Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01023

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
1,108,931	+		CCNA_01022	0.37	-0.1
1,108,932	+		CCNA_01022	0.37	-2.1
1,108,939	-		CCNA_01022	0.37	+0.9
1,108,948	+		CCNA_01022	0.38	-0.0
1,108,956	-		CCNA_01022	0.38	-1.4
1,108,975	-		CCNA_01022	0.40	-0.3
1,109,000	-		CCNA_01022	0.41	-0.3
1,109,018	+		CCNA_01022	0.43	+0.4
1,109,058	-		CCNA_01022	0.45	-0.1
1,109,100	+		CCNA_01022	0.48	-0.8
1,109,100	+		CCNA_01022	0.48	+0.6
1,109,100	+		CCNA_01022	0.48	-0.3
1,109,100	+		CCNA_01022	0.48	+0.0
1,109,100	+		CCNA_01022	0.48	+0.3
1,109,108	-		CCNA_01022	0.48	+1.1
1,109,108	-		CCNA_01022	0.48	-1.7
1,109,108	-		CCNA_01022	0.48	+0.2
1,109,108	-		CCNA_01022	0.48	-0.9
1,109,108	-		CCNA_01022	0.48	-1.4
1,109,108	-		CCNA_01022	0.48	-0.7
1,109,108	-		CCNA_01022	0.48	+1.3
1,109,117	+		CCNA_01022	0.49	+0.6
1,109,117	+		CCNA_01022	0.49	-0.2
1,109,122	+		CCNA_01022	0.49	-1.7
1,109,130	-		CCNA_01022	0.50	-0.3
1,109,144	+		CCNA_01022	0.51	+0.3
1,109,147	-		CCNA_01022	0.51	-0.1
1,109,147	-		CCNA_01022	0.51	-0.8
1,109,152	-		CCNA_01022	0.51	-0.4
1,109,161	-		CCNA_01022	0.52	-1.8
1,109,166	-		CCNA_01022	0.52	-0.1
1,109,199	+		CCNA_01022	0.54	+0.9
1,109,211	+		CCNA_01022	0.55	+0.9
1,109,221	-		CCNA_01022	0.56	+0.5
1,109,221	-		CCNA_01022	0.56	-1.7
1,109,282	+		CCNA_01022	0.60	-0.9
1,109,302	+		CCNA_01022	0.61	-0.3
1,109,302	+		CCNA_01022	0.61	-0.3
1,109,302	+		CCNA_01022	0.61	+0.5
1,109,305	-		CCNA_01022	0.61	-1.7
1,109,337	+		CCNA_01022	0.63	-1.5
1,109,345	-		CCNA_01022	0.64	-0.5
1,109,345	-				+0.9
1,109,397	-		CCNA_01022	0.67	-1.2
1,109,436	+		CCNA_01022	0.70	-0.9
1,109,436	+		CCNA_01022	0.70	-1.8
1,109,436	+		CCNA_01022	0.70	+1.0
1,109,444	-		CCNA_01022	0.70	+0.5
1,109,544	+		CCNA_01022	0.77	+1.1
1,109,593	+		CCNA_01022	0.80	-1.0
1,109,594	+		CCNA_01022	0.80	+0.2
1,109,609	+		CCNA_01022	0.81	-0.1
1,109,619	+		CCNA_01022	0.82	-1.7
1,109,627	-		CCNA_01022	0.82	+0.5
1,109,627	-		CCNA_01022	0.82	+2.9
1,109,627	-		CCNA_01022	0.82	-0.2
1,109,654	-		CCNA_01022	0.84	-0.1
1,109,682	-		CCNA_01022	0.86	-1.9
1,109,711	+		CCNA_01022	0.88	-1.4
1,109,719	-		CCNA_01022	0.88	-0.6
1,109,719	-		CCNA_01022	0.88	+1.6
1,109,767	-				-0.3
1,109,801	-				+0.6
1,109,801	-				-0.1
1,109,851	-				+0.9
1,109,853	+				+1.3
1,109,861	-				+2.3
1,109,893	+				+0.0
1,109,898	+				-1.4
1,109,898	+				-1.5
1,109,898	+				-0.8
1,109,906	-				-0.9
1,109,906	-				-0.2
1,109,906	-				+0.2
1,109,906	-				+0.0
1,109,906	-				-0.4
1,109,913	-				-0.5
1,109,922	+				+0.0
1,109,922	+				+1.5
1,109,922	+				-0.3
1,109,934	+				-1.0
1,110,030	+				-1.5
1,110,035	+				-1.0
1,110,035	+				-0.0
1,110,038	-				-1.9
1,110,059	+				+0.7
1,110,094	+		CCNA_01023	0.12	-1.3
1,110,094	-		CCNA_01023	0.12	+1.1
1,110,139	+		CCNA_01023	0.15	+0.5
1,110,139	+		CCNA_01023	0.15	-0.4
1,110,147	-		CCNA_01023	0.15	-0.1
1,110,149	+		CCNA_01023	0.16	+1.4
1,110,149	+		CCNA_01023	0.16	+0.7
1,110,149	+		CCNA_01023	0.16	-1.7
1,110,149	+		CCNA_01023	0.16	+2.3
1,110,157	-		CCNA_01023	0.16	-1.3
1,110,157	-		CCNA_01023	0.16	+0.3
1,110,157	-		CCNA_01023	0.16	+0.2
1,110,167	+		CCNA_01023	0.17	+0.6
1,110,191	-		CCNA_01023	0.18	-0.8
1,110,200	+		CCNA_01023	0.19	+0.1
1,110,208	-		CCNA_01023	0.19	+0.1
1,110,208	-		CCNA_01023	0.19	+0.1
1,110,244	-		CCNA_01023	0.22	-1.3
1,110,245	+		CCNA_01023	0.22	-0.9
1,110,245	+		CCNA_01023	0.22	-3.0
1,110,245	+		CCNA_01023	0.22	+1.1
1,110,281	-		CCNA_01023	0.24	-0.8
1,110,318	+		CCNA_01023	0.26	-0.1
1,110,318	+		CCNA_01023	0.26	-0.3
1,110,338	+		CCNA_01023	0.28	-0.2
1,110,359	-		CCNA_01023	0.29	+0.1
1,110,386	+		CCNA_01023	0.31	-1.4
1,110,407	+		CCNA_01023	0.32	+1.2
1,110,425	-		CCNA_01023	0.33	+1.5
1,110,432	+		CCNA_01023	0.34	+0.7
1,110,447	-		CCNA_01023	0.35	-0.3
1,110,552	+		CCNA_01023	0.42	-1.7
1,110,572	+		CCNA_01023	0.43	-1.0
1,110,598	+		CCNA_01023	0.44	+0.7
1,110,598	+		CCNA_01023	0.44	+0.3
1,110,598	+		CCNA_01023	0.44	-0.8
1,110,598	+		CCNA_01023	0.44	-1.2
1,110,598	+		CCNA_01023	0.44	-0.2
1,110,599	+		CCNA_01023	0.45	-0.6
1,110,605	-		CCNA_01023	0.45	-0.0
1,110,606	-		CCNA_01023	0.45	-0.7
1,110,606	-		CCNA_01023	0.45	+1.7
1,110,607	-		CCNA_01023	0.45	-1.0
1,110,631	-		CCNA_01023	0.47	-0.6
1,110,652	+		CCNA_01023	0.48	-1.0
1,110,671	-		CCNA_01023	0.49	-0.5
1,110,687	+		CCNA_01023	0.50	+1.6
1,110,687	+		CCNA_01023	0.50	+0.2
1,110,687	+		CCNA_01023	0.50	-0.4
1,110,687	+		CCNA_01023	0.50	-2.0
1,110,687	+		CCNA_01023	0.50	-0.9
1,110,687	+		CCNA_01023	0.50	-1.8
1,110,687	+		CCNA_01023	0.50	-1.2
1,110,687	+		CCNA_01023	0.50	+1.0
1,110,687	+		CCNA_01023	0.50	-0.4
1,110,687	+		CCNA_01023	0.50	+0.1
1,110,687	+		CCNA_01023	0.50	+0.2
1,110,687	+		CCNA_01023	0.50	+1.0
1,110,687	+		CCNA_01023	0.50	-0.5
1,110,687	+		CCNA_01023	0.50	-0.7
1,110,687	+		CCNA_01023	0.50	+0.3
1,110,689	+		CCNA_01023	0.50	+0.0
1,110,689	+		CCNA_01023	0.50	-0.6
1,110,695	-		CCNA_01023	0.51	-2.5
1,110,695	-		CCNA_01023	0.51	+0.9
1,110,695	-		CCNA_01023	0.51	-0.5
1,110,695	-		CCNA_01023	0.51	-0.6
1,110,695	-		CCNA_01023	0.51	+1.6
1,110,695	-		CCNA_01023	0.51	+0.5
1,110,695	-		CCNA_01023	0.51	-0.3
1,110,695	-		CCNA_01023	0.51	+0.0
1,110,695	-		CCNA_01023	0.51	+0.5
1,110,695	-		CCNA_01023	0.51	-2.5
1,110,695	-		CCNA_01023	0.51	-0.3
1,110,695	-		CCNA_01023	0.51	-0.3
1,110,695	-		CCNA_01023	0.51	+0.1
1,110,695	-		CCNA_01023	0.51	-0.3
1,110,695	-		CCNA_01023	0.51	-2.2
1,110,695	-		CCNA_01023	0.51	-1.4
1,110,695	-		CCNA_01023	0.51	-0.3
1,110,695	-		CCNA_01023	0.51	-0.3
1,110,697	-		CCNA_01023	0.51	-1.0
1,110,699	+		CCNA_01023	0.51	-0.7
1,110,706	+		CCNA_01023	0.51	+0.6
1,110,707	-		CCNA_01023	0.52	-0.5
1,110,707	-		CCNA_01023	0.52	-1.6
1,110,713	-		CCNA_01023	0.52	-0.7
1,110,731	-		CCNA_01023	0.53	-0.7
1,110,747	-		CCNA_01023	0.54	+0.4
1,110,774	-		CCNA_01023	0.56	-0.9
1,110,774	-		CCNA_01023	0.56	+0.3
1,110,781	-		CCNA_01023	0.56	-1.0
1,110,783	+		CCNA_01023	0.56	+1.3
1,110,807	-		CCNA_01023	0.58	-1.0
1,110,814	+		CCNA_01023	0.58	+0.1
1,110,916	-		CCNA_01023	0.65	-0.5
1,110,952	+		CCNA_01023	0.67	-0.9
1,110,953	+		CCNA_01023	0.67	-0.1
1,110,960	-		CCNA_01023	0.68	-0.3
1,111,100	-		CCNA_01023	0.77	+3.1
1,111,100	-		CCNA_01023	0.77	+0.5
1,111,100	-		CCNA_01023	0.77	+1.3
1,111,110	-		CCNA_01023	0.77	+0.1
1,111,120	-		CCNA_01023	0.78	-1.1
1,111,144	+		CCNA_01023	0.80	+0.6
1,111,152	-		CCNA_01023	0.80	+0.3
1,111,160	+		CCNA_01023	0.81	-0.5
1,111,168	-		CCNA_01023	0.81	+1.0
1,111,182	+		CCNA_01023	0.82	+0.6
1,111,182	+		CCNA_01023	0.82	-0.2
1,111,182	+		CCNA_01023	0.82	-1.0
1,111,185	-		CCNA_01023	0.82	+1.1
1,111,188	+		CCNA_01023	0.83	-0.8
1,111,188	+		CCNA_01023	0.83	+0.2
1,111,190	-		CCNA_01023	0.83	-0.3
1,111,190	-		CCNA_01023	0.83	+1.6
1,111,190	-		CCNA_01023	0.83	+0.1
1,111,196	-		CCNA_01023	0.83	+0.1
1,111,196	-		CCNA_01023	0.83	-0.7
1,111,197	-		CCNA_01023	0.83	-1.8
1,111,257	+		CCNA_01023	0.87	-0.7
1,111,259	+		CCNA_01023	0.87	-0.7
1,111,265	-		CCNA_01023	0.87	+0.5
1,111,265	-		CCNA_01023	0.87	+0.2
1,111,265	-		CCNA_01023	0.87	-0.1
1,111,265	-		CCNA_01023	0.87	+1.8
1,111,267	-		CCNA_01023	0.88	+0.2
1,111,299	-		CCNA_01023	0.90	-1.3
1,111,301	-		CCNA_01023	0.90	-0.8
1,111,301	-		CCNA_01023	0.90	-0.3
1,111,321	+				+1.0
1,111,328	+				-1.4
1,111,328	+				-0.5
1,111,328	+				-1.1
1,111,328	+				-3.3
1,111,335	-				+1.1
1,111,336	-				-0.8
1,111,336	-				-1.2
1,111,336	-				+1.1
1,111,336	-				+1.2
1,111,336	-				+0.8
1,111,336	-				-0.5
1,111,348	+				+0.1
1,111,370	-				+2.1
1,111,425	+				+1.9
1,111,440	+				+0.3
1,111,460	-				+0.4
1,111,474	+				-1.5
1,111,476	-				-0.2
1,111,504	-				+0.2
1,111,511	-				-1.1
1,111,529	+				-0.3
1,111,537	-				+0.7
1,111,537	-				+0.6
1,111,546	-				+0.5
1,111,579	+				-0.9
1,111,613	-				-1.1
1,111,613	-				-1.4
1,111,660	+				-1.7
1,111,660	+				-0.3
1,111,660	+				-1.4
1,111,660	+				-0.4
1,111,660	+				+1.0
1,111,660	+				+0.9
1,111,668	-		CCNA_01024	0.10	+0.0
1,111,668	-		CCNA_01024	0.10	-0.8
1,111,668	-		CCNA_01024	0.10	+1.2
1,111,668	-		CCNA_01024	0.10	+0.5
1,111,670	+		CCNA_01024	0.11	-0.8
1,111,712	+		CCNA_01024	0.19	-1.6
1,111,788	+		CCNA_01024	0.35	+0.2
1,111,791	-		CCNA_01024	0.35	+0.7
1,111,791	-		CCNA_01024	0.35	+2.9
1,111,791	-		CCNA_01024	0.35	-0.3
1,111,791	-		CCNA_01024	0.35	-0.5
1,111,837	+		CCNA_01024	0.44	-0.2
1,111,844	+		CCNA_01024	0.46	-0.5
1,111,845	-		CCNA_01024	0.46	-0.2
1,111,847	-		CCNA_01024	0.46	+0.3
1,111,849	+		CCNA_01024	0.47	-0.5
1,111,857	-		CCNA_01024	0.48	-1.1
1,111,857	-		CCNA_01024	0.48	-1.4
1,111,857	-		CCNA_01024	0.48	+1.1
1,111,876	-		CCNA_01024	0.52	+1.3
1,111,881	-		CCNA_01024	0.53	-0.2
1,111,881	-		CCNA_01024	0.53	-0.2
1,111,881	-		CCNA_01024	0.53	+0.8
1,111,881	-		CCNA_01024	0.53	+0.7
1,111,881	-		CCNA_01024	0.53	+0.7
1,111,881	-		CCNA_01024	0.53	+0.7
1,111,915	+		CCNA_01024	0.60	-1.9
1,111,916	+		CCNA_01024	0.60	+0.2
1,111,921	-		CCNA_01024	0.61	-0.3
1,111,923	-		CCNA_01024	0.62	+0.0
1,111,931	-		CCNA_01024	0.63	+0.3
1,111,963	+		CCNA_01024	0.70	+0.6
1,111,963	+		CCNA_01024	0.70	+1.3
1,111,971	-		CCNA_01024	0.72	+0.5
1,111,971	-		CCNA_01024	0.72	+0.9
1,111,971	-		CCNA_01024	0.72	+0.6
1,111,971	-		CCNA_01024	0.72	-0.2
1,111,971	-		CCNA_01024	0.72	+1.5
1,111,971	-		CCNA_01024	0.72	+0.9
1,111,971	-		CCNA_01024	0.72	+0.5
1,112,028	+		CCNA_01024	0.83	+0.6
1,112,036	-		CCNA_01024	0.85	+0.5
1,112,036	-		CCNA_01024	0.85	-0.3
1,112,036	-		CCNA_01024	0.85	-0.0
1,112,036	-		CCNA_01024	0.85	-1.4
1,112,036	-		CCNA_01024	0.85	+0.8
1,112,056	-		CCNA_01024	0.89	+1.8
1,112,103	+				+0.6
1,112,106	-				+0.6
1,112,109	-				+0.2
1,112,202	-		CCNA_01025	0.12	+1.1
1,112,257	-		CCNA_01025	0.21	+0.1
1,112,317	-		CCNA_01025	0.31	+0.8
1,112,346	+		CCNA_01025	0.36	-1.7
1,112,355	-		CCNA_01025	0.37	+2.3
1,112,377	+		CCNA_01025	0.41	+1.3
1,112,385	-		CCNA_01025	0.42	+0.3
1,112,385	-		CCNA_01025	0.42	+0.2
1,112,385	-		CCNA_01025	0.42	-0.4
1,112,389	+		CCNA_01025	0.42	-1.0
1,112,389	+		CCNA_01025	0.42	-1.0
1,112,397	-		CCNA_01025	0.44	+0.4
1,112,397	-		CCNA_01025	0.44	+1.8
1,112,397	-		CCNA_01025	0.44	+1.4
1,112,404	+		CCNA_01025	0.45	+1.9
1,112,407	-		CCNA_01025	0.45	+0.9
1,112,437	-		CCNA_01025	0.50	+1.1