Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2388 and Ac3H11_2389 are separated by 181 nucleotides Ac3H11_2389 and Ac3H11_2390 are separated by 35 nucleotides Ac3H11_2390 and Ac3H11_2391 are separated by 26 nucleotides
Ac3H11_2388 - Adenylate kinase (EC 2.7.4.3), at 647,260 to 647,916
_2388
Ac3H11_2389 - hypothetical protein, at 648,098 to 648,568
_2389
Ac3H11_2390 - putative membrane protein, at 648,604 to 649,023
_2390
Ac3H11_2391 - L-asparaginase (EC 3.5.1.1), at 649,050 to 650,003
_2391
Position (kb)
648
649
650 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 647.928 kb on - strand at 647.939 kb on + strand at 647.939 kb on + strand at 647.970 kb on - strand at 648.009 kb on + strand at 648.073 kb on + strand at 648.073 kb on + strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.075 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.124 kb on - strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.148 kb on - strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.466 kb on - strand, within Ac3H11_2389 at 648.568 kb on + strand at 648.568 kb on + strand at 648.568 kb on + strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.606 kb on - strand at 648.606 kb on - strand at 648.611 kb on + strand at 648.612 kb on - strand at 648.612 kb on - strand at 648.989 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.033 kb on + strand at 649.033 kb on + strand at 649.033 kb on + strand at 649.034 kb on - strand at 649.034 kb on - strand at 649.377 kb on - strand, within Ac3H11_2391 at 649.382 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.900 kb on - strand, within Ac3H11_2391 at 649.900 kb on - strand, within Ac3H11_2391 at 649.921 kb on + strand at 649.922 kb on - strand at 649.953 kb on - strand at 650.009 kb on + strand at 650.010 kb on - strand at 650.010 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 647,928 - +1.6 647,939 + -0.3 647,939 + +1.0 647,970 - -0.9 648,009 + -2.7 648,073 + -0.1 648,073 + +0.5 648,074 - +0.2 648,074 - +0.7 648,074 - +0.6 648,075 + -2.0 648,123 + +1.5 648,123 + -0.4 648,123 + +0.1 648,124 - +0.5 648,141 + +0.8 648,141 + +0.1 648,141 + -1.3 648,141 + -1.4 648,141 + -2.0 648,141 + +0.5 648,141 + +0.3 648,141 + -1.0 648,141 + -0.3 648,141 + -0.2 648,141 + +1.2 648,141 + +0.1 648,141 + -0.3 648,141 + +0.7 648,141 + +1.1 648,141 + -0.1 648,142 - +0.4 648,142 - +0.4 648,142 - -0.1 648,142 - +1.9 648,142 - +0.1 648,142 - +0.6 648,142 - +1.1 648,142 - -0.5 648,142 - +0.2 648,142 - -0.1 648,142 - +0.0 648,142 - +1.3 648,142 - +0.3 648,142 - +0.8 648,147 + Ac3H11_2389 0.10 -1.2 648,147 + Ac3H11_2389 0.10 +1.1 648,147 + Ac3H11_2389 0.10 +1.9 648,147 + Ac3H11_2389 0.10 +1.5 648,148 - Ac3H11_2389 0.11 +0.7 648,465 + Ac3H11_2389 0.78 -0.3 648,465 + Ac3H11_2389 0.78 +0.3 648,465 + Ac3H11_2389 0.78 +0.4 648,465 + Ac3H11_2389 0.78 -0.1 648,465 + Ac3H11_2389 0.78 +1.2 648,465 + Ac3H11_2389 0.78 -1.4 648,465 + Ac3H11_2389 0.78 -0.2 648,465 + Ac3H11_2389 0.78 -1.0 648,466 - Ac3H11_2389 0.78 -0.1 648,568 + +0.2 648,568 + +0.5 648,568 + -1.7 648,569 - -0.1 648,569 - +0.4 648,569 - -0.9 648,569 - +0.2 648,569 - -1.2 648,606 - -0.1 648,606 - +1.1 648,611 + +0.2 648,612 - -2.4 648,612 - -0.9 648,989 + +0.3 649,023 + +0.4 649,023 + +0.8 649,023 + -1.5 649,023 + -0.4 649,023 + -0.6 649,023 + -0.4 649,023 + -0.9 649,023 + -1.3 649,023 + -0.6 649,023 + +1.3 649,023 + +0.0 649,023 + -0.5 649,023 + +0.8 649,023 + -1.8 649,024 - -0.2 649,024 - +0.6 649,024 - -0.6 649,024 - -0.3 649,024 - -0.7 649,024 - +0.1 649,024 - +0.4 649,024 - -1.0 649,024 - -1.3 649,024 - -0.4 649,024 - -0.3 649,024 - +1.1 649,029 + +0.1 649,029 + -1.6 649,029 + +1.2 649,029 + +0.6 649,029 + +0.4 649,029 + -1.3 649,029 + -0.8 649,029 + -1.1 649,029 + -1.3 649,029 + -3.4 649,030 - +0.1 649,030 - -0.6 649,030 - +0.1 649,030 - -0.2 649,030 - -0.4 649,030 - -0.9 649,030 - +1.3 649,030 - +0.4 649,030 - -1.7 649,030 - +1.0 649,033 + +0.0 649,033 + +0.7 649,033 + -0.5 649,034 - -1.5 649,034 - +0.1 649,377 - Ac3H11_2391 0.34 -0.7 649,382 + Ac3H11_2391 0.35 +0.1 649,899 + Ac3H11_2391 0.89 -2.5 649,899 + Ac3H11_2391 0.89 -1.2 649,899 + Ac3H11_2391 0.89 +0.2 649,899 + Ac3H11_2391 0.89 -2.1 649,900 - Ac3H11_2391 0.89 -0.8 649,900 - Ac3H11_2391 0.89 -0.5 649,921 + -0.9 649,922 - -0.8 649,953 - +0.4 650,009 + -2.4 650,010 - -0.8 650,010 - -0.4
Or see this region's nucleotide sequence