Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS11000

Experiment: nitrite 6 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 6 mM
2,442,052	+		ABZR86_RS10990	0.73	+0.6
2,442,052	+		ABZR86_RS10990	0.73	-0.6
2,442,053	-		ABZR86_RS10990	0.74	-1.1
2,442,053	-		ABZR86_RS10990	0.74	+0.8
2,442,053	-		ABZR86_RS10990	0.74	-0.5
2,442,053	-		ABZR86_RS10990	0.74	-0.4
2,442,053	-		ABZR86_RS10990	0.74	-0.4
2,442,053	-		ABZR86_RS10990	0.74	-0.4
2,442,053	-		ABZR86_RS10990	0.74	-0.4
2,442,289	+				-0.2
2,442,316	-				+0.2
2,442,351	+				-0.1
2,442,351	+				+0.5
2,442,352	-				+0.2
2,442,352	-				-0.1
2,442,513	+		ABZR86_RS10995	0.66	+0.1
2,442,577	-				-0.9
2,442,637	+				+0.2
2,442,637	+				+0.6
2,442,638	-				+0.1
2,442,638	-				-1.0
2,442,638	-				-1.4
2,442,778	+		ABZR86_RS11000	0.18	-0.0
2,442,778	+		ABZR86_RS11000	0.18	+0.5
2,442,779	-		ABZR86_RS11000	0.18	+0.3
2,442,779	-		ABZR86_RS11000	0.18	+0.1
2,442,888	-		ABZR86_RS11000	0.30	-0.8
2,442,888	-		ABZR86_RS11000	0.30	+0.0
2,443,060	+		ABZR86_RS11000	0.48	+0.1
2,443,060	+		ABZR86_RS11000	0.48	+0.6
2,443,060	+		ABZR86_RS11000	0.48	-0.2
2,443,061	-		ABZR86_RS11000	0.48	+0.2
2,443,061	-		ABZR86_RS11000	0.48	+0.9
2,443,061	-		ABZR86_RS11000	0.48	+0.1
2,443,063	+		ABZR86_RS11000	0.48	-0.1
2,443,063	+		ABZR86_RS11000	0.48	+0.0
2,443,063	+		ABZR86_RS11000	0.48	-0.3
2,443,063	+		ABZR86_RS11000	0.48	-0.1
2,443,064	-		ABZR86_RS11000	0.48	-0.1
2,443,064	-		ABZR86_RS11000	0.48	+0.2
2,443,064	-		ABZR86_RS11000	0.48	-0.6
2,443,069	+		ABZR86_RS11000	0.49	+0.0
2,443,105	+		ABZR86_RS11000	0.53	+0.1
2,443,106	-		ABZR86_RS11000	0.53	-0.0
2,443,291	+		ABZR86_RS11000	0.72	+0.2
2,443,291	+		ABZR86_RS11000	0.72	-0.2
2,443,291	+		ABZR86_RS11000	0.72	+0.4
2,443,291	+		ABZR86_RS11000	0.72	-1.2
2,443,291	+		ABZR86_RS11000	0.72	+0.1
2,443,292	-		ABZR86_RS11000	0.72	-0.3
2,443,346	+		ABZR86_RS11000	0.78	-1.4
2,443,407	-		ABZR86_RS11000	0.84	+0.8
2,443,407	-		ABZR86_RS11000	0.84	-0.9
2,443,407	-		ABZR86_RS11000	0.84	-0.6
2,443,708	+				-0.2
2,443,708	+				-0.5
2,443,708	+				+0.1
2,443,709	-				+0.4
2,443,709	-				-0.6
2,443,719	+				+0.2
2,443,719	+				+0.2
2,443,720	-				+0.2
2,443,947	+		ABZR86_RS11005	0.17	+0.7
2,444,067	+		ABZR86_RS11005	0.22	+0.9
2,444,067	+		ABZR86_RS11005	0.22	+0.6
2,444,068	-		ABZR86_RS11005	0.22	-0.4
2,444,118	+		ABZR86_RS11005	0.24	-0.2
2,444,118	+		ABZR86_RS11005	0.24	+0.3
2,444,193	+		ABZR86_RS11005	0.27	+0.5
2,444,193	+		ABZR86_RS11005	0.27	+0.3
2,444,194	-		ABZR86_RS11005	0.27	+0.7
2,444,194	-		ABZR86_RS11005	0.27	+1.4
2,444,194	-		ABZR86_RS11005	0.27	+0.4
2,444,194	-		ABZR86_RS11005	0.27	+0.4
2,444,194	-		ABZR86_RS11005	0.27	-0.1
2,444,194	-		ABZR86_RS11005	0.27	+0.0
2,444,269	-		ABZR86_RS11005	0.30	+0.2
2,444,511	+		ABZR86_RS11005	0.40	+0.6
2,444,511	+		ABZR86_RS11005	0.40	+0.3
2,444,511	+		ABZR86_RS11005	0.40	-0.2
2,444,512	-		ABZR86_RS11005	0.41	-0.1
2,444,512	-		ABZR86_RS11005	0.41	+0.2
2,444,512	-		ABZR86_RS11005	0.41	-0.1
2,444,512	-		ABZR86_RS11005	0.41	+0.3
2,444,512	-		ABZR86_RS11005	0.41	-0.1