Experiment: nitrite 6 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03560 and ABZR86_RS03565 overlap by 4 nucleotides ABZR86_RS03565 and ABZR86_RS03570 are separated by 291 nucleotides ABZR86_RS03570 and ABZR86_RS03575 overlap by 4 nucleotides ABZR86_RS03575 and ABZR86_RS03580 overlap by 1 nucleotides
ABZR86_RS03560: ABZR86_RS03560 - molybdenum cofactor guanylyltransferase, at 760,862 to 761,434
_RS03560
ABZR86_RS03565: ABZR86_RS03565 - hypothetical protein, at 761,431 to 761,775
_RS03565
ABZR86_RS03570: ABZR86_RS03570 - extracellular solute-binding protein, at 762,067 to 762,978
_RS03570
ABZR86_RS03575: ABZR86_RS03575 - ABC transporter permease subunit, at 762,975 to 763,757
_RS03575
ABZR86_RS03580: ABZR86_RS03580 - ABC transporter ATP-binding protein, at 763,757 to 764,752
_RS03580
Position (kb) 762
763 Strain fitness (log2 ratio) -2
-1
0
1 at 761.402 kb on - strand at 761.999 kb on + strand at 761.999 kb on + strand at 761.999 kb on + strand at 762.000 kb on - strand at 762.000 kb on - strand at 762.406 kb on + strand, within ABZR86_RS03570 at 762.406 kb on + strand, within ABZR86_RS03570 at 762.406 kb on + strand, within ABZR86_RS03570 at 762.406 kb on + strand, within ABZR86_RS03570 at 762.406 kb on + strand, within ABZR86_RS03570 at 762.469 kb on + strand, within ABZR86_RS03570 at 762.470 kb on - strand, within ABZR86_RS03570 at 762.470 kb on - strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.571 kb on + strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.572 kb on - strand, within ABZR86_RS03570 at 762.574 kb on + strand, within ABZR86_RS03570 at 762.574 kb on + strand, within ABZR86_RS03570 at 762.574 kb on + strand, within ABZR86_RS03570 at 762.575 kb on - strand, within ABZR86_RS03570 at 762.575 kb on - strand, within ABZR86_RS03570 at 762.575 kb on - strand, within ABZR86_RS03570 at 762.848 kb on - strand, within ABZR86_RS03570 at 763.146 kb on + strand, within ABZR86_RS03575 at 763.147 kb on - strand, within ABZR86_RS03575 at 763.305 kb on + strand, within ABZR86_RS03575 at 763.305 kb on + strand, within ABZR86_RS03575 at 763.305 kb on + strand, within ABZR86_RS03575 at 763.305 kb on + strand, within ABZR86_RS03575 at 763.305 kb on + strand, within ABZR86_RS03575 at 763.305 kb on + strand, within ABZR86_RS03575 at 763.305 kb on + strand, within ABZR86_RS03575 at 763.306 kb on - strand, within ABZR86_RS03575 at 763.306 kb on - strand, within ABZR86_RS03575 at 763.306 kb on - strand, within ABZR86_RS03575 at 763.306 kb on - strand, within ABZR86_RS03575 at 763.395 kb on + strand, within ABZR86_RS03575 at 763.395 kb on + strand, within ABZR86_RS03575 at 763.396 kb on - strand, within ABZR86_RS03575 at 763.396 kb on - strand, within ABZR86_RS03575 at 763.410 kb on + strand, within ABZR86_RS03575 at 763.411 kb on - strand, within ABZR86_RS03575 at 763.411 kb on - strand, within ABZR86_RS03575 at 763.411 kb on - strand, within ABZR86_RS03575 at 763.413 kb on + strand, within ABZR86_RS03575 at 763.413 kb on + strand, within ABZR86_RS03575 at 763.413 kb on + strand, within ABZR86_RS03575 at 763.413 kb on + strand, within ABZR86_RS03575 at 763.413 kb on + strand, within ABZR86_RS03575 at 763.414 kb on - strand, within ABZR86_RS03575 at 763.414 kb on - strand, within ABZR86_RS03575 at 763.414 kb on - strand, within ABZR86_RS03575 at 763.414 kb on - strand, within ABZR86_RS03575 at 763.486 kb on - strand, within ABZR86_RS03575 at 763.609 kb on - strand, within ABZR86_RS03575 at 763.609 kb on - strand, within ABZR86_RS03575 at 763.609 kb on - strand, within ABZR86_RS03575 at 763.609 kb on - strand, within ABZR86_RS03575 at 763.674 kb on + strand, within ABZR86_RS03575 at 763.674 kb on + strand, within ABZR86_RS03575 at 763.943 kb on + strand, within ABZR86_RS03580 at 763.943 kb on + strand, within ABZR86_RS03580
Per-strain Table
Position Strand Gene LocusTag Fraction nitrite 6 mM remove 761,402 - +0.2 761,999 + -0.8 761,999 + -0.4 761,999 + -0.3 762,000 - -1.6 762,000 - -0.9 762,406 + ABZR86_RS03570 0.37 +0.4 762,406 + ABZR86_RS03570 0.37 +0.3 762,406 + ABZR86_RS03570 0.37 +0.3 762,406 + ABZR86_RS03570 0.37 -0.7 762,406 + ABZR86_RS03570 0.37 -0.3 762,469 + ABZR86_RS03570 0.44 -0.2 762,470 - ABZR86_RS03570 0.44 +0.1 762,470 - ABZR86_RS03570 0.44 -0.5 762,571 + ABZR86_RS03570 0.55 +0.1 762,571 + ABZR86_RS03570 0.55 -0.2 762,571 + ABZR86_RS03570 0.55 -0.5 762,571 + ABZR86_RS03570 0.55 +0.5 762,571 + ABZR86_RS03570 0.55 -0.5 762,571 + ABZR86_RS03570 0.55 -0.5 762,571 + ABZR86_RS03570 0.55 +0.3 762,571 + ABZR86_RS03570 0.55 -0.3 762,572 - ABZR86_RS03570 0.55 +0.2 762,572 - ABZR86_RS03570 0.55 -1.5 762,572 - ABZR86_RS03570 0.55 +0.2 762,572 - ABZR86_RS03570 0.55 +0.2 762,572 - ABZR86_RS03570 0.55 -0.0 762,572 - ABZR86_RS03570 0.55 -0.1 762,572 - ABZR86_RS03570 0.55 +0.2 762,572 - ABZR86_RS03570 0.55 -1.0 762,572 - ABZR86_RS03570 0.55 +0.0 762,572 - ABZR86_RS03570 0.55 -0.3 762,574 + ABZR86_RS03570 0.56 -0.9 762,574 + ABZR86_RS03570 0.56 -0.5 762,574 + ABZR86_RS03570 0.56 -0.3 762,575 - ABZR86_RS03570 0.56 -0.3 762,575 - ABZR86_RS03570 0.56 +0.2 762,575 - ABZR86_RS03570 0.56 +0.0 762,848 - ABZR86_RS03570 0.86 -0.2 763,146 + ABZR86_RS03575 0.22 +0.1 763,147 - ABZR86_RS03575 0.22 -0.2 763,305 + ABZR86_RS03575 0.42 +0.0 763,305 + ABZR86_RS03575 0.42 +0.1 763,305 + ABZR86_RS03575 0.42 -0.3 763,305 + ABZR86_RS03575 0.42 +0.4 763,305 + ABZR86_RS03575 0.42 +0.3 763,305 + ABZR86_RS03575 0.42 -0.4 763,305 + ABZR86_RS03575 0.42 +0.6 763,306 - ABZR86_RS03575 0.42 +0.3 763,306 - ABZR86_RS03575 0.42 -2.4 763,306 - ABZR86_RS03575 0.42 -0.1 763,306 - ABZR86_RS03575 0.42 +0.5 763,395 + ABZR86_RS03575 0.54 +0.1 763,395 + ABZR86_RS03575 0.54 +0.0 763,396 - ABZR86_RS03575 0.54 -0.0 763,396 - ABZR86_RS03575 0.54 +0.2 763,410 + ABZR86_RS03575 0.56 +0.3 763,411 - ABZR86_RS03575 0.56 -0.3 763,411 - ABZR86_RS03575 0.56 +0.2 763,411 - ABZR86_RS03575 0.56 +0.1 763,413 + ABZR86_RS03575 0.56 +0.5 763,413 + ABZR86_RS03575 0.56 -0.3 763,413 + ABZR86_RS03575 0.56 +0.8 763,413 + ABZR86_RS03575 0.56 -0.0 763,413 + ABZR86_RS03575 0.56 -0.3 763,414 - ABZR86_RS03575 0.56 +0.1 763,414 - ABZR86_RS03575 0.56 -0.7 763,414 - ABZR86_RS03575 0.56 +1.0 763,414 - ABZR86_RS03575 0.56 -0.4 763,486 - ABZR86_RS03575 0.65 +0.5 763,609 - ABZR86_RS03575 0.81 +0.3 763,609 - ABZR86_RS03575 0.81 +0.0 763,609 - ABZR86_RS03575 0.81 +0.4 763,609 - ABZR86_RS03575 0.81 -0.4 763,674 + ABZR86_RS03575 0.89 -0.3 763,674 + ABZR86_RS03575 0.89 +0.1 763,943 + ABZR86_RS03580 0.19 -0.8 763,943 + ABZR86_RS03580 0.19 -0.1
Or see this region's nucleotide sequence