Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1914 and Ac3H11_1915 are separated by 32 nucleotides Ac3H11_1915 and Ac3H11_1916 are separated by 12 nucleotides Ac3H11_1916 and Ac3H11_1917 are separated by 283 nucleotides
Ac3H11_1914 - Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), at 121,369 to 123,771
_1914
Ac3H11_1915 - FIG00349726: hypothetical protein, at 123,804 to 124,313
_1915
Ac3H11_1916 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 124,326 to 125,525
_1916
Ac3H11_1917 - conserved hypothetical protein, at 125,809 to 126,699
_1917
Position (kb) 124
125
126 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 123.583 kb on + strand at 123.583 kb on + strand at 123.583 kb on + strand at 123.583 kb on + strand at 123.583 kb on + strand at 123.584 kb on - strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.635 kb on + strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.636 kb on - strand at 123.664 kb on + strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.665 kb on - strand at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.883 kb on + strand, within Ac3H11_1915 at 123.884 kb on - strand, within Ac3H11_1915 at 123.917 kb on + strand, within Ac3H11_1915 at 123.918 kb on - strand, within Ac3H11_1915 at 123.918 kb on - strand, within Ac3H11_1915 at 123.918 kb on - strand, within Ac3H11_1915 at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.267 kb on + strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.268 kb on - strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.271 kb on + strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.272 kb on - strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.353 kb on + strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.354 kb on - strand at 124.401 kb on + strand at 124.401 kb on + strand at 124.401 kb on + strand at 124.401 kb on + strand at 125.179 kb on - strand, within Ac3H11_1916 at 125.223 kb on - strand, within Ac3H11_1916 at 125.283 kb on + strand, within Ac3H11_1916 at 125.283 kb on + strand, within Ac3H11_1916 at 125.284 kb on - strand, within Ac3H11_1916 at 125.284 kb on - strand, within Ac3H11_1916 at 125.284 kb on - strand, within Ac3H11_1916 at 125.423 kb on + strand at 125.460 kb on + strand at 125.460 kb on + strand at 125.460 kb on + strand at 125.460 kb on + strand at 125.461 kb on - strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.482 kb on + strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.483 kb on - strand at 125.486 kb on + strand at 125.487 kb on - strand at 125.523 kb on + strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.524 kb on - strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.579 kb on + strand at 125.580 kb on - strand at 125.580 kb on - strand at 125.580 kb on - strand at 125.580 kb on - strand at 125.588 kb on + strand at 125.588 kb on + strand at 125.588 kb on + strand at 125.588 kb on + strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.589 kb on - strand at 125.637 kb on + strand at 125.743 kb on + strand at 125.744 kb on - strand at 125.757 kb on - strand at 125.757 kb on - strand at 125.757 kb on - strand at 125.863 kb on + strand at 125.863 kb on + strand at 125.864 kb on - strand at 125.932 kb on + strand, within Ac3H11_1917 at 125.932 kb on + strand, within Ac3H11_1917 at 125.932 kb on + strand, within Ac3H11_1917 at 125.933 kb on - strand, within Ac3H11_1917 at 125.933 kb on - strand, within Ac3H11_1917 at 125.979 kb on + strand, within Ac3H11_1917 at 125.979 kb on + strand, within Ac3H11_1917 at 125.979 kb on + strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 125.980 kb on - strand, within Ac3H11_1917 at 126.064 kb on + strand, within Ac3H11_1917 at 126.064 kb on + strand, within Ac3H11_1917 at 126.064 kb on + strand, within Ac3H11_1917 at 126.065 kb on - strand, within Ac3H11_1917 at 126.065 kb on - strand, within Ac3H11_1917 at 126.115 kb on + strand, within Ac3H11_1917 at 126.115 kb on + strand, within Ac3H11_1917 at 126.115 kb on + strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.116 kb on - strand, within Ac3H11_1917 at 126.211 kb on + strand, within Ac3H11_1917 at 126.212 kb on - strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.253 kb on + strand, within Ac3H11_1917 at 126.254 kb on - strand, within Ac3H11_1917 at 126.298 kb on + strand, within Ac3H11_1917 at 126.299 kb on - strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.385 kb on + strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.386 kb on - strand, within Ac3H11_1917 at 126.424 kb on + strand, within Ac3H11_1917 at 126.424 kb on + strand, within Ac3H11_1917 at 126.514 kb on + strand, within Ac3H11_1917 at 126.514 kb on + strand, within Ac3H11_1917 at 126.515 kb on - strand, within Ac3H11_1917
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 123,583 + -0.5 123,583 + +0.5 123,583 + +2.0 123,583 + -0.1 123,583 + -0.4 123,584 - -0.2 123,635 + +0.0 123,635 + +0.0 123,635 + +0.6 123,635 + +0.2 123,635 + -0.9 123,635 + -1.4 123,635 + +0.8 123,635 + -1.3 123,635 + -0.1 123,635 + -0.1 123,635 + +0.2 123,635 + +1.1 123,635 + +0.7 123,635 + +0.6 123,635 + +0.7 123,635 + +0.7 123,635 + +0.2 123,636 - -0.2 123,636 - -0.4 123,636 - +1.5 123,636 - -0.3 123,636 - +1.6 123,636 - -1.0 123,636 - -1.1 123,636 - +0.1 123,636 - +1.4 123,636 - +0.2 123,636 - +0.7 123,636 - +0.2 123,664 + -0.4 123,665 - +1.0 123,665 - +0.1 123,665 - -1.7 123,665 - -0.9 123,665 - +0.7 123,883 + Ac3H11_1915 0.15 +0.1 123,883 + Ac3H11_1915 0.15 +0.3 123,883 + Ac3H11_1915 0.15 -2.0 123,883 + Ac3H11_1915 0.15 -0.5 123,883 + Ac3H11_1915 0.15 +0.9 123,884 - Ac3H11_1915 0.16 +0.3 123,917 + Ac3H11_1915 0.22 +0.4 123,918 - Ac3H11_1915 0.22 -0.7 123,918 - Ac3H11_1915 0.22 -0.1 123,918 - Ac3H11_1915 0.22 +0.2 124,267 + -0.2 124,267 + -1.0 124,267 + -0.5 124,267 + +0.3 124,267 + +0.2 124,267 + -0.2 124,268 - -0.2 124,268 - -0.9 124,268 - +0.6 124,268 - -2.5 124,268 - +0.1 124,268 - -0.9 124,268 - +0.1 124,271 + +1.8 124,271 + +0.4 124,271 + -0.7 124,271 + -0.3 124,271 + +0.1 124,271 + +0.4 124,271 + -0.0 124,271 + -1.3 124,271 + +0.4 124,271 + +0.2 124,272 - +0.4 124,272 - -0.2 124,272 - -0.5 124,272 - +0.6 124,272 - -0.1 124,272 - -1.2 124,272 - +0.1 124,272 - -1.2 124,272 - -2.3 124,272 - +0.2 124,353 + +0.3 124,353 + +0.3 124,353 + -0.1 124,353 + +1.7 124,353 + +0.2 124,353 + -0.1 124,354 - -0.6 124,354 - +0.8 124,354 - +1.0 124,354 - +0.8 124,354 - -0.6 124,354 - -0.8 124,354 - +0.4 124,354 - -0.5 124,354 - -0.2 124,401 + +0.5 124,401 + -0.2 124,401 + +1.3 124,401 + -0.2 125,179 - Ac3H11_1916 0.71 +0.6 125,223 - Ac3H11_1916 0.75 +0.6 125,283 + Ac3H11_1916 0.80 +0.7 125,283 + Ac3H11_1916 0.80 +0.1 125,284 - Ac3H11_1916 0.80 +0.3 125,284 - Ac3H11_1916 0.80 +0.5 125,284 - Ac3H11_1916 0.80 +0.3 125,423 + +0.5 125,460 + +0.4 125,460 + -0.5 125,460 + +0.5 125,460 + +1.1 125,461 - +0.3 125,482 + -0.7 125,482 + +1.0 125,482 + -1.0 125,482 + +0.4 125,482 + -0.2 125,482 + +0.6 125,482 + -0.4 125,482 + -2.0 125,482 + +0.3 125,482 + -0.5 125,482 + +1.3 125,482 + -0.8 125,482 + +0.5 125,482 + +0.1 125,482 + +0.2 125,482 + -2.1 125,482 + +0.1 125,483 - -0.2 125,483 - -0.0 125,483 - -0.4 125,483 - +0.9 125,483 - +0.2 125,483 - -0.8 125,483 - -0.4 125,483 - +0.1 125,483 - +0.5 125,483 - +0.5 125,483 - -0.3 125,483 - +0.4 125,483 - -2.0 125,483 - +0.7 125,483 - -2.9 125,483 - +1.1 125,486 + +1.0 125,487 - +0.4 125,523 + +1.6 125,524 - +0.2 125,524 - -0.3 125,524 - -0.2 125,524 - +0.2 125,524 - -0.1 125,524 - +0.9 125,579 + +0.2 125,579 + -0.0 125,579 + +0.1 125,579 + +0.3 125,579 + -2.3 125,580 - -0.4 125,580 - +1.4 125,580 - +0.0 125,580 - +0.2 125,588 + -0.8 125,588 + -0.5 125,588 + -0.8 125,588 + -1.0 125,589 - +0.7 125,589 - -0.7 125,589 - -0.3 125,589 - +0.9 125,589 - -0.7 125,589 - -1.1 125,589 - +0.7 125,637 + +0.4 125,743 + +1.3 125,744 - +1.2 125,757 - -0.9 125,757 - -1.5 125,757 - +0.0 125,863 + -0.3 125,863 + -0.0 125,864 - +0.2 125,932 + Ac3H11_1917 0.14 +0.2 125,932 + Ac3H11_1917 0.14 +0.8 125,932 + Ac3H11_1917 0.14 -0.9 125,933 - Ac3H11_1917 0.14 +0.8 125,933 - Ac3H11_1917 0.14 +0.4 125,979 + Ac3H11_1917 0.19 +0.0 125,979 + Ac3H11_1917 0.19 -0.3 125,979 + Ac3H11_1917 0.19 -1.6 125,980 - Ac3H11_1917 0.19 +0.7 125,980 - Ac3H11_1917 0.19 -1.0 125,980 - Ac3H11_1917 0.19 +1.0 125,980 - Ac3H11_1917 0.19 -0.9 125,980 - Ac3H11_1917 0.19 +0.5 125,980 - Ac3H11_1917 0.19 -1.6 126,064 + Ac3H11_1917 0.29 +0.0 126,064 + Ac3H11_1917 0.29 +1.1 126,064 + Ac3H11_1917 0.29 -0.1 126,065 - Ac3H11_1917 0.29 +0.4 126,065 - Ac3H11_1917 0.29 +0.1 126,115 + Ac3H11_1917 0.34 +0.2 126,115 + Ac3H11_1917 0.34 +0.5 126,115 + Ac3H11_1917 0.34 +0.6 126,116 - Ac3H11_1917 0.34 -0.7 126,116 - Ac3H11_1917 0.34 -2.0 126,116 - Ac3H11_1917 0.34 -3.7 126,116 - Ac3H11_1917 0.34 -0.8 126,211 + Ac3H11_1917 0.45 -0.1 126,212 - Ac3H11_1917 0.45 -0.8 126,253 + Ac3H11_1917 0.50 -0.1 126,253 + Ac3H11_1917 0.50 -0.4 126,253 + Ac3H11_1917 0.50 -0.0 126,253 + Ac3H11_1917 0.50 -1.0 126,253 + Ac3H11_1917 0.50 -1.4 126,254 - Ac3H11_1917 0.50 -0.6 126,298 + Ac3H11_1917 0.55 -0.5 126,299 - Ac3H11_1917 0.55 +1.3 126,385 + Ac3H11_1917 0.65 -0.4 126,385 + Ac3H11_1917 0.65 +0.1 126,385 + Ac3H11_1917 0.65 +0.1 126,385 + Ac3H11_1917 0.65 -0.3 126,385 + Ac3H11_1917 0.65 -0.8 126,385 + Ac3H11_1917 0.65 -0.1 126,385 + Ac3H11_1917 0.65 -0.2 126,385 + Ac3H11_1917 0.65 -0.9 126,385 + Ac3H11_1917 0.65 +0.3 126,385 + Ac3H11_1917 0.65 -0.5 126,385 + Ac3H11_1917 0.65 +0.2 126,385 + Ac3H11_1917 0.65 -0.5 126,386 - Ac3H11_1917 0.65 +1.1 126,386 - Ac3H11_1917 0.65 -0.0 126,386 - Ac3H11_1917 0.65 +0.8 126,386 - Ac3H11_1917 0.65 +0.1 126,386 - Ac3H11_1917 0.65 -1.0 126,386 - Ac3H11_1917 0.65 +1.1 126,386 - Ac3H11_1917 0.65 +0.7 126,386 - Ac3H11_1917 0.65 -0.1 126,386 - Ac3H11_1917 0.65 +0.4 126,386 - Ac3H11_1917 0.65 +0.8 126,386 - Ac3H11_1917 0.65 +0.0 126,386 - Ac3H11_1917 0.65 +1.4 126,386 - Ac3H11_1917 0.65 -2.8 126,386 - Ac3H11_1917 0.65 +0.3 126,424 + Ac3H11_1917 0.69 -0.7 126,424 + Ac3H11_1917 0.69 -0.8 126,514 + Ac3H11_1917 0.79 -0.3 126,514 + Ac3H11_1917 0.79 +0.0 126,515 - Ac3H11_1917 0.79 -1.5
Or see this region's nucleotide sequence