Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03651

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
3,807,736	+		CCNA_03649	0.75	-0.8
3,807,757	-		CCNA_03649	0.77	-0.0
3,807,772	-		CCNA_03649	0.78	-0.2
3,807,779	+		CCNA_03649	0.79	-1.1
3,807,779	+		CCNA_03649	0.79	-0.4
3,807,782	-		CCNA_03649	0.79	-1.9
3,807,816	+		CCNA_03649	0.83	-0.2
3,807,897	+				-1.6
3,807,910	+				-0.7
3,807,910	+				-2.5
3,807,921	+				-1.7
3,807,921	+				-1.5
3,807,928	+				+2.4
3,807,929	-				-0.5
3,807,929	-				-0.3
3,807,972	-				+0.5
3,807,986	-				-2.2
3,808,088	+		CCNA_03650	0.12	-0.4
3,808,202	-		CCNA_03650	0.27	+1.4
3,808,299	+		CCNA_03650	0.41	+0.9
3,808,429	+		CCNA_03650	0.58	+0.7
3,808,513	-		CCNA_03650	0.70	+0.7
3,808,569	+		CCNA_03650	0.78	+0.4
3,808,569	+		CCNA_03650	0.78	+0.9
3,808,719	-				+3.3
3,808,725	+				-1.8
3,808,733	-				-1.2
3,808,823	+				+3.2
3,808,846	+				+3.2
3,808,867	+				+3.6
3,808,875	-				+3.7
3,809,015	+				+0.4
3,809,023	-				+2.0
3,809,135	+		CCNA_03651	0.14	-1.2
3,809,135	+		CCNA_03651	0.14	+2.6
3,809,206	+		CCNA_03651	0.16	+2.6
3,809,206	+		CCNA_03651	0.16	+4.4
3,809,206	+		CCNA_03651	0.16	+1.3
3,809,229	-		CCNA_03651	0.17	+0.7
3,809,231	+		CCNA_03651	0.17	+0.2
3,809,231	+		CCNA_03651	0.17	+2.5
3,809,247	+		CCNA_03651	0.17	+3.4
3,809,286	+		CCNA_03651	0.19	+0.9
3,809,288	+		CCNA_03651	0.19	+1.9
3,809,288	+		CCNA_03651	0.19	+2.6
3,809,296	+		CCNA_03651	0.19	+1.2
3,809,296	+		CCNA_03651	0.19	+2.9
3,809,296	+		CCNA_03651	0.19	+1.4
3,809,296	+		CCNA_03651	0.19	+2.6
3,809,296	+		CCNA_03651	0.19	+2.3
3,809,296	-		CCNA_03651	0.19	+0.1
3,809,313	-		CCNA_03651	0.20	-0.1
3,809,352	-		CCNA_03651	0.21	+1.1
3,809,352	-		CCNA_03651	0.21	+0.9
3,809,365	+		CCNA_03651	0.21	+3.6
3,809,440	-		CCNA_03651	0.24	+0.5
3,809,499	-		CCNA_03651	0.26	-0.8
3,809,510	+		CCNA_03651	0.26	+3.6
3,809,524	-		CCNA_03651	0.27	+1.7
3,809,583	-		CCNA_03651	0.29	+1.7
3,809,646	-		CCNA_03651	0.31	+2.4
3,809,746	+		CCNA_03651	0.34	+1.7
3,809,846	+		CCNA_03651	0.37	+2.1
3,809,860	+		CCNA_03651	0.38	+1.2
3,809,871	+		CCNA_03651	0.38	+2.3
3,809,871	+		CCNA_03651	0.38	+1.4
3,809,891	+		CCNA_03651	0.39	+2.9
3,809,900	-		CCNA_03651	0.39	+1.1
3,809,900	-		CCNA_03651	0.39	+2.7
3,809,922	+		CCNA_03651	0.40	+3.8
3,809,977	-		CCNA_03651	0.42	+3.3
3,810,008	+		CCNA_03651	0.43	+2.9
3,810,032	-		CCNA_03651	0.44	+3.1
3,810,060	-		CCNA_03651	0.45	+2.2
3,810,107	-		CCNA_03651	0.46	+2.8
3,810,107	-		CCNA_03651	0.46	+2.8
3,810,166	+		CCNA_03651	0.48	+3.6
3,810,191	-		CCNA_03651	0.49	+4.4
3,810,255	+		CCNA_03651	0.51	+2.2
3,810,255	+		CCNA_03651	0.51	+1.1
3,810,255	+		CCNA_03651	0.51	+0.5
3,810,266	+		CCNA_03651	0.51	+0.2
3,810,268	-		CCNA_03651	0.51	+2.8
3,810,297	+		CCNA_03651	0.52	+1.6
3,810,326	-		CCNA_03651	0.53	+1.2
3,810,395	-		CCNA_03651	0.56	+2.5
3,810,395	-		CCNA_03651	0.56	+0.8
3,810,456	-		CCNA_03651	0.58	+3.7
3,810,525	+		CCNA_03651	0.60	+2.4
3,810,644	-		CCNA_03651	0.64	+0.7
3,810,645	-		CCNA_03651	0.64	+0.9
3,810,695	+		CCNA_03651	0.66	+3.1
3,810,695	+		CCNA_03651	0.66	+3.2
3,810,745	+		CCNA_03651	0.67	+3.6
3,810,781	+		CCNA_03651	0.69	+1.7
3,810,786	+		CCNA_03651	0.69	+0.1
3,810,789	-		CCNA_03651	0.69	+2.7
3,810,817	+		CCNA_03651	0.70	+3.6
3,810,941	+		CCNA_03651	0.74	+1.9
3,810,953	+		CCNA_03651	0.74	+2.5
3,810,961	-		CCNA_03651	0.75	+4.1
3,811,001	+		CCNA_03651	0.76	+0.2
3,811,031	-		CCNA_03651	0.77	+3.7
3,811,043	+		CCNA_03651	0.77	+3.8
3,811,096	-		CCNA_03651	0.79	+2.7
3,811,114	-		CCNA_03651	0.80	+2.9
3,811,114	-		CCNA_03651	0.80	+0.1
3,811,131	+		CCNA_03651	0.80	+4.9
3,811,149	+		CCNA_03651	0.81	+4.9
3,811,149	+		CCNA_03651	0.81	+2.7
3,811,248	-		CCNA_03651	0.84	+2.5
3,811,375	-		CCNA_03651	0.88	+1.9
3,811,418	-		CCNA_03651	0.90	+2.2
3,811,458	+				+1.4
3,811,466	-				+0.5
3,811,484	+				+4.2
3,811,484	+				+0.9
3,811,503	+				+2.6
3,811,554	+				+2.7
3,811,562	-				+1.7
3,811,562	-				+0.2
3,811,604	+				+0.1
3,811,805	+				-1.6
3,811,849	-				+1.1
3,811,850	+				-0.0
3,811,850	-				-0.4
3,811,854	-				-1.5
3,811,866	-				+2.4
3,811,884	-				+4.3
3,811,899	-				+4.7
3,811,923	+				+5.4
3,812,102	-				-0.2
3,812,132	+				+2.3
3,812,142	+				+1.8
3,812,166	-				+0.5
3,812,197	-				+4.3
3,812,375	-		CCNA_03652	0.15	-0.0
3,812,456	+		CCNA_03652	0.18	+2.6
3,812,456	+		CCNA_03652	0.18	+0.9
3,812,457	-		CCNA_03652	0.18	+3.3
3,812,461	+		CCNA_03652	0.18	+0.5
3,812,464	-		CCNA_03652	0.18	+3.5
3,812,524	-		CCNA_03652	0.19	+5.5
3,812,544	-				+1.7
3,812,567	+		CCNA_03652	0.21	+1.7
3,812,567	+		CCNA_03652	0.21	+2.4
3,812,681	+		CCNA_03652	0.24	-0.0
3,812,687	+		CCNA_03652	0.24	+1.3