Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01252

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
1,378,230	+		CCNA_01250	0.81	+1.8
1,378,230	+		CCNA_01250	0.81	+1.9
1,378,230	+		CCNA_01250	0.81	+4.1
1,378,230	+		CCNA_01250	0.81	+2.5
1,378,230	+		CCNA_01250	0.81	+3.8
1,378,267	+		CCNA_01250	0.85	+4.7
1,378,325	-				+2.0
1,378,334	+				+1.9
1,378,342	-				+1.2
1,378,370	-				+3.0
1,378,384	+				+3.9
1,378,463	+				+3.3
1,378,463	+				+3.8
1,378,541	+		CCNA_01251	0.16	+3.0
1,378,550	-		CCNA_01251	0.17	+4.0
1,378,550	-		CCNA_01251	0.17	+0.9
1,378,551	+		CCNA_01251	0.17	+3.9
1,378,555	-		CCNA_01251	0.18	+3.7
1,378,566	+		CCNA_01251	0.19	+2.6
1,378,616	+		CCNA_01251	0.26	+4.4
1,378,646	-		CCNA_01251	0.30	+4.8
1,378,666	-		CCNA_01251	0.33	+5.6
1,378,723	+		CCNA_01251	0.40	+3.3
1,378,756	-		CCNA_01251	0.44	+2.8
1,378,761	+		CCNA_01251	0.45	+3.0
1,378,812	+		CCNA_01251	0.52	+2.5
1,378,812	+		CCNA_01251	0.52	+6.4
1,378,812	+		CCNA_01251	0.52	+3.9
1,378,820	-		CCNA_01251	0.53	+0.2
1,378,838	+		CCNA_01251	0.55	+4.2
1,378,936	+		CCNA_01251	0.68	+3.0
1,378,957	-		CCNA_01251	0.71	+2.3
1,378,959	+		CCNA_01251	0.71	+2.9
1,378,967	-				+2.0
1,379,035	-		CCNA_01251	0.81	+1.7
1,379,038	+		CCNA_01251	0.82	+4.0
1,379,122	+				+3.1
1,379,159	-				+3.8
1,379,179	+				+1.2
1,379,212	-				+0.8
1,379,237	-				-1.1
1,379,244	+				-0.8
1,379,270	+				-3.6
1,379,296	+				+1.2
1,379,296	+				-0.7
1,379,303	+				+0.9
1,379,304	-				-0.7
1,379,304	-				-1.9
1,379,304	-				-2.3
1,379,316	-				-0.5
1,379,337	-				-1.3
1,379,370	+				+0.9
1,379,378	+				-0.8
1,379,407	-		CCNA_01252	0.11	-1.3
1,379,451	-		CCNA_01252	0.13	-1.1
1,379,504	+		CCNA_01252	0.15	-0.8
1,379,504	+		CCNA_01252	0.15	-2.0
1,379,508	-		CCNA_01252	0.16	-0.5
1,379,509	+		CCNA_01252	0.16	+2.0
1,379,573	+		CCNA_01252	0.19	+2.4
1,379,617	-		CCNA_01252	0.21	-2.3
1,379,627	+		CCNA_01252	0.21	-1.9
1,379,685	+		CCNA_01252	0.24	-2.7
1,379,693	-		CCNA_01252	0.24	-1.4
1,379,693	-		CCNA_01252	0.24	-0.1
1,379,738	+		CCNA_01252	0.27	-1.5
1,379,779	+		CCNA_01252	0.28	+0.7
1,379,806	-		CCNA_01252	0.30	-1.1
1,379,813	+		CCNA_01252	0.30	-0.4
1,379,823	-		CCNA_01252	0.31	-1.3
1,379,848	-		CCNA_01252	0.32	-0.3
1,379,852	+		CCNA_01252	0.32	+0.9
1,379,852	+		CCNA_01252	0.32	-1.6
1,379,857	+		CCNA_01252	0.32	+0.7
1,379,857	+		CCNA_01252	0.32	+0.0
1,379,857	+		CCNA_01252	0.32	-0.5
1,379,857	+		CCNA_01252	0.32	-0.2
1,379,857	+		CCNA_01252	0.32	-1.4
1,379,865	-		CCNA_01252	0.33	-0.9
1,379,865	-		CCNA_01252	0.33	-0.2
1,379,865	-		CCNA_01252	0.33	-0.9
1,379,870	-		CCNA_01252	0.33	-1.1
1,379,893	-		CCNA_01252	0.34	-1.0
1,379,893	-		CCNA_01252	0.34	-0.6
1,379,901	-		CCNA_01252	0.34	-1.0
1,379,911	+		CCNA_01252	0.35	-1.3
1,379,938	+		CCNA_01252	0.36	+1.0
1,379,938	+		CCNA_01252	0.36	-0.8
1,379,946	-		CCNA_01252	0.36	-1.9
1,379,946	-		CCNA_01252	0.36	-1.1
1,379,946	-		CCNA_01252	0.36	-1.0
1,379,948	+		CCNA_01252	0.37	-3.2
1,379,985	+		CCNA_01252	0.38	-1.4
1,380,006	-		CCNA_01252	0.39	-1.6
1,380,108	+		CCNA_01252	0.44	-0.0
1,380,116	-		CCNA_01252	0.45	-1.1
1,380,116	-		CCNA_01252	0.45	-1.0
1,380,116	-		CCNA_01252	0.45	-1.1
1,380,133	+				+3.0
1,380,141	-		CCNA_01252	0.46	-1.3
1,380,177	-		CCNA_01252	0.47	-0.9
1,380,228	+		CCNA_01252	0.50	-1.8
1,380,236	-		CCNA_01252	0.50	-1.2
1,380,247	+		CCNA_01252	0.51	+0.3
1,380,255	-		CCNA_01252	0.51	+1.9
1,380,271	-		CCNA_01252	0.52	-1.3
1,380,295	-		CCNA_01252	0.53	-1.7
1,380,333	+		CCNA_01252	0.55	-0.6
1,380,367	+		CCNA_01252	0.56	-0.9
1,380,375	-		CCNA_01252	0.57	-1.7
1,380,375	-		CCNA_01252	0.57	-0.7
1,380,378	+		CCNA_01252	0.57	-1.1
1,380,379	+		CCNA_01252	0.57	-1.8
1,380,428	+		CCNA_01252	0.59	-1.5
1,380,436	-		CCNA_01252	0.60	-2.6
1,380,438	+		CCNA_01252	0.60	+2.0
1,380,446	-		CCNA_01252	0.60	-0.3
1,380,458	+		CCNA_01252	0.61	-2.8
1,380,471	+		CCNA_01252	0.61	+1.2
1,380,487	+		CCNA_01252	0.62	-1.0
1,380,492	+		CCNA_01252	0.62	-0.5
1,380,500	-		CCNA_01252	0.63	-1.0
1,380,512	+		CCNA_01252	0.63	-0.8
1,380,586	+		CCNA_01252	0.67	+0.1
1,380,586	+		CCNA_01252	0.67	+1.4
1,380,594	-		CCNA_01252	0.67	-1.3
1,380,605	-		CCNA_01252	0.68	-1.1
1,380,627	+		CCNA_01252	0.69	+0.7
1,380,630	-		CCNA_01252	0.69	-2.0
1,380,715	+		CCNA_01252	0.73	-2.6
1,380,723	+		CCNA_01252	0.73	-1.7
1,380,729	-		CCNA_01252	0.74	-2.7
1,380,766	-		CCNA_01252	0.75	-1.0
1,380,766	-		CCNA_01252	0.75	-1.1
1,380,782	-		CCNA_01252	0.76	-0.9
1,380,796	+		CCNA_01252	0.77	+1.7
1,380,796	+		CCNA_01252	0.77	+0.5
1,380,801	+		CCNA_01252	0.77	-1.0
1,380,801	+		CCNA_01252	0.77	-2.9
1,380,801	+		CCNA_01252	0.77	-1.4
1,380,801	+		CCNA_01252	0.77	-0.1
1,380,804	-		CCNA_01252	0.77	-1.3
1,380,804	-		CCNA_01252	0.77	+1.7
1,380,809	-		CCNA_01252	0.78	-1.3
1,380,809	-		CCNA_01252	0.78	-0.1
1,380,809	-		CCNA_01252	0.78	-0.6
1,380,809	-		CCNA_01252	0.78	-0.7
1,380,809	-		CCNA_01252	0.78	+0.9
1,380,809	-		CCNA_01252	0.78	-0.7
1,380,814	-		CCNA_01252	0.78	-1.6
1,380,841	-		CCNA_01252	0.79	-0.4
1,380,866	-		CCNA_01252	0.80	-0.6
1,380,868	+		CCNA_01252	0.80	-1.5
1,380,868	+		CCNA_01252	0.80	+0.1
1,380,868	+		CCNA_01252	0.80	-1.1
1,380,868	+		CCNA_01252	0.80	-1.8
1,380,876	-		CCNA_01252	0.81	-0.8
1,380,876	-		CCNA_01252	0.81	-1.0
1,380,893	-		CCNA_01252	0.82	-0.2
1,380,993	-		CCNA_01252	0.86	-2.1
1,381,034	+		CCNA_01252	0.88	-2.7
1,381,034	+		CCNA_01252	0.88	-0.8
1,381,038	-		CCNA_01252	0.88	+0.7
1,381,042	-		CCNA_01252	0.89	-0.7
1,381,042	-		CCNA_01252	0.89	-1.7
1,381,044	+		CCNA_01252	0.89	-1.8
1,381,044	+		CCNA_01252	0.89	-1.1
1,381,044	+		CCNA_01252	0.89	+0.1
1,381,044	+		CCNA_01252	0.89	-1.6
1,381,044	+		CCNA_01252	0.89	-0.4
1,381,044	+		CCNA_01252	0.89	-0.6
1,381,044	+		CCNA_01252	0.89	-1.0
1,381,052	-		CCNA_01252	0.89	-0.4
1,381,052	-		CCNA_01252	0.89	-0.1
1,381,052	-		CCNA_01252	0.89	-0.9
1,381,052	-		CCNA_01252	0.89	-0.3
1,381,052	-		CCNA_01252	0.89	+0.3
1,381,095	-				-0.9
1,381,099	+				-0.6
1,381,107	-				-0.6
1,381,107	-				-1.4
1,381,107	-				-0.4
1,381,120	+				-1.9
1,381,133	+				-1.6
1,381,155	-				-1.9
1,381,159	-				+0.8
1,381,164	-				-0.5
1,381,184	-				-2.5
1,381,188	+				+0.6
1,381,189	+				-0.1
1,381,189	-				-1.8
1,381,189	-				+0.3
1,381,189	-				-1.0
1,381,197	-				-0.1
1,381,216	-				-0.6
1,381,245	-				-0.8
1,381,273	-				-1.4
1,381,289	+				+0.7
1,381,291	+				-1.4
1,381,297	-				-0.9
1,381,297	-				-0.7
1,381,326	+				-1.3
1,381,394	-				+1.4
1,381,395	+				-1.3
1,381,402	-				-0.3
1,381,421	+				-0.2
1,381,421	+				+1.4
1,381,421	+				-1.7
1,381,421	+				+1.4
1,381,421	+				-1.4
1,381,429	-				-0.6
1,381,429	-				+0.2
1,381,429	-				+0.2
1,381,429	-				-0.6
1,381,429	-				+0.9
1,381,429	-				+0.6
1,381,465	+				+2.8
1,381,500	+				+0.9
1,381,548	+				-1.6