Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04135 and AZOBR_RS04140 are separated by 160 nucleotides AZOBR_RS04140 and AZOBR_RS04145 are separated by 289 nucleotides
AZOBR_RS04135: AZOBR_RS04135 - ABC transporter permease, at 867,125 to 868,117
_RS04135
AZOBR_RS04140: AZOBR_RS04140 - hypothetical protein, at 868,278 to 869,570
_RS04140
AZOBR_RS04145: AZOBR_RS04145 - hypothetical protein, at 869,860 to 871,110
_RS04145
Position (kb) 868
869
870 Strain fitness (log2 ratio) -2
-1
0
1
2 at 867.372 kb on + strand, within AZOBR_RS04135 at 867.372 kb on + strand, within AZOBR_RS04135 at 867.373 kb on - strand, within AZOBR_RS04135 at 867.373 kb on - strand, within AZOBR_RS04135 at 867.597 kb on + strand, within AZOBR_RS04135 at 867.597 kb on + strand, within AZOBR_RS04135 at 867.598 kb on - strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.600 kb on + strand, within AZOBR_RS04135 at 867.601 kb on - strand, within AZOBR_RS04135 at 867.601 kb on - strand, within AZOBR_RS04135 at 867.906 kb on + strand, within AZOBR_RS04135 at 868.026 kb on + strand at 868.027 kb on - strand at 868.027 kb on - strand at 868.177 kb on + strand at 868.178 kb on - strand at 868.178 kb on - strand at 868.178 kb on - strand at 868.399 kb on + strand at 868.400 kb on - strand at 868.400 kb on - strand at 868.459 kb on + strand, within AZOBR_RS04140 at 868.672 kb on + strand, within AZOBR_RS04140 at 868.673 kb on - strand, within AZOBR_RS04140 at 868.756 kb on + strand, within AZOBR_RS04140 at 868.756 kb on + strand, within AZOBR_RS04140 at 868.756 kb on + strand, within AZOBR_RS04140 at 868.756 kb on + strand, within AZOBR_RS04140 at 868.757 kb on - strand, within AZOBR_RS04140 at 868.757 kb on - strand, within AZOBR_RS04140 at 868.757 kb on - strand, within AZOBR_RS04140 at 868.834 kb on + strand, within AZOBR_RS04140 at 868.835 kb on - strand, within AZOBR_RS04140 at 868.835 kb on - strand, within AZOBR_RS04140 at 868.847 kb on - strand, within AZOBR_RS04140 at 868.936 kb on + strand, within AZOBR_RS04140 at 868.969 kb on + strand, within AZOBR_RS04140 at 868.970 kb on - strand, within AZOBR_RS04140 at 869.353 kb on + strand, within AZOBR_RS04140 at 869.353 kb on + strand, within AZOBR_RS04140 at 869.353 kb on + strand, within AZOBR_RS04140 at 869.353 kb on + strand, within AZOBR_RS04140 at 869.353 kb on + strand, within AZOBR_RS04140 at 869.353 kb on + strand, within AZOBR_RS04140 at 869.353 kb on + strand, within AZOBR_RS04140 at 869.354 kb on - strand, within AZOBR_RS04140 at 869.423 kb on - strand, within AZOBR_RS04140 at 869.423 kb on - strand, within AZOBR_RS04140 at 869.423 kb on - strand, within AZOBR_RS04140 at 869.760 kb on + strand at 869.760 kb on + strand at 869.761 kb on - strand at 869.784 kb on - strand at 869.826 kb on + strand at 869.826 kb on + strand at 869.826 kb on + strand at 869.826 kb on + strand at 869.827 kb on - strand at 869.847 kb on - strand at 869.862 kb on - strand at 869.975 kb on + strand at 869.976 kb on - strand at 869.976 kb on - strand at 869.976 kb on - strand at 870.036 kb on - strand, within AZOBR_RS04145 at 870.155 kb on + strand, within AZOBR_RS04145 at 870.155 kb on + strand, within AZOBR_RS04145 at 870.155 kb on + strand, within AZOBR_RS04145 at 870.155 kb on + strand, within AZOBR_RS04145 at 870.155 kb on + strand, within AZOBR_RS04145 at 870.155 kb on + strand, within AZOBR_RS04145 at 870.156 kb on - strand, within AZOBR_RS04145 at 870.156 kb on - strand, within AZOBR_RS04145 at 870.156 kb on - strand, within AZOBR_RS04145 at 870.302 kb on + strand, within AZOBR_RS04145 at 870.332 kb on + strand, within AZOBR_RS04145 at 870.332 kb on + strand, within AZOBR_RS04145 at 870.332 kb on + strand, within AZOBR_RS04145 at 870.332 kb on + strand, within AZOBR_RS04145 at 870.333 kb on - strand, within AZOBR_RS04145 at 870.333 kb on - strand, within AZOBR_RS04145 at 870.333 kb on - strand, within AZOBR_RS04145 at 870.411 kb on - strand, within AZOBR_RS04145 at 870.422 kb on + strand, within AZOBR_RS04145 at 870.422 kb on + strand, within AZOBR_RS04145 at 870.423 kb on - strand, within AZOBR_RS04145 at 870.458 kb on + strand, within AZOBR_RS04145 at 870.545 kb on + strand, within AZOBR_RS04145 at 870.545 kb on + strand, within AZOBR_RS04145 at 870.545 kb on + strand, within AZOBR_RS04145 at 870.546 kb on - strand, within AZOBR_RS04145 at 870.546 kb on - strand, within AZOBR_RS04145 at 870.546 kb on - strand, within AZOBR_RS04145
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 867,372 + AZOBR_RS04135 0.25 +0.4 867,372 + AZOBR_RS04135 0.25 -2.0 867,373 - AZOBR_RS04135 0.25 -0.2 867,373 - AZOBR_RS04135 0.25 +0.2 867,597 + AZOBR_RS04135 0.48 +0.1 867,597 + AZOBR_RS04135 0.48 -0.7 867,598 - AZOBR_RS04135 0.48 +0.8 867,600 + AZOBR_RS04135 0.48 +0.0 867,600 + AZOBR_RS04135 0.48 -0.3 867,600 + AZOBR_RS04135 0.48 -0.8 867,600 + AZOBR_RS04135 0.48 -0.2 867,600 + AZOBR_RS04135 0.48 -0.2 867,600 + AZOBR_RS04135 0.48 +0.6 867,600 + AZOBR_RS04135 0.48 +0.7 867,600 + AZOBR_RS04135 0.48 +0.1 867,600 + AZOBR_RS04135 0.48 +0.1 867,601 - AZOBR_RS04135 0.48 -0.0 867,601 - AZOBR_RS04135 0.48 -0.3 867,906 + AZOBR_RS04135 0.79 +0.2 868,026 + -0.0 868,027 - +0.9 868,027 - -0.1 868,177 + +0.1 868,178 - +0.2 868,178 - +0.2 868,178 - +0.2 868,399 + +0.6 868,400 - +0.1 868,400 - -0.7 868,459 + AZOBR_RS04140 0.14 -0.2 868,672 + AZOBR_RS04140 0.30 +0.1 868,673 - AZOBR_RS04140 0.31 +0.2 868,756 + AZOBR_RS04140 0.37 -0.1 868,756 + AZOBR_RS04140 0.37 -0.4 868,756 + AZOBR_RS04140 0.37 +0.0 868,756 + AZOBR_RS04140 0.37 +1.0 868,757 - AZOBR_RS04140 0.37 +0.6 868,757 - AZOBR_RS04140 0.37 +1.3 868,757 - AZOBR_RS04140 0.37 +0.3 868,834 + AZOBR_RS04140 0.43 +0.4 868,835 - AZOBR_RS04140 0.43 +0.9 868,835 - AZOBR_RS04140 0.43 +0.6 868,847 - AZOBR_RS04140 0.44 +0.8 868,936 + AZOBR_RS04140 0.51 +0.7 868,969 + AZOBR_RS04140 0.53 +1.3 868,970 - AZOBR_RS04140 0.54 +0.1 869,353 + AZOBR_RS04140 0.83 +0.5 869,353 + AZOBR_RS04140 0.83 -0.0 869,353 + AZOBR_RS04140 0.83 -0.1 869,353 + AZOBR_RS04140 0.83 +0.8 869,353 + AZOBR_RS04140 0.83 +0.2 869,353 + AZOBR_RS04140 0.83 +0.4 869,353 + AZOBR_RS04140 0.83 -0.6 869,354 - AZOBR_RS04140 0.83 +0.4 869,423 - AZOBR_RS04140 0.89 +0.0 869,423 - AZOBR_RS04140 0.89 -0.3 869,423 - AZOBR_RS04140 0.89 +1.5 869,760 + +0.4 869,760 + +0.5 869,761 - -0.2 869,784 - -0.3 869,826 + +0.5 869,826 + +0.6 869,826 + +1.2 869,826 + +0.1 869,827 - +0.8 869,847 - -0.2 869,862 - +0.3 869,975 + +0.3 869,976 - -0.6 869,976 - -0.2 869,976 - +0.1 870,036 - AZOBR_RS04145 0.14 +0.5 870,155 + AZOBR_RS04145 0.24 +0.2 870,155 + AZOBR_RS04145 0.24 -0.7 870,155 + AZOBR_RS04145 0.24 +0.4 870,155 + AZOBR_RS04145 0.24 -0.2 870,155 + AZOBR_RS04145 0.24 -0.1 870,155 + AZOBR_RS04145 0.24 +0.4 870,156 - AZOBR_RS04145 0.24 +0.3 870,156 - AZOBR_RS04145 0.24 -0.2 870,156 - AZOBR_RS04145 0.24 +1.8 870,302 + AZOBR_RS04145 0.35 -0.2 870,332 + AZOBR_RS04145 0.38 -0.3 870,332 + AZOBR_RS04145 0.38 +2.4 870,332 + AZOBR_RS04145 0.38 -0.2 870,332 + AZOBR_RS04145 0.38 -0.2 870,333 - AZOBR_RS04145 0.38 +0.3 870,333 - AZOBR_RS04145 0.38 -0.6 870,333 - AZOBR_RS04145 0.38 +1.3 870,411 - AZOBR_RS04145 0.44 +0.4 870,422 + AZOBR_RS04145 0.45 -1.1 870,422 + AZOBR_RS04145 0.45 -0.0 870,423 - AZOBR_RS04145 0.45 +0.7 870,458 + AZOBR_RS04145 0.48 -0.3 870,545 + AZOBR_RS04145 0.55 -0.1 870,545 + AZOBR_RS04145 0.55 -0.1 870,545 + AZOBR_RS04145 0.55 -2.0 870,546 - AZOBR_RS04145 0.55 -0.5 870,546 - AZOBR_RS04145 0.55 +0.6 870,546 - AZOBR_RS04145 0.55 -0.7
Or see this region's nucleotide sequence