Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01555

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
1,669,653	-		CCNA_01554	0.39	+1.6
1,669,654	+		CCNA_01554	0.39	+0.7
1,669,662	-		CCNA_01554	0.39	+0.1
1,669,669	+		CCNA_01554	0.40	-0.7
1,669,687	+		CCNA_01554	0.41	+0.7
1,669,695	-		CCNA_01554	0.42	-0.3
1,669,697	+		CCNA_01554	0.42	-0.7
1,669,705	-		CCNA_01554	0.42	+1.0
1,669,743	-		CCNA_01554	0.45	-0.4
1,669,745	+		CCNA_01554	0.45	+0.3
1,669,752	+		CCNA_01554	0.46	-1.6
1,669,767	+		CCNA_01554	0.47	+2.8
1,669,785	-		CCNA_01554	0.48	+0.4
1,669,786	-		CCNA_01554	0.48	-1.4
1,669,792	+		CCNA_01554	0.48	+0.7
1,669,828	-		CCNA_01554	0.51	-0.5
1,670,015	+		CCNA_01554	0.64	-0.8
1,670,016	+		CCNA_01554	0.64	-0.7
1,670,024	-		CCNA_01554	0.64	-0.1
1,670,065	+		CCNA_01554	0.67	+1.1
1,670,076	+		CCNA_01554	0.68	+0.6
1,670,076	+		CCNA_01554	0.68	-1.8
1,670,126	-		CCNA_01554	0.71	-1.0
1,670,137	+		CCNA_01554	0.72	+0.7
1,670,145	-		CCNA_01554	0.73	-0.2
1,670,145	-		CCNA_01554	0.73	-0.4
1,670,145	-		CCNA_01554	0.73	-1.5
1,670,146	-		CCNA_01554	0.73	-0.7
1,670,151	-		CCNA_01554	0.73	-1.3
1,670,151	-		CCNA_01554	0.73	-0.2
1,670,290	+		CCNA_01554	0.83	+1.0
1,670,298	-		CCNA_01554	0.83	-2.1
1,670,338	-		CCNA_01554	0.86	+0.0
1,670,381	+		CCNA_01554	0.89	-1.3
1,670,404	+				-1.0
1,670,509	+				+1.5
1,670,509	+				-1.5
1,670,517	-				-1.1
1,670,517	-				-1.1
1,670,517	-				+0.8
1,670,547	+				+0.4
1,670,569	+				+1.7
1,670,726	-				-0.7
1,670,764	+				+0.6
1,670,764	+				+0.2
1,670,764	-				+0.2
1,670,772	-				+0.6
1,670,826	-		CCNA_01555	0.13	-0.5
1,670,851	+		CCNA_01555	0.15	-2.0
1,670,859	-		CCNA_01555	0.15	-0.1
1,670,859	-		CCNA_01555	0.15	+0.0
1,670,876	-		CCNA_01555	0.17	-1.5
1,670,915	+		CCNA_01555	0.19	+1.6
1,670,932	+				+2.2
1,670,953	+		CCNA_01555	0.22	-0.7
1,670,953	+		CCNA_01555	0.22	-0.1
1,670,958	+		CCNA_01555	0.22	-0.3
1,670,960	-		CCNA_01555	0.22	+0.6
1,670,986	+		CCNA_01555	0.24	-0.3
1,671,019	+		CCNA_01555	0.26	-1.4
1,671,027	-		CCNA_01555	0.27	+1.2
1,671,053	+		CCNA_01555	0.28	-2.0
1,671,055	+		CCNA_01555	0.28	-0.1
1,671,064	-		CCNA_01555	0.29	+1.0
1,671,231	+		CCNA_01555	0.40	+0.6
1,671,242	+		CCNA_01555	0.41	-1.0
1,671,332	+		CCNA_01555	0.47	+0.2
1,671,333	-		CCNA_01555	0.47	-0.6
1,671,357	-		CCNA_01555	0.48	+0.3
1,671,365	+		CCNA_01555	0.49	+1.9
1,671,367	-		CCNA_01555	0.49	+0.3
1,671,367	-		CCNA_01555	0.49	+0.9
1,671,414	-		CCNA_01555	0.52	-0.6
1,671,444	-		CCNA_01555	0.54	-0.5
1,671,453	+				+3.5
1,671,460	-		CCNA_01555	0.55	+0.3
1,671,461	-		CCNA_01555	0.55	-0.2
1,671,470	-		CCNA_01555	0.56	+3.2
1,671,485	+		CCNA_01555	0.57	-0.3
1,671,493	-		CCNA_01555	0.57	-1.1
1,671,493	-		CCNA_01555	0.57	+0.5
1,671,493	-		CCNA_01555	0.57	+0.2
1,671,520	+		CCNA_01555	0.59	-1.3
1,671,527	+		CCNA_01555	0.60	-0.8
1,671,528	-		CCNA_01555	0.60	-1.5
1,671,542	+		CCNA_01555	0.61	-0.7
1,671,592	+		CCNA_01555	0.64	+0.6
1,671,610	-		CCNA_01555	0.65	+0.7
1,671,634	-		CCNA_01555	0.67	-0.1
1,671,667	+		CCNA_01555	0.69	-1.4
1,671,731	+		CCNA_01555	0.73	-1.2
1,671,750	+		CCNA_01555	0.74	-1.0
1,671,778	+		CCNA_01555	0.76	+1.4
1,671,778	+		CCNA_01555	0.76	+0.9
1,671,779	+		CCNA_01555	0.76	-1.6
1,671,779	+		CCNA_01555	0.76	-1.1
1,671,787	-		CCNA_01555	0.77	-1.4
1,671,788	+		CCNA_01555	0.77	+0.4
1,671,788	-		CCNA_01555	0.77	+0.0
1,671,788	-		CCNA_01555	0.77	-0.8
1,671,851	+		CCNA_01555	0.81	+0.5
1,671,948	+		CCNA_01555	0.88	+1.2
1,671,979	+		CCNA_01555	0.90	-1.6
1,671,987	-				+0.7
1,672,051	-				-0.9
1,672,056	-				-0.8
1,672,116	-				-0.8
1,672,121	-				-1.4
1,672,153	+				-0.7
1,672,153	+				-0.3
1,672,254	+				-0.7
1,672,301	-				+0.1
1,672,323	-				-1.3
1,672,368	-				+1.6
1,672,623	+		CCNA_01556	0.31	+1.2
1,672,628	+		CCNA_01556	0.31	-0.2
1,672,821	+		CCNA_01556	0.49	-1.2
1,672,959	+		CCNA_01556	0.62	+0.2