Experiment: MoYLS4 with benzoic 0.8 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0239 and DvMF_0240 are separated by 245 nucleotides DvMF_0240 and DvMF_0241 are separated by 87 nucleotides
DvMF_0239: DvMF_0239 - Beta tubulin, autoregulation binding site (RefSeq), at 269,193 to 271,886
_0239
DvMF_0240: DvMF_0240 - hypothetical protein (RefSeq), at 272,132 to 272,500
_0240
DvMF_0241: DvMF_0241 - major facilitator superfamily MFS_1 (RefSeq), at 272,588 to 273,805
_0241
Position (kb) 272
273 Strain fitness (log2 ratio) -1
0
1 at 271.134 kb on + strand, within DvMF_0239 at 271.195 kb on - strand, within DvMF_0239 at 271.198 kb on + strand, within DvMF_0239 at 271.261 kb on - strand, within DvMF_0239 at 271.374 kb on + strand, within DvMF_0239 at 271.489 kb on + strand, within DvMF_0239 at 271.586 kb on - strand, within DvMF_0239 at 271.683 kb on + strand at 271.725 kb on + strand at 271.796 kb on + strand at 271.796 kb on + strand at 271.796 kb on + strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.804 kb on - strand at 271.855 kb on + strand at 271.863 kb on - strand at 271.869 kb on + strand at 271.869 kb on + strand at 272.028 kb on - strand at 272.182 kb on - strand, within DvMF_0240 at 272.396 kb on + strand, within DvMF_0240 at 272.396 kb on + strand, within DvMF_0240 at 272.636 kb on - strand at 272.656 kb on + strand at 272.800 kb on - strand, within DvMF_0241 at 273.113 kb on - strand, within DvMF_0241 at 273.128 kb on + strand, within DvMF_0241 at 273.136 kb on - strand, within DvMF_0241 at 273.268 kb on + strand, within DvMF_0241 at 273.359 kb on - strand, within DvMF_0241
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with benzoic 0.8 mg/ml remove 271,134 + DvMF_0239 0.72 -0.4 271,195 - DvMF_0239 0.74 -0.0 271,198 + DvMF_0239 0.74 -0.4 271,261 - DvMF_0239 0.77 -0.5 271,374 + DvMF_0239 0.81 -0.3 271,489 + DvMF_0239 0.85 -0.4 271,586 - DvMF_0239 0.89 -0.1 271,683 + -0.2 271,725 + -1.3 271,796 + -0.3 271,796 + -0.2 271,796 + -0.4 271,804 - -0.6 271,804 - -0.3 271,804 - -0.1 271,804 - -0.4 271,855 + -0.8 271,863 - -0.4 271,869 + -0.1 271,869 + -0.2 272,028 - -0.3 272,182 - DvMF_0240 0.14 -0.5 272,396 + DvMF_0240 0.72 +0.0 272,396 + DvMF_0240 0.72 -0.6 272,636 - -0.3 272,656 + -0.4 272,800 - DvMF_0241 0.17 -0.7 273,113 - DvMF_0241 0.43 -0.1 273,128 + DvMF_0241 0.44 -0.3 273,136 - DvMF_0241 0.45 -0.3 273,268 + DvMF_0241 0.56 +0.1 273,359 - DvMF_0241 0.63 +0.0
Or see this region's nucleotide sequence