Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25380 and AZOBR_RS25385 overlap by 56 nucleotides AZOBR_RS25385 and AZOBR_RS25390 are separated by 675 nucleotides
AZOBR_RS25380: AZOBR_RS25380 - aminotransferase class V, at 748,346 to 750,238
_RS25380
AZOBR_RS25385: AZOBR_RS25385 - membrane protein, at 750,183 to 751,112
_RS25385
AZOBR_RS25390: AZOBR_RS25390 - transcriptional regulator, at 751,788 to 752,339
_RS25390
Position (kb) 750
751
752 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 749.374 kb on - strand, within AZOBR_RS25380 at 749.439 kb on + strand, within AZOBR_RS25380 at 749.440 kb on - strand, within AZOBR_RS25380 at 749.440 kb on - strand, within AZOBR_RS25380 at 749.775 kb on + strand, within AZOBR_RS25380 at 749.775 kb on + strand, within AZOBR_RS25380 at 749.776 kb on - strand, within AZOBR_RS25380 at 750.190 kb on + strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.196 kb on + strand at 750.196 kb on + strand at 750.196 kb on + strand at 750.196 kb on + strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.199 kb on + strand at 750.199 kb on + strand at 750.199 kb on + strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.265 kb on + strand at 750.265 kb on + strand at 750.266 kb on - strand at 750.266 kb on - strand at 750.280 kb on + strand, within AZOBR_RS25385 at 750.281 kb on - strand, within AZOBR_RS25385 at 750.841 kb on + strand, within AZOBR_RS25385 at 750.961 kb on + strand, within AZOBR_RS25385 at 750.961 kb on + strand, within AZOBR_RS25385 at 751.017 kb on + strand, within AZOBR_RS25385 at 751.018 kb on - strand, within AZOBR_RS25385 at 751.298 kb on + strand at 751.299 kb on - strand at 751.365 kb on + strand at 751.368 kb on - strand at 751.692 kb on - strand at 751.814 kb on - strand at 751.814 kb on - strand at 751.814 kb on - strand at 751.814 kb on - strand at 751.930 kb on + strand, within AZOBR_RS25390 at 751.931 kb on - strand, within AZOBR_RS25390 at 751.931 kb on - strand, within AZOBR_RS25390
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 749,374 - AZOBR_RS25380 0.54 +0.2 749,439 + AZOBR_RS25380 0.58 +0.6 749,440 - AZOBR_RS25380 0.58 +1.1 749,440 - AZOBR_RS25380 0.58 +2.2 749,775 + AZOBR_RS25380 0.75 -0.6 749,775 + AZOBR_RS25380 0.75 +0.4 749,776 - AZOBR_RS25380 0.76 +0.3 750,190 + -0.2 750,191 - -0.8 750,191 - +2.7 750,191 - +1.0 750,191 - -0.3 750,191 - -4.4 750,196 + +0.5 750,196 + +0.3 750,196 + +0.2 750,196 + +1.4 750,197 - +0.2 750,197 - -0.1 750,197 - -0.9 750,197 - +0.1 750,197 - -0.0 750,197 - +1.8 750,197 - -0.1 750,199 + -0.9 750,199 + +0.1 750,199 + +0.0 750,200 - -0.0 750,200 - +0.5 750,200 - +0.4 750,200 - +0.4 750,200 - +1.9 750,200 - +0.6 750,265 + +0.4 750,265 + -0.4 750,266 - -0.6 750,266 - -0.1 750,280 + AZOBR_RS25385 0.10 +0.2 750,281 - AZOBR_RS25385 0.11 +0.7 750,841 + AZOBR_RS25385 0.71 +0.6 750,961 + AZOBR_RS25385 0.84 +0.5 750,961 + AZOBR_RS25385 0.84 +0.9 751,017 + AZOBR_RS25385 0.90 +0.6 751,018 - AZOBR_RS25385 0.90 -0.6 751,298 + +0.1 751,299 - +0.7 751,365 + -0.1 751,368 - +0.4 751,692 - -0.1 751,814 - +0.8 751,814 - +0.1 751,814 - +0.4 751,814 - +0.2 751,930 + AZOBR_RS25390 0.26 +0.1 751,931 - AZOBR_RS25390 0.26 +0.1 751,931 - AZOBR_RS25390 0.26 +0.1
Or see this region's nucleotide sequence