Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_340 and Ac3H11_341 are separated by 29 nucleotides Ac3H11_341 and Ac3H11_342 are separated by 90 nucleotides
Ac3H11_340 - 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34), at 16,444 to 18,510
_340
Ac3H11_341 - FIG00455124: hypothetical protein, at 18,540 to 18,980
_341
Ac3H11_342 - Osmolarity sensory histidine kinase EnvZ, at 19,071 to 20,594
_342
Position (kb) 18
19 Strain fitness (log2 ratio) -2
-1
0
1 at 17.782 kb on + strand, within Ac3H11_340 at 17.783 kb on - strand, within Ac3H11_340 at 17.786 kb on - strand, within Ac3H11_340 at 17.866 kb on + strand, within Ac3H11_340 at 17.894 kb on + strand, within Ac3H11_340 at 17.894 kb on + strand, within Ac3H11_340 at 17.894 kb on + strand, within Ac3H11_340 at 17.894 kb on + strand, within Ac3H11_340 at 17.894 kb on + strand, within Ac3H11_340 at 17.895 kb on - strand, within Ac3H11_340 at 17.947 kb on + strand, within Ac3H11_340 at 17.947 kb on + strand, within Ac3H11_340 at 17.947 kb on + strand, within Ac3H11_340 at 17.948 kb on - strand, within Ac3H11_340 at 18.276 kb on - strand, within Ac3H11_340 at 18.280 kb on + strand, within Ac3H11_340 at 18.280 kb on + strand, within Ac3H11_340 at 18.281 kb on - strand, within Ac3H11_340 at 18.391 kb on + strand at 18.391 kb on + strand at 18.392 kb on - strand at 18.392 kb on - strand at 18.392 kb on - strand at 18.687 kb on + strand, within Ac3H11_341 at 18.688 kb on - strand, within Ac3H11_341 at 18.688 kb on - strand, within Ac3H11_341 at 18.688 kb on - strand, within Ac3H11_341 at 18.753 kb on + strand, within Ac3H11_341 at 18.753 kb on + strand, within Ac3H11_341 at 18.753 kb on + strand, within Ac3H11_341 at 18.753 kb on + strand, within Ac3H11_341 at 18.754 kb on - strand, within Ac3H11_341 at 18.754 kb on - strand, within Ac3H11_341 at 18.754 kb on - strand, within Ac3H11_341 at 18.950 kb on + strand at 18.950 kb on + strand at 18.951 kb on - strand at 18.951 kb on - strand at 18.951 kb on - strand at 19.072 kb on + strand at 19.072 kb on + strand at 19.073 kb on - strand at 19.073 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 17,782 + Ac3H11_340 0.65 +0.8 17,783 - Ac3H11_340 0.65 +0.9 17,786 - Ac3H11_340 0.65 +0.3 17,866 + Ac3H11_340 0.69 +1.2 17,894 + Ac3H11_340 0.70 -0.7 17,894 + Ac3H11_340 0.70 -2.7 17,894 + Ac3H11_340 0.70 -0.7 17,894 + Ac3H11_340 0.70 +0.3 17,894 + Ac3H11_340 0.70 +0.5 17,895 - Ac3H11_340 0.70 -1.3 17,947 + Ac3H11_340 0.73 +0.7 17,947 + Ac3H11_340 0.73 +0.2 17,947 + Ac3H11_340 0.73 +0.2 17,948 - Ac3H11_340 0.73 -0.1 18,276 - Ac3H11_340 0.89 -0.2 18,280 + Ac3H11_340 0.89 -0.0 18,280 + Ac3H11_340 0.89 +0.9 18,281 - Ac3H11_340 0.89 -2.6 18,391 + +0.3 18,391 + +0.0 18,392 - +0.4 18,392 - +1.7 18,392 - -2.5 18,687 + Ac3H11_341 0.33 +0.1 18,688 - Ac3H11_341 0.34 -0.3 18,688 - Ac3H11_341 0.34 +0.2 18,688 - Ac3H11_341 0.34 +0.3 18,753 + Ac3H11_341 0.48 -1.9 18,753 + Ac3H11_341 0.48 -0.4 18,753 + Ac3H11_341 0.48 +0.6 18,753 + Ac3H11_341 0.48 +0.5 18,754 - Ac3H11_341 0.49 +0.2 18,754 - Ac3H11_341 0.49 -2.0 18,754 - Ac3H11_341 0.49 -2.5 18,950 + -1.2 18,950 + -0.2 18,951 - +0.6 18,951 - -0.6 18,951 - +0.1 19,072 + -0.1 19,072 + +0.7 19,073 - +0.3 19,073 - +0.2
Or see this region's nucleotide sequence