Experiment: PYE with Phosphomycin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02634 and CCNA_02635 overlap by 1 nucleotides CCNA_02635 and CCNA_02636 are separated by 91 nucleotides CCNA_02636 and CCNA_02637 are separated by 101 nucleotides
CCNA_02634: CCNA_02634 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase, at 2,785,244 to 2,786,329
_02634
CCNA_02635: CCNA_02635 - cell division protein FtsW, at 2,786,329 to 2,787,501
_02635
CCNA_02636: CCNA_02636 - hypothetical protein, at 2,787,593 to 2,787,991
_02636
CCNA_02637: CCNA_02637 - PAS-family sensor histidine kinase, at 2,788,093 to 2,789,109
_02637
Position (kb)
2786
2787
2788 Strain fitness (log2 ratio)
-1
0
1
2 at 2787.546 kb on + strand at 2787.547 kb on + strand at 2787.547 kb on + strand at 2787.555 kb on - strand at 2787.555 kb on - strand at 2787.555 kb on - strand at 2787.580 kb on + strand at 2787.595 kb on + strand at 2787.598 kb on - strand at 2787.627 kb on + strand at 2787.627 kb on - strand at 2787.644 kb on - strand, within CCNA_02636 at 2787.646 kb on + strand, within CCNA_02636 at 2787.646 kb on + strand, within CCNA_02636 at 2787.654 kb on - strand, within CCNA_02636 at 2787.654 kb on - strand, within CCNA_02636 at 2787.654 kb on - strand, within CCNA_02636 at 2787.654 kb on - strand, within CCNA_02636 at 2787.659 kb on + strand, within CCNA_02636 at 2787.659 kb on + strand, within CCNA_02636 at 2787.666 kb on + strand, within CCNA_02636 at 2787.671 kb on + strand, within CCNA_02636 at 2787.671 kb on + strand, within CCNA_02636 at 2787.731 kb on - strand, within CCNA_02636 at 2787.749 kb on + strand, within CCNA_02636 at 2787.749 kb on + strand, within CCNA_02636 at 2787.763 kb on + strand, within CCNA_02636 at 2787.780 kb on + strand, within CCNA_02636 at 2787.810 kb on - strand, within CCNA_02636 at 2787.833 kb on - strand, within CCNA_02636 at 2787.856 kb on + strand, within CCNA_02636 at 2787.874 kb on + strand, within CCNA_02636 at 2787.888 kb on + strand, within CCNA_02636 at 2787.908 kb on + strand, within CCNA_02636 at 2787.908 kb on + strand, within CCNA_02636 at 2787.908 kb on + strand, within CCNA_02636 at 2787.908 kb on + strand, within CCNA_02636 at 2787.908 kb on + strand, within CCNA_02636 at 2787.908 kb on + strand, within CCNA_02636 at 2787.916 kb on - strand, within CCNA_02636 at 2787.933 kb on - strand, within CCNA_02636 at 2787.961 kb on + strand at 2788.035 kb on - strand at 2788.085 kb on + strand at 2788.092 kb on - strand at 2788.120 kb on + strand at 2788.128 kb on - strand at 2788.128 kb on - strand at 2788.128 kb on - strand at 2788.138 kb on - strand at 2788.139 kb on - strand at 2788.145 kb on + strand at 2788.165 kb on + strand at 2788.173 kb on - strand at 2788.183 kb on - strand at 2788.198 kb on - strand, within CCNA_02637 at 2788.224 kb on + strand, within CCNA_02637 at 2788.224 kb on + strand, within CCNA_02637 at 2788.250 kb on + strand, within CCNA_02637 at 2788.275 kb on + strand, within CCNA_02637 at 2788.275 kb on + strand, within CCNA_02637 at 2788.275 kb on + strand, within CCNA_02637 at 2788.304 kb on + strand, within CCNA_02637 at 2788.319 kb on + strand, within CCNA_02637 at 2788.395 kb on - strand, within CCNA_02637 at 2788.409 kb on + strand, within CCNA_02637 at 2788.414 kb on - strand, within CCNA_02637
Per-strain Table
Position Strand Gene LocusTag Fraction PYE with Phosphomycin 0.005 mg/ml remove 2,787,546 + -0.6 2,787,547 + -0.3 2,787,547 + +0.4 2,787,555 - +0.6 2,787,555 - -0.0 2,787,555 - -0.2 2,787,580 + -0.2 2,787,595 + -0.0 2,787,598 - +0.1 2,787,627 + +2.5 2,787,627 - -0.8 2,787,644 - CCNA_02636 0.13 -1.4 2,787,646 + CCNA_02636 0.13 -0.4 2,787,646 + CCNA_02636 0.13 +2.7 2,787,654 - CCNA_02636 0.15 -1.0 2,787,654 - CCNA_02636 0.15 +2.5 2,787,654 - CCNA_02636 0.15 -1.5 2,787,654 - CCNA_02636 0.15 -0.9 2,787,659 + CCNA_02636 0.17 +0.0 2,787,659 + CCNA_02636 0.17 -0.4 2,787,666 + CCNA_02636 0.18 +0.6 2,787,671 + CCNA_02636 0.20 -0.3 2,787,671 + CCNA_02636 0.20 -0.4 2,787,731 - CCNA_02636 0.35 -1.6 2,787,749 + CCNA_02636 0.39 -0.9 2,787,749 + CCNA_02636 0.39 +1.2 2,787,763 + CCNA_02636 0.43 +0.1 2,787,780 + CCNA_02636 0.47 -1.2 2,787,810 - CCNA_02636 0.54 -0.3 2,787,833 - CCNA_02636 0.60 +0.6 2,787,856 + CCNA_02636 0.66 -1.5 2,787,874 + CCNA_02636 0.70 +0.6 2,787,888 + CCNA_02636 0.74 +1.3 2,787,908 + CCNA_02636 0.79 +0.4 2,787,908 + CCNA_02636 0.79 -0.7 2,787,908 + CCNA_02636 0.79 -1.5 2,787,908 + CCNA_02636 0.79 +1.6 2,787,908 + CCNA_02636 0.79 +0.1 2,787,908 + CCNA_02636 0.79 -0.0 2,787,916 - CCNA_02636 0.81 -0.5 2,787,933 - CCNA_02636 0.85 -0.0 2,787,961 + -0.5 2,788,035 - -0.6 2,788,085 + -1.2 2,788,092 - -0.8 2,788,120 + -1.5 2,788,128 - -0.5 2,788,128 - -1.5 2,788,128 - +0.4 2,788,138 - -0.3 2,788,139 - -0.3 2,788,145 + -1.4 2,788,165 + +2.1 2,788,173 - +0.5 2,788,183 - -0.7 2,788,198 - CCNA_02637 0.10 +0.6 2,788,224 + CCNA_02637 0.13 +0.8 2,788,224 + CCNA_02637 0.13 -0.9 2,788,250 + CCNA_02637 0.15 -0.6 2,788,275 + CCNA_02637 0.18 +1.7 2,788,275 + CCNA_02637 0.18 -0.0 2,788,275 + CCNA_02637 0.18 +0.9 2,788,304 + CCNA_02637 0.21 -0.1 2,788,319 + CCNA_02637 0.22 -0.7 2,788,395 - CCNA_02637 0.30 -1.1 2,788,409 + CCNA_02637 0.31 -0.6 2,788,414 - CCNA_02637 0.32 -0.2
Or see this region's nucleotide sequence