 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 53.439 kb on + strand, within Ac3H11_3026 at 53.440 kb on - strand, within Ac3H11_3026 at 53.572 kb on + strand, within Ac3H11_3026 at 53.572 kb on + strand, within Ac3H11_3026 at 53.573 kb on - strand, within Ac3H11_3026 at 53.787 kb on + strand at 53.916 kb on + strand at 53.916 kb on + strand at 53.916 kb on + strand at 53.916 kb on + strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 53.917 kb on - strand at 54.233 kb on + strand at 54.233 kb on + strand at 54.281 kb on + strand at 54.281 kb on + strand at 54.282 kb on - strand at 54.282 kb on - strand at 54.282 kb on - strand at 54.282 kb on - strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.348 kb on + strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.349 kb on - strand at 54.372 kb on + strand at 54.372 kb on + strand at 55.295 kb on + strand, within Ac3H11_3029 at 55.295 kb on + strand, within Ac3H11_3029 at 55.446 kb on - strand at 55.471 kb on - strand at 55.474 kb on + strand at 55.474 kb on + strand at 55.475 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.025 mg/ml remove 53,439 + Ac3H11_3026 0.87 -1.7 53,440 - Ac3H11_3026 0.87 -0.1 53,572 + Ac3H11_3026 0.90 -1.2 53,572 + Ac3H11_3026 0.90 -1.0 53,573 - Ac3H11_3026 0.90 +0.3 53,787 + -2.2 53,916 + -0.8 53,916 + -0.1 53,916 + -1.3 53,916 + +1.5 53,917 - -0.3 53,917 - -0.2 53,917 - -1.8 53,917 - -1.2 53,917 - -0.9 53,917 - -2.0 53,917 - -0.3 53,917 - -2.4 53,917 - -2.3 53,917 - -2.6 54,233 + -0.3 54,233 + -1.0 54,281 + -0.5 54,281 + +0.7 54,282 - -0.8 54,282 - +0.1 54,282 - -0.8 54,282 - +0.1 54,348 + +0.0 54,348 + -1.3 54,348 + -0.4 54,348 + -0.7 54,348 + -1.0 54,348 + -0.1 54,349 - -2.5 54,349 - +0.2 54,349 - -0.5 54,349 - -3.2 54,349 - -0.4 54,349 - -1.1 54,349 - -1.2 54,372 + +0.3 54,372 + +0.1 55,295 + Ac3H11_3029 0.52 -1.6 55,295 + Ac3H11_3029 0.52 -0.4 55,446 - +0.9 55,471 - +0.6 55,474 + -0.5 55,474 + +0.4 55,475 - +0.7
Or see this region's nucleotide sequence