Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13110

Experiment: nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 6 mM
2,941,276	+		ABZR86_RS13100	0.45	+1.1
2,941,277	-		ABZR86_RS13100	0.45	-0.1
2,941,277	-		ABZR86_RS13100	0.45	+0.4
2,941,277	-		ABZR86_RS13100	0.45	-0.1
2,941,277	-		ABZR86_RS13100	0.45	+0.6
2,941,292	+		ABZR86_RS13100	0.48	-0.7
2,941,616	-				-0.2
2,941,616	-				-0.1
2,941,648	+		ABZR86_RS13105	0.15	-0.2
2,941,648	+		ABZR86_RS13105	0.15	+0.1
2,941,648	+		ABZR86_RS13105	0.15	-0.5
2,941,648	+		ABZR86_RS13105	0.15	+0.5
2,941,649	-		ABZR86_RS13105	0.16	-0.0
2,941,649	-		ABZR86_RS13105	0.16	-0.1
2,941,684	+		ABZR86_RS13105	0.24	-0.4
2,941,685	-		ABZR86_RS13105	0.25	+0.9
2,941,685	-		ABZR86_RS13105	0.25	-0.2
2,941,691	-		ABZR86_RS13105	0.26	+0.2
2,941,738	+		ABZR86_RS13105	0.38	+0.2
2,941,738	+		ABZR86_RS13105	0.38	+0.1
2,941,738	+		ABZR86_RS13105	0.38	+0.2
2,941,739	-		ABZR86_RS13105	0.38	-0.9
2,941,739	-		ABZR86_RS13105	0.38	-0.2
2,941,739	-		ABZR86_RS13105	0.38	+0.1
2,941,822	+		ABZR86_RS13105	0.59	+0.0
2,941,822	+		ABZR86_RS13105	0.59	+0.2
2,941,822	+		ABZR86_RS13105	0.59	-0.4
2,941,823	-		ABZR86_RS13105	0.59	-0.4
2,941,823	-		ABZR86_RS13105	0.59	+0.6
2,941,823	-		ABZR86_RS13105	0.59	+0.7
2,941,847	+		ABZR86_RS13105	0.65	-0.1
2,941,848	-		ABZR86_RS13105	0.65	-0.1
2,941,874	-		ABZR86_RS13105	0.72	-0.7
2,941,874	-		ABZR86_RS13105	0.72	-0.4
2,942,062	+				-0.0
2,942,062	+				-0.7
2,942,062	+				+0.0
2,942,062	+				-0.2
2,942,062	+				+0.5
2,942,062	+				-0.3
2,942,062	+				+0.1
2,942,062	+				+0.3
2,942,063	-				+0.6
2,942,063	-				-0.2
2,942,063	-				-0.0
2,942,063	-				-0.0
2,942,063	-				-0.2
2,942,075	-				-0.9
2,942,075	-				+0.3
2,942,075	-				+0.1
2,942,542	-		ABZR86_RS13110	0.39	-0.3
2,942,712	+		ABZR86_RS13110	0.53	-1.1
2,942,712	+		ABZR86_RS13110	0.53	-0.1
2,942,712	+		ABZR86_RS13110	0.53	-0.6
2,942,712	+		ABZR86_RS13110	0.53	+0.4
2,942,712	+		ABZR86_RS13110	0.53	+0.3
2,942,712	+		ABZR86_RS13110	0.53	+0.1
2,942,713	-		ABZR86_RS13110	0.53	+0.2
2,942,713	-		ABZR86_RS13110	0.53	-0.1
2,942,766	+		ABZR86_RS13110	0.57	-0.8
2,942,766	+		ABZR86_RS13110	0.57	-0.0
2,942,886	+		ABZR86_RS13110	0.67	-1.0
2,942,887	-		ABZR86_RS13110	0.67	-0.4
2,943,172	+				+1.7
2,943,172	+				-1.2
2,943,173	-				+0.2
2,943,173	-				+0.1
2,943,316	+				+0.1
2,943,317	-				-0.1
2,943,324	-				+0.7
2,943,324	-				-0.2
2,943,324	-				+0.2
2,943,330	+				+0.4
2,943,378	+				-0.0
2,943,379	-				-0.5
2,943,380	+				+0.1
2,943,380	+				-0.1
2,943,380	+				-0.5
2,943,381	-				+0.2
2,943,433	+				-0.1
2,943,434	-				-0.2
2,943,528	+				-0.2
2,943,528	+				+0.2
2,943,528	+				-0.3
2,943,529	-				-0.5
2,943,529	-				+0.7
2,943,529	-				-0.6
2,943,592	+				+1.0
2,943,592	+				+1.2
2,943,592	+				-0.2
2,943,717	+		ABZR86_RS13115	0.15	+0.2
2,943,717	+		ABZR86_RS13115	0.15	+0.0
2,943,717	+		ABZR86_RS13115	0.15	+0.3
2,943,717	+		ABZR86_RS13115	0.15	+0.3
2,943,718	-		ABZR86_RS13115	0.15	-0.1
2,943,718	-		ABZR86_RS13115	0.15	+0.0
2,943,718	-		ABZR86_RS13115	0.15	-0.3
2,943,763	-		ABZR86_RS13115	0.18	+0.5
2,943,840	+		ABZR86_RS13115	0.22	+0.7
2,943,841	-		ABZR86_RS13115	0.22	+0.2
2,943,895	+		ABZR86_RS13115	0.26	-1.0
2,943,895	+		ABZR86_RS13115	0.26	+0.4
2,943,896	-		ABZR86_RS13115	0.26	-0.2
2,943,896	-		ABZR86_RS13115	0.26	-0.1
2,943,896	-		ABZR86_RS13115	0.26	-0.6
2,943,896	-		ABZR86_RS13115	0.26	+0.0
2,944,083	+		ABZR86_RS13115	0.36	-0.5
2,944,149	+		ABZR86_RS13115	0.40	+1.2
2,944,149	+		ABZR86_RS13115	0.40	+0.1
2,944,150	-		ABZR86_RS13115	0.40	-0.5