Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32385 and AZOBR_RS32390 overlap by 4 nucleotides AZOBR_RS32390 and AZOBR_RS32395 overlap by 4 nucleotides AZOBR_RS32395 and AZOBR_RS32400 are separated by 64 nucleotides
AZOBR_RS32385: AZOBR_RS32385 - FAD-dependent oxidoreductase, at 632,626 to 633,930
_RS32385
AZOBR_RS32390: AZOBR_RS32390 - amidohydrolase, at 633,927 to 635,126
_RS32390
AZOBR_RS32395: AZOBR_RS32395 - 2-amino-thiazoline-4-carboxylic acid hydrolase, at 635,123 to 635,611
_RS32395
AZOBR_RS32400: AZOBR_RS32400 - leucine/isoleucine/valine transporter ATP-binding subunit, at 635,676 to 636,374
_RS32400
Position (kb) 633
634
635
636 Strain fitness (log2 ratio) -2
-1
0
1 at 633.188 kb on + strand, within AZOBR_RS32385 at 633.189 kb on - strand, within AZOBR_RS32385 at 633.405 kb on + strand, within AZOBR_RS32385 at 633.977 kb on - strand at 634.016 kb on - strand at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.072 kb on + strand, within AZOBR_RS32390 at 634.073 kb on - strand, within AZOBR_RS32390 at 634.073 kb on - strand, within AZOBR_RS32390 at 634.073 kb on - strand, within AZOBR_RS32390 at 634.235 kb on - strand, within AZOBR_RS32390 at 634.235 kb on - strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.558 kb on + strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 634.559 kb on - strand, within AZOBR_RS32390 at 635.689 kb on + strand at 635.689 kb on + strand at 635.767 kb on + strand, within AZOBR_RS32400 at 635.767 kb on + strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400 at 635.768 kb on - strand, within AZOBR_RS32400
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 633,188 + AZOBR_RS32385 0.43 -0.1 633,189 - AZOBR_RS32385 0.43 +1.5 633,405 + AZOBR_RS32385 0.60 +0.4 633,977 - +0.7 634,016 - -0.8 634,072 + AZOBR_RS32390 0.12 +0.1 634,072 + AZOBR_RS32390 0.12 +0.1 634,072 + AZOBR_RS32390 0.12 +0.4 634,072 + AZOBR_RS32390 0.12 -2.7 634,072 + AZOBR_RS32390 0.12 +1.3 634,073 - AZOBR_RS32390 0.12 +0.4 634,073 - AZOBR_RS32390 0.12 +0.1 634,073 - AZOBR_RS32390 0.12 -0.9 634,235 - AZOBR_RS32390 0.26 +0.5 634,235 - AZOBR_RS32390 0.26 -0.6 634,558 + AZOBR_RS32390 0.53 -0.0 634,558 + AZOBR_RS32390 0.53 -0.0 634,558 + AZOBR_RS32390 0.53 +0.8 634,559 - AZOBR_RS32390 0.53 -0.1 634,559 - AZOBR_RS32390 0.53 +0.1 634,559 - AZOBR_RS32390 0.53 +0.2 635,689 + +0.3 635,689 + +0.9 635,767 + AZOBR_RS32400 0.13 -0.4 635,767 + AZOBR_RS32400 0.13 +0.0 635,768 - AZOBR_RS32400 0.13 +1.0 635,768 - AZOBR_RS32400 0.13 +0.3 635,768 - AZOBR_RS32400 0.13 -0.3 635,768 - AZOBR_RS32400 0.13 -0.1 635,768 - AZOBR_RS32400 0.13 -1.2 635,768 - AZOBR_RS32400 0.13 +0.4 635,768 - AZOBR_RS32400 0.13 +0.4 635,768 - AZOBR_RS32400 0.13 -0.1
Or see this region's nucleotide sequence