Experiment: A22 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_274 and Ac3H11_275 are separated by 14 nucleotides Ac3H11_275 and Ac3H11_276 are separated by 83 nucleotides Ac3H11_276 and Ac3H11_277 are separated by 30 nucleotides Ac3H11_277 and Ac3H11_278 are separated by 54 nucleotides
Ac3H11_274 - Probable MFS transporter precursor, at 99,458 to 100,717
_274
Ac3H11_275 - hypothetical protein, at 100,732 to 100,887
_275
Ac3H11_276 - Putative SAM-dependent methyltransferase Bucepa02006346, at 100,971 to 101,525
_276
Ac3H11_277 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 101,556 to 102,455
_277
Ac3H11_278 - FIG002207: Probable transmembrane protein, at 102,510 to 103,604
_278
Position (kb) 100
101
102 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 100.172 kb on + strand, within Ac3H11_274 at 100.173 kb on - strand, within Ac3H11_274 at 100.223 kb on + strand, within Ac3H11_274 at 100.224 kb on - strand, within Ac3H11_274 at 100.224 kb on - strand, within Ac3H11_274 at 100.224 kb on - strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.262 kb on + strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.263 kb on - strand, within Ac3H11_274 at 100.293 kb on + strand, within Ac3H11_274 at 100.293 kb on + strand, within Ac3H11_274 at 100.294 kb on - strand, within Ac3H11_274 at 100.294 kb on - strand, within Ac3H11_274 at 100.294 kb on - strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.304 kb on + strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.305 kb on - strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.343 kb on + strand, within Ac3H11_274 at 100.344 kb on - strand, within Ac3H11_274 at 100.344 kb on - strand, within Ac3H11_274 at 100.344 kb on - strand, within Ac3H11_274 at 100.357 kb on + strand, within Ac3H11_274 at 100.357 kb on + strand, within Ac3H11_274 at 100.357 kb on + strand, within Ac3H11_274 at 100.358 kb on - strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.361 kb on + strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.362 kb on - strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.424 kb on + strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.425 kb on - strand, within Ac3H11_274 at 100.586 kb on + strand, within Ac3H11_274 at 100.586 kb on + strand, within Ac3H11_274 at 100.586 kb on + strand, within Ac3H11_274 at 100.587 kb on - strand, within Ac3H11_274 at 100.587 kb on - strand, within Ac3H11_274 at 100.587 kb on - strand, within Ac3H11_274 at 100.592 kb on + strand at 100.592 kb on + strand at 100.592 kb on + strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.593 kb on - strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.610 kb on + strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.611 kb on - strand at 100.615 kb on + strand at 100.625 kb on + strand at 100.625 kb on + strand at 100.625 kb on + strand at 100.625 kb on + strand at 100.626 kb on - strand at 100.626 kb on - strand at 100.626 kb on - strand at 100.626 kb on - strand at 100.831 kb on + strand, within Ac3H11_275 at 100.831 kb on + strand, within Ac3H11_275 at 100.831 kb on + strand, within Ac3H11_275 at 100.831 kb on + strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.832 kb on - strand, within Ac3H11_275 at 100.950 kb on - strand at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.235 kb on + strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.236 kb on - strand, within Ac3H11_276 at 101.298 kb on + strand, within Ac3H11_276 at 101.298 kb on + strand, within Ac3H11_276 at 101.299 kb on - strand, within Ac3H11_276 at 101.299 kb on - strand, within Ac3H11_276 at 101.299 kb on - strand, within Ac3H11_276 at 101.409 kb on + strand, within Ac3H11_276 at 101.410 kb on - strand, within Ac3H11_276 at 101.519 kb on + strand at 101.519 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.536 kb on + strand at 101.536 kb on + strand at 101.579 kb on + strand at 101.579 kb on + strand at 101.634 kb on + strand at 101.666 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.025 mg/ml remove 100,172 + Ac3H11_274 0.57 +0.5 100,173 - Ac3H11_274 0.57 +0.1 100,223 + Ac3H11_274 0.61 +0.3 100,224 - Ac3H11_274 0.61 -1.3 100,224 - Ac3H11_274 0.61 -1.7 100,224 - Ac3H11_274 0.61 +0.3 100,262 + Ac3H11_274 0.64 +0.0 100,262 + Ac3H11_274 0.64 +1.3 100,262 + Ac3H11_274 0.64 +0.2 100,262 + Ac3H11_274 0.64 +0.9 100,262 + Ac3H11_274 0.64 +0.6 100,263 - Ac3H11_274 0.64 +0.1 100,263 - Ac3H11_274 0.64 +0.4 100,263 - Ac3H11_274 0.64 -0.1 100,263 - Ac3H11_274 0.64 -0.1 100,263 - Ac3H11_274 0.64 +0.6 100,293 + Ac3H11_274 0.66 +0.5 100,293 + Ac3H11_274 0.66 +2.0 100,294 - Ac3H11_274 0.66 +1.3 100,294 - Ac3H11_274 0.66 +0.5 100,294 - Ac3H11_274 0.66 -1.4 100,304 + Ac3H11_274 0.67 -0.5 100,304 + Ac3H11_274 0.67 +0.2 100,304 + Ac3H11_274 0.67 -1.5 100,304 + Ac3H11_274 0.67 -0.2 100,304 + Ac3H11_274 0.67 +1.0 100,304 + Ac3H11_274 0.67 -0.5 100,304 + Ac3H11_274 0.67 -0.1 100,305 - Ac3H11_274 0.67 -0.5 100,305 - Ac3H11_274 0.67 -0.7 100,305 - Ac3H11_274 0.67 +0.3 100,305 - Ac3H11_274 0.67 -1.2 100,305 - Ac3H11_274 0.67 -0.0 100,305 - Ac3H11_274 0.67 -0.2 100,305 - Ac3H11_274 0.67 -0.8 100,305 - Ac3H11_274 0.67 +1.3 100,343 + Ac3H11_274 0.70 -0.4 100,343 + Ac3H11_274 0.70 -0.1 100,343 + Ac3H11_274 0.70 -1.8 100,343 + Ac3H11_274 0.70 -0.1 100,343 + Ac3H11_274 0.70 +0.5 100,343 + Ac3H11_274 0.70 +0.1 100,343 + Ac3H11_274 0.70 -2.0 100,343 + Ac3H11_274 0.70 +1.4 100,344 - Ac3H11_274 0.70 +0.4 100,344 - Ac3H11_274 0.70 +0.5 100,344 - Ac3H11_274 0.70 +0.4 100,357 + Ac3H11_274 0.71 -0.2 100,357 + Ac3H11_274 0.71 +0.5 100,357 + Ac3H11_274 0.71 +0.6 100,358 - Ac3H11_274 0.71 +0.5 100,361 + Ac3H11_274 0.72 -1.0 100,361 + Ac3H11_274 0.72 -1.7 100,361 + Ac3H11_274 0.72 +0.9 100,361 + Ac3H11_274 0.72 +0.5 100,361 + Ac3H11_274 0.72 +0.4 100,361 + Ac3H11_274 0.72 -1.1 100,361 + Ac3H11_274 0.72 -0.3 100,361 + Ac3H11_274 0.72 -0.1 100,361 + Ac3H11_274 0.72 -0.4 100,362 - Ac3H11_274 0.72 -0.7 100,362 - Ac3H11_274 0.72 +0.9 100,362 - Ac3H11_274 0.72 +0.4 100,362 - Ac3H11_274 0.72 +1.0 100,362 - Ac3H11_274 0.72 -1.1 100,424 + Ac3H11_274 0.77 +0.1 100,424 + Ac3H11_274 0.77 +0.2 100,424 + Ac3H11_274 0.77 -0.2 100,424 + Ac3H11_274 0.77 -0.3 100,424 + Ac3H11_274 0.77 +0.0 100,424 + Ac3H11_274 0.77 -0.9 100,424 + Ac3H11_274 0.77 -0.3 100,424 + Ac3H11_274 0.77 -0.4 100,424 + Ac3H11_274 0.77 -1.4 100,424 + Ac3H11_274 0.77 -0.8 100,424 + Ac3H11_274 0.77 -0.1 100,424 + Ac3H11_274 0.77 -0.7 100,424 + Ac3H11_274 0.77 -0.1 100,424 + Ac3H11_274 0.77 -0.3 100,424 + Ac3H11_274 0.77 -0.3 100,424 + Ac3H11_274 0.77 -0.1 100,424 + Ac3H11_274 0.77 -0.3 100,424 + Ac3H11_274 0.77 +0.4 100,424 + Ac3H11_274 0.77 +1.9 100,425 - Ac3H11_274 0.77 -0.6 100,425 - Ac3H11_274 0.77 -1.0 100,425 - Ac3H11_274 0.77 +0.7 100,425 - Ac3H11_274 0.77 +0.0 100,425 - Ac3H11_274 0.77 -0.3 100,425 - Ac3H11_274 0.77 -0.7 100,425 - Ac3H11_274 0.77 -1.6 100,425 - Ac3H11_274 0.77 +1.9 100,425 - Ac3H11_274 0.77 -1.0 100,425 - Ac3H11_274 0.77 +0.2 100,425 - Ac3H11_274 0.77 +0.2 100,425 - Ac3H11_274 0.77 +0.8 100,425 - Ac3H11_274 0.77 +0.2 100,425 - Ac3H11_274 0.77 -1.0 100,425 - Ac3H11_274 0.77 -0.8 100,586 + Ac3H11_274 0.90 +0.5 100,586 + Ac3H11_274 0.90 +0.6 100,586 + Ac3H11_274 0.90 -0.2 100,587 - Ac3H11_274 0.90 +0.8 100,587 - Ac3H11_274 0.90 +0.5 100,587 - Ac3H11_274 0.90 -2.8 100,592 + -1.1 100,592 + +1.1 100,592 + -0.2 100,593 - -0.9 100,593 - +0.1 100,593 - -0.9 100,593 - -0.2 100,593 - +0.3 100,593 - +1.5 100,593 - +0.5 100,610 + -0.1 100,610 + +0.7 100,610 + +0.3 100,610 + -1.4 100,610 + +0.5 100,610 + -0.7 100,611 - +2.6 100,611 - +0.6 100,611 - +1.7 100,611 - -0.3 100,611 - +0.8 100,611 - -1.3 100,611 - -1.3 100,611 - -0.1 100,611 - +0.3 100,611 - -0.0 100,611 - +0.0 100,611 - +0.8 100,611 - -1.9 100,615 + -0.4 100,625 + -1.5 100,625 + +0.7 100,625 + +0.2 100,625 + +1.2 100,626 - +0.1 100,626 - +1.0 100,626 - -2.8 100,626 - -0.8 100,831 + Ac3H11_275 0.63 +0.2 100,831 + Ac3H11_275 0.63 -1.0 100,831 + Ac3H11_275 0.63 -3.7 100,831 + Ac3H11_275 0.63 -0.6 100,832 - Ac3H11_275 0.64 +0.0 100,832 - Ac3H11_275 0.64 -1.7 100,832 - Ac3H11_275 0.64 +0.8 100,832 - Ac3H11_275 0.64 -1.7 100,832 - Ac3H11_275 0.64 +0.3 100,950 - +0.3 101,235 + Ac3H11_276 0.48 -1.3 101,235 + Ac3H11_276 0.48 -1.6 101,235 + Ac3H11_276 0.48 -1.5 101,235 + Ac3H11_276 0.48 -0.7 101,235 + Ac3H11_276 0.48 +0.9 101,235 + Ac3H11_276 0.48 -1.6 101,236 - Ac3H11_276 0.48 +1.2 101,236 - Ac3H11_276 0.48 +0.4 101,236 - Ac3H11_276 0.48 +1.2 101,236 - Ac3H11_276 0.48 -0.0 101,236 - Ac3H11_276 0.48 -1.1 101,236 - Ac3H11_276 0.48 +0.5 101,236 - Ac3H11_276 0.48 +0.4 101,236 - Ac3H11_276 0.48 -0.3 101,236 - Ac3H11_276 0.48 +0.6 101,236 - Ac3H11_276 0.48 -0.8 101,298 + Ac3H11_276 0.59 +2.0 101,298 + Ac3H11_276 0.59 +0.4 101,299 - Ac3H11_276 0.59 -0.3 101,299 - Ac3H11_276 0.59 +0.6 101,299 - Ac3H11_276 0.59 +1.0 101,409 + Ac3H11_276 0.79 +1.4 101,410 - Ac3H11_276 0.79 +0.6 101,519 + +0.0 101,519 + +0.1 101,523 + -0.8 101,523 + -1.5 101,523 + -1.2 101,523 + +1.2 101,523 + +0.5 101,523 + -3.1 101,523 + +0.2 101,523 + +0.2 101,523 + -1.9 101,523 + +0.3 101,524 - +1.6 101,524 - -0.4 101,524 - -0.0 101,524 - +0.3 101,524 - +0.6 101,524 - +3.1 101,524 - -1.6 101,524 - +0.6 101,524 - +1.1 101,524 - -0.2 101,524 - +1.1 101,524 - -0.6 101,524 - +0.0 101,524 - -0.8 101,536 + +1.5 101,536 + +0.6 101,579 + -0.4 101,579 + -0.6 101,634 + -0.2 101,666 + Ac3H11_277 0.12 +0.7 101,889 + Ac3H11_277 0.37 -0.5 101,889 + Ac3H11_277 0.37 -2.4 101,889 + Ac3H11_277 0.37 +1.0 101,892 + Ac3H11_277 0.37 +1.3 101,892 + Ac3H11_277 0.37 -0.3 101,892 + Ac3H11_277 0.37 -1.4 101,892 + Ac3H11_277 0.37 -0.8 101,892 + Ac3H11_277 0.37 -0.9 101,892 + Ac3H11_277 0.37 -0.2 101,973 + Ac3H11_277 0.46 -1.3 101,973 + Ac3H11_277 0.46 -2.0 101,973 + Ac3H11_277 0.46 -3.1 101,973 + Ac3H11_277 0.46 -1.5 101,973 + Ac3H11_277 0.46 -1.5 101,973 + Ac3H11_277 0.46 -1.5 102,106 + Ac3H11_277 0.61 -1.5 102,106 + Ac3H11_277 0.61 -0.4 102,106 + Ac3H11_277 0.61 +0.2 102,126 + Ac3H11_277 0.63 +0.5 102,126 + Ac3H11_277 0.63 -0.7 102,126 + Ac3H11_277 0.63 -0.0
Or see this region's nucleotide sequence