Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2265 and Ac3H11_2266 are separated by 74 nucleotides Ac3H11_2266 and Ac3H11_2267 are separated by 60 nucleotides Ac3H11_2267 and Ac3H11_2268 are separated by 321 nucleotides
Ac3H11_2265 - FIG146518: Zn-dependent hydrolases, including glyoxylases, at 499,203 to 500,063
_2265
Ac3H11_2266 - Permeases of the major facilitator superfamily, at 500,138 to 500,299
_2266
Ac3H11_2267 - Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44), at 500,360 to 500,713
_2267
Ac3H11_2268 - hypothetical protein, at 501,035 to 501,520
_2268
Position (kb) 500
501 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 499.138 kb on - strand at 499.216 kb on + strand at 499.216 kb on + strand at 499.216 kb on + strand at 499.217 kb on - strand at 499.217 kb on - strand at 499.217 kb on - strand at 499.217 kb on - strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.254 kb on + strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.255 kb on - strand at 499.263 kb on + strand at 499.263 kb on + strand at 499.264 kb on - strand at 499.264 kb on - strand at 499.264 kb on - strand at 499.264 kb on - strand at 499.264 kb on - strand at 499.264 kb on - strand at 499.264 kb on - strand at 499.311 kb on + strand, within Ac3H11_2265 at 499.369 kb on + strand, within Ac3H11_2265 at 499.369 kb on + strand, within Ac3H11_2265 at 499.443 kb on + strand, within Ac3H11_2265 at 499.443 kb on + strand, within Ac3H11_2265 at 499.443 kb on + strand, within Ac3H11_2265 at 499.443 kb on + strand, within Ac3H11_2265 at 499.443 kb on + strand, within Ac3H11_2265 at 499.444 kb on - strand, within Ac3H11_2265 at 499.444 kb on - strand, within Ac3H11_2265 at 499.444 kb on - strand, within Ac3H11_2265 at 499.657 kb on - strand, within Ac3H11_2265 at 499.657 kb on - strand, within Ac3H11_2265 at 499.755 kb on + strand, within Ac3H11_2265 at 499.756 kb on - strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.803 kb on + strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 499.804 kb on - strand, within Ac3H11_2265 at 500.034 kb on + strand at 500.035 kb on - strand at 500.035 kb on - strand at 500.035 kb on - strand at 500.035 kb on - strand at 500.035 kb on - strand at 500.258 kb on + strand, within Ac3H11_2266 at 500.258 kb on + strand, within Ac3H11_2266 at 500.258 kb on + strand, within Ac3H11_2266 at 500.259 kb on - strand, within Ac3H11_2266 at 500.259 kb on - strand, within Ac3H11_2266 at 500.259 kb on - strand, within Ac3H11_2266 at 500.297 kb on + strand at 500.297 kb on + strand at 500.297 kb on + strand at 500.297 kb on + strand at 500.298 kb on - strand at 500.298 kb on - strand at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.633 kb on + strand, within Ac3H11_2267 at 500.634 kb on - strand, within Ac3H11_2267 at 500.634 kb on - strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.660 kb on + strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.661 kb on - strand, within Ac3H11_2267 at 500.788 kb on + strand at 500.788 kb on + strand at 500.789 kb on - strand at 500.789 kb on - strand at 500.789 kb on - strand at 500.789 kb on - strand at 500.817 kb on + strand at 500.877 kb on - strand at 500.877 kb on - strand at 500.877 kb on - strand at 500.879 kb on + strand at 500.879 kb on + strand at 500.879 kb on + strand at 500.880 kb on - strand at 500.880 kb on - strand at 500.880 kb on - strand at 500.923 kb on + strand at 500.924 kb on - strand at 500.925 kb on + strand at 500.926 kb on - strand at 500.951 kb on - strand at 501.065 kb on + strand at 501.065 kb on + strand at 501.066 kb on - strand at 501.066 kb on - strand at 501.066 kb on - strand at 501.224 kb on + strand, within Ac3H11_2268
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 499,138 - +0.3 499,216 + +0.9 499,216 + -1.2 499,216 + -1.2 499,217 - +0.4 499,217 - +0.3 499,217 - -0.4 499,217 - -0.0 499,254 + +0.6 499,254 + -0.5 499,254 + +0.3 499,254 + -0.8 499,254 + -1.2 499,254 + -0.8 499,254 + +0.5 499,254 + +0.5 499,254 + -3.0 499,254 + +1.0 499,254 + -0.1 499,255 - -0.4 499,255 - -0.0 499,255 - -0.4 499,255 - -0.6 499,255 - +0.0 499,255 - +1.4 499,255 - +1.2 499,255 - +0.7 499,255 - -0.0 499,255 - +0.9 499,255 - +0.3 499,255 - -2.5 499,263 + +0.5 499,263 + -0.4 499,264 - +0.3 499,264 - -1.5 499,264 - +0.1 499,264 - +1.0 499,264 - +0.4 499,264 - +0.0 499,264 - -0.1 499,311 + Ac3H11_2265 0.13 -1.2 499,369 + Ac3H11_2265 0.19 -0.4 499,369 + Ac3H11_2265 0.19 -0.3 499,443 + Ac3H11_2265 0.28 +0.2 499,443 + Ac3H11_2265 0.28 -0.3 499,443 + Ac3H11_2265 0.28 -0.5 499,443 + Ac3H11_2265 0.28 -1.3 499,443 + Ac3H11_2265 0.28 +0.4 499,444 - Ac3H11_2265 0.28 +1.5 499,444 - Ac3H11_2265 0.28 +0.2 499,444 - Ac3H11_2265 0.28 +0.6 499,657 - Ac3H11_2265 0.53 -0.4 499,657 - Ac3H11_2265 0.53 +0.1 499,755 + Ac3H11_2265 0.64 -1.2 499,756 - Ac3H11_2265 0.64 +0.8 499,803 + Ac3H11_2265 0.70 -1.4 499,803 + Ac3H11_2265 0.70 -1.4 499,803 + Ac3H11_2265 0.70 +0.1 499,803 + Ac3H11_2265 0.70 +0.1 499,803 + Ac3H11_2265 0.70 -0.3 499,803 + Ac3H11_2265 0.70 +0.2 499,803 + Ac3H11_2265 0.70 +0.4 499,803 + Ac3H11_2265 0.70 -0.2 499,804 - Ac3H11_2265 0.70 -1.2 499,804 - Ac3H11_2265 0.70 -0.4 499,804 - Ac3H11_2265 0.70 -1.4 499,804 - Ac3H11_2265 0.70 -0.2 499,804 - Ac3H11_2265 0.70 +0.3 499,804 - Ac3H11_2265 0.70 +1.2 499,804 - Ac3H11_2265 0.70 -0.8 499,804 - Ac3H11_2265 0.70 +0.7 499,804 - Ac3H11_2265 0.70 +0.5 499,804 - Ac3H11_2265 0.70 -1.8 500,034 + -0.4 500,035 - -0.9 500,035 - -0.7 500,035 - -1.2 500,035 - -0.1 500,035 - -0.4 500,258 + Ac3H11_2266 0.74 +1.1 500,258 + Ac3H11_2266 0.74 +0.9 500,258 + Ac3H11_2266 0.74 +0.6 500,259 - Ac3H11_2266 0.75 +1.0 500,259 - Ac3H11_2266 0.75 +1.0 500,259 - Ac3H11_2266 0.75 +0.0 500,297 + +0.5 500,297 + -0.9 500,297 + -0.1 500,297 + -0.2 500,298 - +0.2 500,298 - +0.4 500,633 + Ac3H11_2267 0.77 +0.5 500,633 + Ac3H11_2267 0.77 -0.4 500,633 + Ac3H11_2267 0.77 +0.5 500,633 + Ac3H11_2267 0.77 -0.4 500,633 + Ac3H11_2267 0.77 -1.4 500,633 + Ac3H11_2267 0.77 +0.2 500,633 + Ac3H11_2267 0.77 -0.5 500,633 + Ac3H11_2267 0.77 -0.6 500,633 + Ac3H11_2267 0.77 -0.7 500,634 - Ac3H11_2267 0.77 +0.1 500,634 - Ac3H11_2267 0.77 +0.3 500,660 + Ac3H11_2267 0.85 -1.5 500,660 + Ac3H11_2267 0.85 +0.3 500,660 + Ac3H11_2267 0.85 -0.0 500,660 + Ac3H11_2267 0.85 +1.0 500,661 - Ac3H11_2267 0.85 +0.4 500,661 - Ac3H11_2267 0.85 +1.2 500,661 - Ac3H11_2267 0.85 -0.5 500,661 - Ac3H11_2267 0.85 -0.1 500,661 - Ac3H11_2267 0.85 -1.4 500,661 - Ac3H11_2267 0.85 -0.3 500,661 - Ac3H11_2267 0.85 +1.4 500,788 + +0.1 500,788 + -1.2 500,789 - +1.6 500,789 - +0.3 500,789 - -1.1 500,789 - -0.5 500,817 + +0.5 500,877 - +0.6 500,877 - -0.2 500,877 - +1.3 500,879 + -0.5 500,879 + -0.6 500,879 + -0.4 500,880 - +0.9 500,880 - +1.0 500,880 - -0.5 500,923 + -0.6 500,924 - -0.6 500,925 + -1.4 500,926 - +0.3 500,951 - -1.0 501,065 + +0.8 501,065 + +0.4 501,066 - -0.4 501,066 - -0.2 501,066 - +1.4 501,224 + Ac3H11_2268 0.39 +0.6
Or see this region's nucleotide sequence