Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00146

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
156,602	-		CCNA_00144	0.68	+1.7
156,605	+		CCNA_00144	0.68	-1.0
156,605	+		CCNA_00144	0.68	-0.7
156,623	+		CCNA_00144	0.70	-1.2
156,645	+		CCNA_00144	0.72	-2.4
156,645	+		CCNA_00144	0.72	+0.2
156,677	+		CCNA_00144	0.74	-1.6
156,688	-		CCNA_00144	0.75	-1.6
156,699	+		CCNA_00144	0.76	-3.0
156,802	-		CCNA_00144	0.85	+0.5
156,816	-		CCNA_00144	0.86	+2.2
156,819	+		CCNA_00144	0.87	-1.9
156,819	+		CCNA_00144	0.87	-0.1
156,819	+		CCNA_00144	0.87	+1.3
156,820	-		CCNA_00144	0.87	-1.4
156,827	-		CCNA_00144	0.87	-2.5
156,827	-		CCNA_00144	0.87	+1.8
156,845	+		CCNA_00144	0.89	-2.7
156,888	+				+0.7
156,888	+				+2.1
156,888	+				-0.1
156,896	-				+0.7
156,896	-				-0.1
156,921	+				-1.2
156,921	+				-1.5
156,921	+				+1.4
156,921	+				-1.1
156,921	+				-0.5
156,929	-				-1.6
156,929	-				+1.1
156,929	-				+0.1
156,965	-				+0.5
156,982	+				-0.9
157,053	+		CCNA_00145	0.14	+0.2
157,053	+		CCNA_00145	0.14	-1.7
157,060	+		CCNA_00145	0.16	-1.1
157,061	-		CCNA_00145	0.16	-0.3
157,061	-		CCNA_00145	0.16	+1.6
157,061	-		CCNA_00145	0.16	+1.2
157,061	-		CCNA_00145	0.16	-0.4
157,061	-		CCNA_00145	0.16	+0.8
157,061	-		CCNA_00145	0.16	-0.4
157,062	-		CCNA_00145	0.16	-0.1
157,062	-		CCNA_00145	0.16	-1.7
157,080	+		CCNA_00145	0.19	-1.2
157,080	+		CCNA_00145	0.19	+0.7
157,093	-		CCNA_00145	0.21	-0.7
157,122	+		CCNA_00145	0.26	+0.2
157,130	-		CCNA_00145	0.27	+0.2
157,151	-		CCNA_00145	0.31	+0.7
157,151	-		CCNA_00145	0.31	-1.8
157,152	-		CCNA_00145	0.31	-0.2
157,157	-		CCNA_00145	0.32	+0.9
157,176	+		CCNA_00145	0.35	+0.1
157,176	+		CCNA_00145	0.35	-2.1
157,176	+		CCNA_00145	0.35	-0.2
157,184	-		CCNA_00145	0.36	+0.0
157,184	-		CCNA_00145	0.36	-0.4
157,187	+		CCNA_00145	0.37	-1.9
157,187	+		CCNA_00145	0.37	+0.0
157,197	+		CCNA_00145	0.38	-1.4
157,197	+		CCNA_00145	0.38	+2.4
157,233	-		CCNA_00145	0.44	+1.5
157,237	-		CCNA_00145	0.45	-0.5
157,237	-		CCNA_00145	0.45	-1.0
157,239	+		CCNA_00145	0.45	+0.9
157,239	+		CCNA_00145	0.45	+0.4
157,248	-		CCNA_00145	0.47	+0.5
157,269	+		CCNA_00145	0.50	+3.1
157,277	-		CCNA_00145	0.52	-1.2
157,277	-		CCNA_00145	0.52	-0.7
157,284	+		CCNA_00145	0.53	+2.4
157,288	-		CCNA_00145	0.53	+0.8
157,325	-		CCNA_00145	0.60	-1.2
157,325	-		CCNA_00145	0.60	-2.6
157,345	-		CCNA_00145	0.63	-0.3
157,345	-		CCNA_00145	0.63	-2.5
157,364	+		CCNA_00145	0.66	+1.7
157,364	+		CCNA_00145	0.66	-1.0
157,373	+		CCNA_00145	0.67	+1.5
157,374	-		CCNA_00145	0.68	+0.5
157,381	-		CCNA_00145	0.69	-1.7
157,381	-		CCNA_00145	0.69	+0.4
157,381	-		CCNA_00145	0.69	+0.7
157,390	+		CCNA_00145	0.70	-2.0
157,390	+		CCNA_00145	0.70	-1.0
157,398	-		CCNA_00145	0.72	+1.1
157,398	-		CCNA_00145	0.72	-1.0
157,398	-		CCNA_00145	0.72	-1.1
157,398	-		CCNA_00145	0.72	-1.4
157,398	-		CCNA_00145	0.72	-0.0
157,398	-		CCNA_00145	0.72	-0.1
157,434	-		CCNA_00145	0.78	-0.3
157,445	+		CCNA_00145	0.79	-0.7
157,500	+		CCNA_00145	0.89	-1.1
157,516	+				-0.2
157,517	+				+0.4
157,538	+				-0.9
157,550	+				-1.4
157,550	+				+1.4
157,681	-		CCNA_00146	0.15	+0.5
157,695	-		CCNA_00146	0.17	+0.7
157,705	-		CCNA_00146	0.19	-1.0
157,741	-		CCNA_00146	0.25	-2.5
157,748	-		CCNA_00146	0.26	-2.3
157,773	+		CCNA_00146	0.30	-0.1
157,773	+		CCNA_00146	0.30	-0.6
157,773	+		CCNA_00146	0.30	+1.2
157,775	+		CCNA_00146	0.31	-1.6
157,781	-		CCNA_00146	0.32	-0.8
157,814	+		CCNA_00146	0.37	-0.6
157,814	+		CCNA_00146	0.37	+0.2
157,860	+		CCNA_00146	0.45	-2.2
157,868	-		CCNA_00146	0.46	-1.1
157,868	-		CCNA_00146	0.46	+0.5
157,868	-		CCNA_00146	0.46	+0.9
157,868	-		CCNA_00146	0.46	+0.2
157,868	-		CCNA_00146	0.46	-1.2
157,887	+		CCNA_00146	0.49	-2.2
157,902	+		CCNA_00146	0.52	-0.5
157,948	+		CCNA_00146	0.60	+0.7
157,948	+		CCNA_00146	0.60	-1.7
157,948	+		CCNA_00146	0.60	-1.1
157,956	-		CCNA_00146	0.61	-2.1
157,956	-		CCNA_00146	0.61	-2.0
157,965	+		CCNA_00146	0.63	-0.9
157,978	-		CCNA_00146	0.65	-2.7
158,016	-		CCNA_00146	0.71	-1.2
158,071	+		CCNA_00146	0.80	+0.8
158,079	-		CCNA_00146	0.82	-0.7
158,124	+		CCNA_00146	0.89	+1.9
158,128	+				+0.3
158,139	+				-2.0
158,147	-				-2.5
158,149	-				-1.2
158,172	-				-1.4
158,174	+				+2.4
158,181	+				+0.5
158,181	+				+0.1
158,189	-				-0.6
158,194	-				+1.4
158,291	+				+2.9
158,294	-				+0.7
158,299	-				-0.3
158,299	-				+0.9
158,309	-				-0.5
158,334	+				-0.8
158,366	+		CCNA_00147	0.10	+1.5
158,434	+		CCNA_00147	0.68	-0.5
158,463	+				+1.2
158,463	+				+0.3
158,464	-				-0.7
158,465	+				-0.8
158,465	+				-0.4
158,465	+				+1.0
158,465	+				-0.2
158,471	-				-1.6
158,471	-				-0.4
158,492	-				-1.2
158,492	-				+2.1
158,517	+				-2.5
158,532	+				-1.2
158,553	+				-0.4
158,553	+				+0.4
158,553	+				+0.7
158,602	+		CCNA_00148	0.10	-0.9
158,620	-		CCNA_00148	0.14	+0.7
158,652	-		CCNA_00148	0.20	-0.6
158,668	-		CCNA_00148	0.23	-0.1
158,670	+		CCNA_00148	0.23	-0.0
158,670	-		CCNA_00148	0.23	-1.2
158,673	-		CCNA_00148	0.24	-2.2
158,707	+		CCNA_00148	0.30	-2.3
158,738	+		CCNA_00148	0.36	-1.0
158,764	+		CCNA_00148	0.41	-0.2
158,772	-		CCNA_00148	0.42	+1.7
158,774	+		CCNA_00148	0.43	+0.1
158,813	+		CCNA_00148	0.50	-1.2
158,819	+		CCNA_00148	0.51	-1.6
158,889	-		CCNA_00148	0.64	-2.3
158,901	+		CCNA_00148	0.66	-0.5
158,956	+		CCNA_00148	0.77	-1.1
158,957	+		CCNA_00148	0.77	-0.0
158,964	-		CCNA_00148	0.78	-2.8
158,982	-		CCNA_00148	0.82	-0.6
159,076	-				-0.2
159,078	+				-1.1
159,078	+				-0.8
159,111	+				+0.5
159,119	-		CCNA_00149	0.10	-0.8
159,124	+		CCNA_00149	0.12	-0.0
159,132	-		CCNA_00149	0.16	-2.1
159,166	-		CCNA_00149	0.31	-2.2