Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03104

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
3,253,579	+		CCNA_03102	0.82	-0.7
3,253,609	-		CCNA_03102	0.84	-1.5
3,253,664	+		CCNA_03102	0.87	+2.7
3,253,735	+				-0.2
3,253,736	+				-0.1
3,253,742	+				-0.4
3,253,744	-				-1.0
3,253,775	+				+0.7
3,253,800	-				-0.1
3,253,829	+				-0.4
3,253,831	-				-0.7
3,253,851	+				+1.5
3,253,854	-				+3.2
3,253,885	-				-1.8
3,253,896	+				-1.0
3,253,897	+				-3.1
3,253,897	+				-1.0
3,253,904	-				-0.3
3,253,907	+				-1.1
3,253,910	-				-0.3
3,253,914	+				-2.2
3,253,915	-				-1.3
3,253,956	-				+0.8
3,253,958	+				-1.1
3,253,967	-				-1.1
3,253,979	-				-1.0
3,254,039	+		CCNA_03103	0.18	-1.2
3,254,047	-		CCNA_03103	0.20	-1.0
3,254,059	+		CCNA_03103	0.22	-0.9
3,254,062	-		CCNA_03103	0.22	+1.7
3,254,062	-		CCNA_03103	0.22	-1.1
3,254,087	+		CCNA_03103	0.26	+1.2
3,254,122	+		CCNA_03103	0.32	-0.6
3,254,122	+		CCNA_03103	0.32	-1.0
3,254,170	+		CCNA_03103	0.40	-2.7
3,254,263	+		CCNA_03103	0.56	+0.1
3,254,271	-		CCNA_03103	0.57	+0.1
3,254,278	-		CCNA_03103	0.58	+0.4
3,254,278	-		CCNA_03103	0.58	+0.9
3,254,314	+		CCNA_03103	0.64	+1.3
3,254,333	+		CCNA_03103	0.67	+0.2
3,254,359	+		CCNA_03103	0.71	-0.2
3,254,367	+		CCNA_03103	0.73	-1.3
3,254,372	+		CCNA_03103	0.74	+1.2
3,254,391	+		CCNA_03103	0.77	-2.0
3,254,407	-		CCNA_03103	0.79	-0.9
3,254,450	+		CCNA_03103	0.87	-1.9
3,254,457	-		CCNA_03103	0.88	+1.5
3,254,489	+				+1.0
3,254,513	+				+0.6
3,254,520	-				-1.1
3,254,524	+				+2.1
3,254,524	+				+0.2
3,254,524	+				-0.5
3,254,524	+				-3.2
3,254,524	+				-0.5
3,254,524	+				-1.2
3,254,532	-				-0.1
3,254,532	-				+0.5
3,254,532	-				-0.1
3,254,532	-				-0.6
3,254,532	-				-1.1
3,254,532	-				+1.5
3,254,534	-				-0.4
3,254,542	+				+2.6
3,254,542	+				-0.6
3,254,542	+				+0.6
3,254,542	+				-1.9
3,254,603	-				-0.8
3,254,608	-				-0.6
3,254,636	+				-0.6
3,254,639	-				-1.9
3,254,641	+				-0.3
3,254,688	-		CCNA_03104	0.13	-0.7
3,254,770	+		CCNA_03104	0.21	-2.4
3,254,778	-		CCNA_03104	0.21	-0.4
3,254,778	-		CCNA_03104	0.21	-0.1
3,254,916	+		CCNA_03104	0.34	-1.5
3,254,927	+		CCNA_03104	0.35	-1.2
3,254,935	-		CCNA_03104	0.35	-0.5
3,255,053	+		CCNA_03104	0.46	-0.8
3,255,053	-		CCNA_03104	0.46	-0.9
3,255,058	+		CCNA_03104	0.47	-0.9
3,255,098	-		CCNA_03104	0.50	-1.0
3,255,103	+		CCNA_03104	0.51	-0.4
3,255,135	+		CCNA_03104	0.53	-1.3
3,255,167	+		CCNA_03104	0.56	-1.0
3,255,167	+		CCNA_03104	0.56	-2.5
3,255,167	+		CCNA_03104	0.56	-2.2
3,255,167	+		CCNA_03104	0.56	-1.3
3,255,196	-		CCNA_03104	0.59	-0.2
3,255,282	-		CCNA_03104	0.67	-0.4
3,255,357	+		CCNA_03104	0.73	-1.3
3,255,359	-		CCNA_03104	0.74	+0.7
3,255,368	+		CCNA_03104	0.74	-2.4
3,255,368	+		CCNA_03104	0.74	-1.5
3,255,411	+		CCNA_03104	0.78	-1.2
3,255,413	-		CCNA_03104	0.78	-2.7
3,255,437	+		CCNA_03104	0.81	-2.3
3,255,534	-		CCNA_03104	0.89	-0.0
3,255,534	-		CCNA_03104	0.89	+1.0
3,255,622	-				-0.2
3,255,647	+				+1.3
3,255,655	-				+0.0
3,255,655	-				+0.0
3,255,704	+				-1.0
3,255,744	-				-0.6
3,255,759	+				+0.5
3,255,772	-				+0.8
3,255,789	+				-1.8
3,255,789	-				+1.1
3,255,812	+				-1.2
3,255,820	-				-0.0
3,255,862	-				-3.7
3,255,862	-				-1.2
3,255,888	-				-1.0
3,255,900	-		CCNA_03105	0.11	-0.7
3,255,936	-		CCNA_03105	0.17	-2.1
3,255,936	-		CCNA_03105	0.17	+0.6
3,256,051	+		CCNA_03105	0.34	+0.4
3,256,059	-		CCNA_03105	0.35	-0.7
3,256,091	-		CCNA_03105	0.40	-0.1
3,256,195	+		CCNA_03105	0.56	-1.0
3,256,197	+		CCNA_03105	0.57	+0.4
3,256,207	+		CCNA_03105	0.58	-2.0
3,256,212	+		CCNA_03105	0.59	+0.6
3,256,215	-		CCNA_03105	0.59	-1.8
3,256,220	-		CCNA_03105	0.60	+2.5
3,256,220	-		CCNA_03105	0.60	-0.6
3,256,220	-		CCNA_03105	0.60	-1.6
3,256,220	-		CCNA_03105	0.60	-0.4
3,256,282	+		CCNA_03105	0.70	-1.0
3,256,290	-		CCNA_03105	0.71	-2.6
3,256,338	-		CCNA_03105	0.78	-3.3
3,256,364	+		CCNA_03105	0.82	-0.8
3,256,383	+		CCNA_03105	0.85	-2.5
3,256,416	-				-0.5
3,256,418	+				+0.7
3,256,418	+				-0.3
3,256,482	+				-0.8
3,256,487	+				-3.2
3,256,487	+				-2.3
3,256,487	+				-0.3
3,256,495	-				-1.9
3,256,514	+				-0.6
3,256,596	+		CCNA_03106	0.22	-1.7
3,256,596	+		CCNA_03106	0.22	-1.5
3,256,604	-		CCNA_03106	0.25	-1.1
3,256,604	-		CCNA_03106	0.25	+0.5
3,256,604	-		CCNA_03106	0.25	+0.0
3,256,615	-		CCNA_03106	0.29	-1.9