Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02054

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
2,202,555	-				-0.1
2,202,564	-				-0.5
2,202,572	+				+1.8
2,202,629	+				-0.0
2,202,641	+				+1.0
2,202,642	+				+1.9
2,202,693	+				-0.5
2,202,733	-				-1.6
2,202,758	-				+0.5
2,202,832	+				-0.4
2,202,840	-				-1.4
2,202,840	-				+1.5
2,202,881	-		CCNA_02053	0.22	-2.7
2,202,883	+		CCNA_02053	0.23	+1.2
2,202,883	+		CCNA_02053	0.23	+3.4
2,202,883	+		CCNA_02053	0.23	+0.8
2,202,883	+		CCNA_02053	0.23	-0.8
2,202,883	+		CCNA_02053	0.23	+1.4
2,202,883	+		CCNA_02053	0.23	-0.2
2,202,883	+		CCNA_02053	0.23	-0.8
2,202,954	-		CCNA_02053	0.45	-0.5
2,203,119	+				+1.0
2,203,189	+				-1.3
2,203,226	-				+0.1
2,203,228	+				+0.1
2,203,236	-				+0.0
2,203,351	+				-0.5
2,203,357	-				+0.1
2,203,359	-				-0.7
2,203,378	+				+0.8
2,203,386	-				+0.6
2,203,390	+				-0.5
2,203,439	-				-2.3
2,203,570	-		CCNA_02054	0.11	+0.8
2,203,679	-		CCNA_02054	0.18	-1.7
2,203,679	-		CCNA_02054	0.18	-1.7
2,203,684	-		CCNA_02054	0.19	-3.0
2,203,706	+		CCNA_02054	0.20	+0.3
2,203,711	+		CCNA_02054	0.20	-1.3
2,203,711	+		CCNA_02054	0.20	-0.1
2,203,732	-		CCNA_02054	0.22	-1.8
2,203,778	+		CCNA_02054	0.25	-0.4
2,203,808	-		CCNA_02054	0.27	-2.2
2,203,808	-		CCNA_02054	0.27	-1.9
2,203,852	-		CCNA_02054	0.29	-2.8
2,203,887	+		CCNA_02054	0.32	+0.7
2,203,887	+		CCNA_02054	0.32	-1.6
2,203,904	-		CCNA_02054	0.33	-1.6
2,203,951	-		CCNA_02054	0.36	-2.2
2,204,075	-		CCNA_02054	0.44	-1.9
2,204,075	-		CCNA_02054	0.44	-1.7
2,204,088	+		CCNA_02054	0.45	-1.1
2,204,109	+		CCNA_02054	0.46	+0.2
2,204,109	+		CCNA_02054	0.46	+1.7
2,204,113	+		CCNA_02054	0.47	-0.6
2,204,113	+		CCNA_02054	0.47	+0.8
2,204,117	-		CCNA_02054	0.47	-2.7
2,204,121	-		CCNA_02054	0.47	-1.3
2,204,121	-		CCNA_02054	0.47	-1.4
2,204,129	+		CCNA_02054	0.48	-0.8
2,204,189	+		CCNA_02054	0.51	-3.6
2,204,262	-		CCNA_02054	0.56	-0.9
2,204,305	-		CCNA_02054	0.59	+2.8
2,204,363	+		CCNA_02054	0.63	+0.2
2,204,363	+		CCNA_02054	0.63	-1.1
2,204,363	+		CCNA_02054	0.63	-3.2
2,204,371	-		CCNA_02054	0.63	-1.2
2,204,399	+		CCNA_02054	0.65	-1.5
2,204,483	-		CCNA_02054	0.71	-1.3
2,204,495	+		CCNA_02054	0.71	-2.0
2,204,527	-		CCNA_02054	0.74	-3.3
2,204,602	+		CCNA_02054	0.78	-2.3
2,204,602	-		CCNA_02054	0.78	-2.6
2,204,625	-		CCNA_02054	0.80	-1.8
2,204,729	+		CCNA_02054	0.87	-1.7
2,204,754	+		CCNA_02054	0.88	+0.2
2,204,754	+		CCNA_02054	0.88	-0.2
2,204,785	+				+0.3
2,204,793	-				-1.4
2,204,793	-				-2.4
2,204,841	+				-0.8
2,204,877	+				-0.5
2,204,877	+				-1.4
2,204,883	+				-1.7
2,204,891	-				-2.2
2,204,891	-				-1.6
2,204,891	-				-0.5
2,204,904	-				-3.0
2,204,906	+				-0.5
2,204,942	+				-0.2
2,204,942	+				-0.6
2,204,944	+				-1.5
2,204,952	-				-2.0
2,204,999	-				+0.9
2,205,033	+				-1.5
2,205,084	+				+0.2
2,205,087	-				-0.5
2,205,125	+		CCNA_02055	0.20	+0.8
2,205,163	+		CCNA_02055	0.31	-0.0
2,205,191	-		CCNA_02055	0.40	+1.7
2,205,193	+		CCNA_02055	0.41	-0.3
2,205,201	-		CCNA_02055	0.43	-0.8
2,205,203	-		CCNA_02055	0.44	+1.0
2,205,203	-		CCNA_02055	0.44	-1.8
2,205,203	-		CCNA_02055	0.44	+1.2
2,205,203	-		CCNA_02055	0.44	-0.6
2,205,229	+		CCNA_02055	0.52	+0.5
2,205,237	-		CCNA_02055	0.54	-0.0
2,205,259	-		CCNA_02055	0.61	+0.4
2,205,291	+		CCNA_02055	0.71	+0.2
2,205,306	-		CCNA_02055	0.75	-0.7
2,205,306	-		CCNA_02055	0.75	+1.1
2,205,310	-		CCNA_02055	0.76	-0.5
2,205,312	+		CCNA_02055	0.77	-0.8
2,205,316	-		CCNA_02055	0.78	+1.9
2,205,371	-				-0.7
2,205,371	-				+1.6
2,205,381	+				+0.4