Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_934 and Ac3H11_935 are separated by 122 nucleotides Ac3H11_935 and Ac3H11_936 are separated by 102 nucleotides
Ac3H11_934 - Cell division trigger factor (EC 5.2.1.8), at 51,429 to 52,742
_934
Ac3H11_935 - ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92), at 52,865 to 53,473
_935
Ac3H11_936 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 53,576 to 54,841
_936
Position (kb) 52
53
54 Strain fitness (log2 ratio) -2
-1
0
1 at 52.095 kb on + strand, within Ac3H11_934 at 52.095 kb on + strand, within Ac3H11_934 at 52.095 kb on + strand, within Ac3H11_934 at 52.095 kb on + strand, within Ac3H11_934 at 52.096 kb on - strand, within Ac3H11_934 at 52.096 kb on - strand, within Ac3H11_934 at 52.575 kb on + strand, within Ac3H11_934 at 52.575 kb on + strand, within Ac3H11_934 at 52.576 kb on - strand, within Ac3H11_934 at 52.576 kb on - strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.605 kb on + strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.606 kb on - strand, within Ac3H11_934 at 52.838 kb on + strand at 52.839 kb on - strand at 52.843 kb on + strand at 53.525 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 52,095 + Ac3H11_934 0.51 +0.9 52,095 + Ac3H11_934 0.51 -2.0 52,095 + Ac3H11_934 0.51 +1.1 52,095 + Ac3H11_934 0.51 +0.2 52,096 - Ac3H11_934 0.51 +1.0 52,096 - Ac3H11_934 0.51 -0.7 52,575 + Ac3H11_934 0.87 +0.9 52,575 + Ac3H11_934 0.87 +0.3 52,576 - Ac3H11_934 0.87 -1.3 52,576 - Ac3H11_934 0.87 +0.5 52,605 + Ac3H11_934 0.89 -2.0 52,605 + Ac3H11_934 0.89 -1.0 52,605 + Ac3H11_934 0.89 -1.5 52,605 + Ac3H11_934 0.89 -0.8 52,605 + Ac3H11_934 0.89 -0.1 52,606 - Ac3H11_934 0.90 +0.5 52,606 - Ac3H11_934 0.90 +0.2 52,838 + -0.2 52,839 - -0.8 52,843 + +0.6 53,525 + -0.3
Or see this region's nucleotide sequence