Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01640 and AZOBR_RS01645 overlap by 29 nucleotides AZOBR_RS01645 and AZOBR_RS01650 are separated by 266 nucleotides
AZOBR_RS01640: AZOBR_RS01640 - hypothetical protein, at 335,607 to 336,788
_RS01640
AZOBR_RS01645: AZOBR_RS01645 - ABC transporter, at 336,760 to 338,376
_RS01645
AZOBR_RS01650: AZOBR_RS01650 - ATP-dependent protease, at 338,643 to 339,980
_RS01650
Position (kb) 336
337
338
339 Strain fitness (log2 ratio) -1
0
1 at 335.856 kb on + strand, within AZOBR_RS01640 at 335.856 kb on + strand, within AZOBR_RS01640 at 335.856 kb on + strand, within AZOBR_RS01640 at 335.857 kb on - strand, within AZOBR_RS01640 at 335.857 kb on - strand, within AZOBR_RS01640 at 335.857 kb on - strand, within AZOBR_RS01640 at 335.868 kb on + strand, within AZOBR_RS01640 at 335.869 kb on - strand, within AZOBR_RS01640 at 336.201 kb on + strand, within AZOBR_RS01640 at 336.201 kb on + strand, within AZOBR_RS01640 at 336.201 kb on + strand, within AZOBR_RS01640 at 336.201 kb on + strand, within AZOBR_RS01640 at 336.201 kb on + strand, within AZOBR_RS01640 at 336.201 kb on + strand, within AZOBR_RS01640 at 336.201 kb on + strand, within AZOBR_RS01640 at 336.202 kb on - strand, within AZOBR_RS01640 at 336.202 kb on - strand, within AZOBR_RS01640 at 336.202 kb on - strand, within AZOBR_RS01640 at 336.202 kb on - strand, within AZOBR_RS01640 at 336.202 kb on - strand, within AZOBR_RS01640 at 336.202 kb on - strand, within AZOBR_RS01640 at 336.202 kb on - strand, within AZOBR_RS01640 at 336.863 kb on + strand at 337.326 kb on - strand, within AZOBR_RS01645 at 338.474 kb on + strand at 338.528 kb on + strand at 338.529 kb on - strand at 338.645 kb on - strand at 338.911 kb on + strand, within AZOBR_RS01650 at 338.911 kb on + strand, within AZOBR_RS01650 at 338.911 kb on + strand, within AZOBR_RS01650 at 338.912 kb on - strand, within AZOBR_RS01650 at 338.912 kb on - strand, within AZOBR_RS01650 at 338.912 kb on - strand, within AZOBR_RS01650 at 338.912 kb on - strand, within AZOBR_RS01650 at 338.912 kb on - strand, within AZOBR_RS01650 at 339.178 kb on + strand, within AZOBR_RS01650 at 339.178 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.313 kb on + strand, within AZOBR_RS01650 at 339.314 kb on - strand, within AZOBR_RS01650 at 339.314 kb on - strand, within AZOBR_RS01650
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 335,856 + AZOBR_RS01640 0.21 +0.6 335,856 + AZOBR_RS01640 0.21 +0.2 335,856 + AZOBR_RS01640 0.21 +0.0 335,857 - AZOBR_RS01640 0.21 -0.2 335,857 - AZOBR_RS01640 0.21 -0.5 335,857 - AZOBR_RS01640 0.21 -1.0 335,868 + AZOBR_RS01640 0.22 -0.5 335,869 - AZOBR_RS01640 0.22 +0.5 336,201 + AZOBR_RS01640 0.50 -0.2 336,201 + AZOBR_RS01640 0.50 -0.5 336,201 + AZOBR_RS01640 0.50 +0.6 336,201 + AZOBR_RS01640 0.50 +0.2 336,201 + AZOBR_RS01640 0.50 -0.4 336,201 + AZOBR_RS01640 0.50 -0.3 336,201 + AZOBR_RS01640 0.50 -0.1 336,202 - AZOBR_RS01640 0.50 +1.4 336,202 - AZOBR_RS01640 0.50 +0.1 336,202 - AZOBR_RS01640 0.50 +1.1 336,202 - AZOBR_RS01640 0.50 -0.4 336,202 - AZOBR_RS01640 0.50 +0.3 336,202 - AZOBR_RS01640 0.50 +0.4 336,202 - AZOBR_RS01640 0.50 +0.7 336,863 + -0.2 337,326 - AZOBR_RS01645 0.35 -0.7 338,474 + -0.9 338,528 + +0.3 338,529 - -0.3 338,645 - +0.3 338,911 + AZOBR_RS01650 0.20 +1.0 338,911 + AZOBR_RS01650 0.20 -0.6 338,911 + AZOBR_RS01650 0.20 -0.1 338,912 - AZOBR_RS01650 0.20 +0.1 338,912 - AZOBR_RS01650 0.20 +0.8 338,912 - AZOBR_RS01650 0.20 -1.1 338,912 - AZOBR_RS01650 0.20 -0.5 338,912 - AZOBR_RS01650 0.20 +0.0 339,178 + AZOBR_RS01650 0.40 +0.1 339,178 + AZOBR_RS01650 0.40 +0.1 339,313 + AZOBR_RS01650 0.50 -0.7 339,313 + AZOBR_RS01650 0.50 +0.1 339,313 + AZOBR_RS01650 0.50 -1.1 339,313 + AZOBR_RS01650 0.50 -0.7 339,314 - AZOBR_RS01650 0.50 +0.6 339,314 - AZOBR_RS01650 0.50 +0.0
Or see this region's nucleotide sequence