Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4988 and Ac3H11_4989 are separated by 101 nucleotides Ac3H11_4989 and Ac3H11_4990 are separated by 218 nucleotides Ac3H11_4990 and Ac3H11_4991 are separated by 16 nucleotides
Ac3H11_4988 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 151,932 to 153,734
_4988
Ac3H11_4989 - Enoyl-CoA hydratase (EC 4.2.1.17), at 153,836 to 154,636
_4989
Ac3H11_4990 - Pirin, at 154,855 to 155,604
_4990
Ac3H11_4991 - Cation transport protein chaC, at 155,621 to 156,364
_4991
Position (kb) 153
154
155 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 152.854 kb on - strand, within Ac3H11_4988 at 152.919 kb on + strand, within Ac3H11_4988 at 152.919 kb on + strand, within Ac3H11_4988 at 152.920 kb on - strand, within Ac3H11_4988 at 152.931 kb on + strand, within Ac3H11_4988 at 152.931 kb on + strand, within Ac3H11_4988 at 152.931 kb on + strand, within Ac3H11_4988 at 152.932 kb on - strand, within Ac3H11_4988 at 152.932 kb on - strand, within Ac3H11_4988 at 153.066 kb on + strand, within Ac3H11_4988 at 153.066 kb on + strand, within Ac3H11_4988 at 153.066 kb on + strand, within Ac3H11_4988 at 153.066 kb on + strand, within Ac3H11_4988 at 153.066 kb on + strand, within Ac3H11_4988 at 153.067 kb on - strand, within Ac3H11_4988 at 153.067 kb on - strand, within Ac3H11_4988 at 153.067 kb on - strand, within Ac3H11_4988 at 153.067 kb on - strand, within Ac3H11_4988 at 153.067 kb on - strand, within Ac3H11_4988 at 153.067 kb on - strand, within Ac3H11_4988 at 153.219 kb on + strand, within Ac3H11_4988 at 153.220 kb on - strand, within Ac3H11_4988 at 153.220 kb on - strand, within Ac3H11_4988 at 153.220 kb on - strand, within Ac3H11_4988 at 153.220 kb on - strand, within Ac3H11_4988 at 153.516 kb on + strand, within Ac3H11_4988 at 153.693 kb on + strand at 153.693 kb on + strand at 153.693 kb on + strand at 153.694 kb on - strand at 153.694 kb on - strand at 153.702 kb on + strand at 153.702 kb on + strand at 153.702 kb on + strand at 153.703 kb on - strand at 153.703 kb on - strand at 153.726 kb on + strand at 153.726 kb on + strand at 153.727 kb on - strand at 153.796 kb on + strand at 153.797 kb on - strand at 154.214 kb on + strand, within Ac3H11_4989 at 154.214 kb on + strand, within Ac3H11_4989 at 154.214 kb on + strand, within Ac3H11_4989 at 154.215 kb on - strand, within Ac3H11_4989 at 154.253 kb on + strand, within Ac3H11_4989 at 154.253 kb on + strand, within Ac3H11_4989 at 154.254 kb on - strand, within Ac3H11_4989 at 154.254 kb on - strand, within Ac3H11_4989 at 154.472 kb on + strand, within Ac3H11_4989 at 154.726 kb on - strand at 154.790 kb on + strand at 154.790 kb on + strand at 154.791 kb on - strand at 154.791 kb on - strand at 154.791 kb on - strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.799 kb on + strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.800 kb on - strand at 154.939 kb on + strand, within Ac3H11_4990 at 154.940 kb on - strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.053 kb on + strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.054 kb on - strand, within Ac3H11_4990 at 155.284 kb on + strand, within Ac3H11_4990 at 155.284 kb on + strand, within Ac3H11_4990 at 155.284 kb on + strand, within Ac3H11_4990 at 155.285 kb on - strand, within Ac3H11_4990 at 155.285 kb on - strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.458 kb on + strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.459 kb on - strand, within Ac3H11_4990 at 155.603 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 152,854 - Ac3H11_4988 0.51 +1.1 152,919 + Ac3H11_4988 0.55 +0.9 152,919 + Ac3H11_4988 0.55 +0.9 152,920 - Ac3H11_4988 0.55 -0.2 152,931 + Ac3H11_4988 0.55 +1.6 152,931 + Ac3H11_4988 0.55 +0.4 152,931 + Ac3H11_4988 0.55 -0.3 152,932 - Ac3H11_4988 0.55 -0.6 152,932 - Ac3H11_4988 0.55 -0.1 153,066 + Ac3H11_4988 0.63 -1.6 153,066 + Ac3H11_4988 0.63 -0.3 153,066 + Ac3H11_4988 0.63 +0.6 153,066 + Ac3H11_4988 0.63 +2.3 153,066 + Ac3H11_4988 0.63 +0.8 153,067 - Ac3H11_4988 0.63 -3.0 153,067 - Ac3H11_4988 0.63 -0.7 153,067 - Ac3H11_4988 0.63 -0.2 153,067 - Ac3H11_4988 0.63 -0.3 153,067 - Ac3H11_4988 0.63 -1.9 153,067 - Ac3H11_4988 0.63 -1.5 153,219 + Ac3H11_4988 0.71 +1.7 153,220 - Ac3H11_4988 0.71 +0.5 153,220 - Ac3H11_4988 0.71 -0.3 153,220 - Ac3H11_4988 0.71 +0.4 153,220 - Ac3H11_4988 0.71 +1.2 153,516 + Ac3H11_4988 0.88 -0.9 153,693 + -0.1 153,693 + -0.8 153,693 + +0.6 153,694 - -1.6 153,694 - -0.6 153,702 + +0.8 153,702 + +0.1 153,702 + +0.1 153,703 - +0.3 153,703 - +1.2 153,726 + +1.6 153,726 + +1.0 153,727 - -1.0 153,796 + -1.5 153,797 - -0.9 154,214 + Ac3H11_4989 0.47 -1.4 154,214 + Ac3H11_4989 0.47 +0.4 154,214 + Ac3H11_4989 0.47 +0.8 154,215 - Ac3H11_4989 0.47 -0.8 154,253 + Ac3H11_4989 0.52 +0.2 154,253 + Ac3H11_4989 0.52 +0.6 154,254 - Ac3H11_4989 0.52 -1.5 154,254 - Ac3H11_4989 0.52 -2.6 154,472 + Ac3H11_4989 0.79 -1.0 154,726 - +0.8 154,790 + +2.0 154,790 + +0.6 154,791 - +0.3 154,791 - -0.3 154,791 - +1.3 154,799 + -1.4 154,799 + -0.3 154,799 + +0.3 154,799 + -2.3 154,799 + -0.1 154,799 + +0.0 154,799 + -1.3 154,799 + -0.1 154,799 + +0.6 154,800 - +1.2 154,800 - -0.6 154,800 - +0.1 154,800 - +1.3 154,800 - +0.5 154,800 - -1.0 154,800 - -0.1 154,939 + Ac3H11_4990 0.11 -0.2 154,940 - Ac3H11_4990 0.11 +0.1 155,053 + Ac3H11_4990 0.26 +1.2 155,053 + Ac3H11_4990 0.26 -0.4 155,053 + Ac3H11_4990 0.26 -0.2 155,053 + Ac3H11_4990 0.26 -0.5 155,053 + Ac3H11_4990 0.26 +0.3 155,053 + Ac3H11_4990 0.26 +0.4 155,053 + Ac3H11_4990 0.26 +0.7 155,053 + Ac3H11_4990 0.26 -0.2 155,053 + Ac3H11_4990 0.26 -1.4 155,053 + Ac3H11_4990 0.26 +0.3 155,053 + Ac3H11_4990 0.26 +1.9 155,054 - Ac3H11_4990 0.27 -0.7 155,054 - Ac3H11_4990 0.27 +0.3 155,054 - Ac3H11_4990 0.27 +0.2 155,054 - Ac3H11_4990 0.27 +1.6 155,054 - Ac3H11_4990 0.27 -0.5 155,054 - Ac3H11_4990 0.27 -0.4 155,054 - Ac3H11_4990 0.27 +0.9 155,054 - Ac3H11_4990 0.27 -0.9 155,054 - Ac3H11_4990 0.27 -0.3 155,054 - Ac3H11_4990 0.27 -0.3 155,054 - Ac3H11_4990 0.27 +0.6 155,284 + Ac3H11_4990 0.57 -0.4 155,284 + Ac3H11_4990 0.57 -0.8 155,284 + Ac3H11_4990 0.57 +1.8 155,285 - Ac3H11_4990 0.57 -0.1 155,285 - Ac3H11_4990 0.57 -0.7 155,458 + Ac3H11_4990 0.80 +0.0 155,458 + Ac3H11_4990 0.80 -0.7 155,458 + Ac3H11_4990 0.80 -0.2 155,458 + Ac3H11_4990 0.80 -0.2 155,458 + Ac3H11_4990 0.80 +0.6 155,458 + Ac3H11_4990 0.80 -0.3 155,458 + Ac3H11_4990 0.80 +0.3 155,458 + Ac3H11_4990 0.80 +0.4 155,458 + Ac3H11_4990 0.80 -0.8 155,458 + Ac3H11_4990 0.80 +0.2 155,459 - Ac3H11_4990 0.81 +0.2 155,459 - Ac3H11_4990 0.81 +0.4 155,459 - Ac3H11_4990 0.81 +0.0 155,459 - Ac3H11_4990 0.81 -0.5 155,459 - Ac3H11_4990 0.81 -1.2 155,459 - Ac3H11_4990 0.81 -0.9 155,459 - Ac3H11_4990 0.81 -1.6 155,459 - Ac3H11_4990 0.81 -0.5 155,459 - Ac3H11_4990 0.81 +0.6 155,603 - +0.2
Or see this region's nucleotide sequence