Experiment: A22 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_248 and Ac3H11_249 overlap by 13 nucleotides Ac3H11_249 and Ac3H11_250 overlap by 42 nucleotides
Ac3H11_248 - Ferrichrome-iron receptor, at 64,823 to 66,955
_248
Ac3H11_249 - hypothetical protein, at 66,943 to 67,128
_249
Ac3H11_250 - Ferrichrome-iron receptor, at 67,087 to 69,255
_250
Position (kb) 66
67
68 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 65.999 kb on + strand, within Ac3H11_248 at 65.999 kb on + strand, within Ac3H11_248 at 66.041 kb on + strand, within Ac3H11_248 at 66.041 kb on + strand, within Ac3H11_248 at 66.042 kb on - strand, within Ac3H11_248 at 66.042 kb on - strand, within Ac3H11_248 at 66.087 kb on + strand, within Ac3H11_248 at 66.200 kb on + strand, within Ac3H11_248 at 66.200 kb on + strand, within Ac3H11_248 at 66.201 kb on - strand, within Ac3H11_248 at 66.201 kb on - strand, within Ac3H11_248 at 66.674 kb on + strand, within Ac3H11_248 at 66.774 kb on - strand at 66.861 kb on - strand at 66.864 kb on - strand at 66.864 kb on - strand at 67.010 kb on + strand, within Ac3H11_249 at 67.011 kb on - strand, within Ac3H11_249 at 67.423 kb on + strand, within Ac3H11_250 at 67.424 kb on - strand, within Ac3H11_250 at 67.424 kb on - strand, within Ac3H11_250 at 67.424 kb on - strand, within Ac3H11_250 at 67.477 kb on + strand, within Ac3H11_250 at 67.478 kb on - strand, within Ac3H11_250 at 67.534 kb on + strand, within Ac3H11_250 at 67.582 kb on + strand, within Ac3H11_250 at 67.582 kb on + strand, within Ac3H11_250 at 67.583 kb on - strand, within Ac3H11_250 at 67.936 kb on + strand, within Ac3H11_250 at 67.937 kb on - strand, within Ac3H11_250 at 67.987 kb on + strand, within Ac3H11_250 at 67.987 kb on + strand, within Ac3H11_250 at 68.089 kb on + strand, within Ac3H11_250 at 68.101 kb on + strand, within Ac3H11_250 at 68.101 kb on + strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250 at 68.102 kb on - strand, within Ac3H11_250
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.025 mg/ml remove 65,999 + Ac3H11_248 0.55 -0.2 65,999 + Ac3H11_248 0.55 -1.7 66,041 + Ac3H11_248 0.57 -2.5 66,041 + Ac3H11_248 0.57 +0.4 66,042 - Ac3H11_248 0.57 -0.8 66,042 - Ac3H11_248 0.57 +0.4 66,087 + Ac3H11_248 0.59 +0.3 66,200 + Ac3H11_248 0.65 +0.6 66,200 + Ac3H11_248 0.65 -0.4 66,201 - Ac3H11_248 0.65 -0.6 66,201 - Ac3H11_248 0.65 +0.3 66,674 + Ac3H11_248 0.87 +0.7 66,774 - +0.2 66,861 - -0.6 66,864 - -0.1 66,864 - -0.1 67,010 + Ac3H11_249 0.36 +1.4 67,011 - Ac3H11_249 0.37 +0.2 67,423 + Ac3H11_250 0.15 +0.1 67,424 - Ac3H11_250 0.16 +0.2 67,424 - Ac3H11_250 0.16 -0.9 67,424 - Ac3H11_250 0.16 +0.2 67,477 + Ac3H11_250 0.18 +0.9 67,478 - Ac3H11_250 0.18 +0.3 67,534 + Ac3H11_250 0.21 -0.1 67,582 + Ac3H11_250 0.23 +0.4 67,582 + Ac3H11_250 0.23 +0.7 67,583 - Ac3H11_250 0.23 +0.1 67,936 + Ac3H11_250 0.39 +0.4 67,937 - Ac3H11_250 0.39 +1.1 67,987 + Ac3H11_250 0.41 +0.0 67,987 + Ac3H11_250 0.41 -3.5 68,089 + Ac3H11_250 0.46 -0.1 68,101 + Ac3H11_250 0.47 -1.0 68,101 + Ac3H11_250 0.47 +0.4 68,102 - Ac3H11_250 0.47 -0.2 68,102 - Ac3H11_250 0.47 +0.1 68,102 - Ac3H11_250 0.47 +1.0 68,102 - Ac3H11_250 0.47 -0.8 68,102 - Ac3H11_250 0.47 +0.1
Or see this region's nucleotide sequence