Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03777

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
3,942,515	+				-1.3
3,942,515	+				+1.5
3,942,518	-				-0.5
3,942,521	+				-0.4
3,942,521	+				-0.1
3,942,625	+		CCNA_03775	0.26	-1.1
3,942,649	-		CCNA_03775	0.32	+0.9
3,942,654	-		CCNA_03775	0.34	-0.7
3,942,698	+		CCNA_03775	0.45	-1.0
3,942,698	+		CCNA_03775	0.45	-1.9
3,942,698	+		CCNA_03775	0.45	-0.6
3,942,712	+		CCNA_03775	0.49	+1.2
3,942,712	+		CCNA_03775	0.49	-1.5
3,942,712	+		CCNA_03775	0.49	-1.0
3,942,713	-		CCNA_03775	0.49	-1.3
3,942,713	-		CCNA_03775	0.49	-1.3
3,942,713	-		CCNA_03775	0.49	-1.7
3,942,718	-		CCNA_03775	0.50	-0.9
3,942,720	-		CCNA_03775	0.51	-0.2
3,942,733	+		CCNA_03775	0.54	-0.6
3,942,733	+		CCNA_03775	0.54	+0.2
3,942,733	+		CCNA_03775	0.54	-2.3
3,942,741	-		CCNA_03775	0.56	-1.7
3,942,741	-		CCNA_03775	0.56	+2.3
3,942,741	-		CCNA_03775	0.56	+1.2
3,942,746	-		CCNA_03775	0.58	-0.1
3,942,772	+		CCNA_03775	0.64	-0.2
3,942,794	+		CCNA_03775	0.70	-1.2
3,942,802	-		CCNA_03775	0.72	+1.4
3,942,802	-		CCNA_03775	0.72	-0.5
3,942,812	+		CCNA_03775	0.75	+0.4
3,942,910	-				-0.5
3,942,946	+				-0.5
3,942,970	+		CCNA_03776	0.11	-0.2
3,942,982	-		CCNA_03776	0.14	-1.0
3,943,003	-		CCNA_03776	0.17	-2.8
3,943,021	+		CCNA_03776	0.21	-2.2
3,943,027	-		CCNA_03776	0.22	-0.9
3,943,047	-		CCNA_03776	0.26	-0.9
3,943,064	+		CCNA_03776	0.29	-1.6
3,943,074	+		CCNA_03776	0.31	-1.0
3,943,082	-		CCNA_03776	0.32	-1.1
3,943,093	+		CCNA_03776	0.34	+1.7
3,943,093	+		CCNA_03776	0.34	-2.7
3,943,093	+		CCNA_03776	0.34	-1.2
3,943,098	-		CCNA_03776	0.35	-1.7
3,943,099	-		CCNA_03776	0.35	+2.3
3,943,184	+		CCNA_03776	0.51	-2.2
3,943,184	-		CCNA_03776	0.51	-1.8
3,943,206	-		CCNA_03776	0.55	-0.1
3,943,229	-		CCNA_03776	0.59	-1.4
3,943,231	+		CCNA_03776	0.60	+0.2
3,943,234	-		CCNA_03776	0.60	-1.1
3,943,234	-		CCNA_03776	0.60	-0.6
3,943,234	-		CCNA_03776	0.60	-0.9
3,943,234	-		CCNA_03776	0.60	-1.9
3,943,244	-		CCNA_03776	0.62	+0.3
3,943,244	-		CCNA_03776	0.62	-0.3
3,943,266	+		CCNA_03776	0.66	-1.1
3,943,274	-		CCNA_03776	0.68	-1.6
3,943,274	-		CCNA_03776	0.68	+2.3
3,943,326	+		CCNA_03776	0.77	-0.5
3,943,326	+		CCNA_03776	0.77	+0.5
3,943,326	+		CCNA_03776	0.77	-1.0
3,943,326	+		CCNA_03776	0.77	-2.2
3,943,331	+		CCNA_03776	0.78	-0.4
3,943,334	-		CCNA_03776	0.79	-1.4
3,943,334	-		CCNA_03776	0.79	-2.3
3,943,346	+		CCNA_03776	0.81	-2.0
3,943,377	-		CCNA_03776	0.87	-1.0
3,943,472	+				+0.2
3,943,472	+				-2.0
3,943,496	-				+0.9
3,943,505	+				-1.0
3,943,505	+				+0.1
3,943,522	+				+0.7
3,943,553	+				-1.6
3,943,641	+		CCNA_03777	0.17	+0.9
3,943,662	-		CCNA_03777	0.19	-0.7
3,943,665	+		CCNA_03777	0.19	-0.0
3,943,665	+		CCNA_03777	0.19	-1.8
3,943,665	+		CCNA_03777	0.19	+1.1
3,943,668	-		CCNA_03777	0.20	-1.0
3,943,668	-		CCNA_03777	0.20	-0.4
3,943,673	-		CCNA_03777	0.20	-0.3
3,943,686	+		CCNA_03777	0.21	-1.3
3,943,721	+		CCNA_03777	0.25	-0.5
3,943,723	+		CCNA_03777	0.25	-1.2
3,943,729	-		CCNA_03777	0.25	-2.5
3,943,729	-		CCNA_03777	0.25	-1.5
3,943,729	-		CCNA_03777	0.25	+0.5
3,943,747	+		CCNA_03777	0.27	-0.8
3,943,768	-		CCNA_03777	0.29	-1.0
3,943,770	-		CCNA_03777	0.29	+0.1
3,943,787	+		CCNA_03777	0.31	+0.8
3,943,792	+		CCNA_03777	0.31	-1.3
3,943,800	-		CCNA_03777	0.32	-1.7
3,943,870	+		CCNA_03777	0.39	+2.0
3,943,878	-		CCNA_03777	0.40	+0.7
3,943,883	-		CCNA_03777	0.40	+0.9
3,943,883	-		CCNA_03777	0.40	-0.7
3,943,884	-		CCNA_03777	0.40	+1.3
3,943,923	-		CCNA_03777	0.44	+0.7
3,944,050	+		CCNA_03777	0.56	-0.8
3,944,094	+		CCNA_03777	0.60	-2.1
3,944,099	+		CCNA_03777	0.60	-0.5
3,944,099	+		CCNA_03777	0.60	+0.8
3,944,102	-		CCNA_03777	0.61	-0.4
3,944,102	-		CCNA_03777	0.61	-1.0
3,944,107	-		CCNA_03777	0.61	+0.4
3,944,112	-		CCNA_03777	0.62	-0.6
3,944,118	+		CCNA_03777	0.62	-1.0
3,944,132	+		CCNA_03777	0.64	+0.6
3,944,177	+				+2.7
3,944,182	+		CCNA_03777	0.68	+0.8
3,944,190	-		CCNA_03777	0.69	+0.5
3,944,212	-		CCNA_03777	0.71	+1.2
3,944,212	-		CCNA_03777	0.71	+1.7
3,944,221	-		CCNA_03777	0.72	+1.1
3,944,253	+		CCNA_03777	0.75	+1.8
3,944,253	+		CCNA_03777	0.75	-2.3
3,944,261	-		CCNA_03777	0.76	+0.7
3,944,261	-		CCNA_03777	0.76	+0.1
3,944,261	-		CCNA_03777	0.76	+2.4
3,944,298	+		CCNA_03777	0.79	-0.1
3,944,306	-		CCNA_03777	0.80	+0.5
3,944,333	-		CCNA_03777	0.83	+0.2
3,944,353	+		CCNA_03777	0.85	+1.0
3,944,361	+		CCNA_03777	0.85	+1.5
3,944,362	-		CCNA_03777	0.85	+1.3
3,944,369	-		CCNA_03777	0.86	-0.9
3,944,393	-		CCNA_03777	0.88	-0.4
3,944,405	-		CCNA_03777	0.90	-0.7
3,944,420	-				-0.0
3,944,420	-				-1.2
3,944,420	-				+0.1
3,944,452	-				-0.0
3,944,473	-				+2.1
3,944,478	+				-1.3
3,944,478	-				+1.0
3,944,492	-				-1.0
3,944,498	+				-1.0
3,944,499	+				-0.4
3,944,526	+				-1.3
3,944,536	+				-1.6
3,944,547	+				-1.4
3,944,555	-				-0.9
3,944,593	-				+2.1
3,944,655	+				-0.9
3,944,655	+				-0.9
3,944,664	+				-0.5
3,944,791	+				-2.6
3,944,839	+		CCNA_03778	0.16	-0.6
3,944,930	+		CCNA_03778	0.28	-0.6
3,944,946	-		CCNA_03778	0.30	+1.3
3,945,028	+		CCNA_03778	0.41	+0.9
3,945,028	+		CCNA_03778	0.41	-0.6
3,945,028	+		CCNA_03778	0.41	-0.4
3,945,036	-		CCNA_03778	0.42	-0.7
3,945,084	+		CCNA_03778	0.49	+0.1
3,945,159	+		CCNA_03778	0.59	-0.8
3,945,203	+		CCNA_03778	0.65	-0.4
3,945,237	+		CCNA_03778	0.69	+3.7
3,945,325	+		CCNA_03778	0.81	-1.6
3,945,417	+				-0.1
3,945,497	+				-0.6