Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00230 and AZOBR_RS00235 are separated by 127 nucleotides AZOBR_RS00235 and AZOBR_RS00240 are separated by 132 nucleotides AZOBR_RS00240 and AZOBR_RS00245 are separated by 206 nucleotides
AZOBR_RS00230: AZOBR_RS00230 - hypothetical protein, at 39,392 to 41,044
_RS00230
AZOBR_RS00235: AZOBR_RS00235 - MFS transporter, at 41,172 to 42,488
_RS00235
AZOBR_RS00240: AZOBR_RS00240 - hypothetical protein, at 42,621 to 43,124
_RS00240
AZOBR_RS00245: AZOBR_RS00245 - exopolyphosphatase, at 43,331 to 44,263
_RS00245
Position (kb) 41
42
43 Strain fitness (log2 ratio) -1
0
1 at 41.253 kb on + strand at 41.254 kb on - strand at 41.254 kb on - strand at 41.254 kb on - strand at 41.416 kb on + strand, within AZOBR_RS00235 at 41.417 kb on - strand, within AZOBR_RS00235 at 41.417 kb on - strand, within AZOBR_RS00235 at 41.765 kb on - strand, within AZOBR_RS00235 at 42.142 kb on + strand, within AZOBR_RS00235 at 42.142 kb on + strand, within AZOBR_RS00235 at 42.142 kb on + strand, within AZOBR_RS00235 at 42.142 kb on + strand, within AZOBR_RS00235 at 42.143 kb on - strand, within AZOBR_RS00235 at 42.500 kb on + strand at 42.500 kb on + strand at 42.501 kb on - strand at 42.974 kb on + strand, within AZOBR_RS00240
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 41,253 + +0.2 41,254 - +0.4 41,254 - +1.0 41,254 - +0.8 41,416 + AZOBR_RS00235 0.19 +0.2 41,417 - AZOBR_RS00235 0.19 +0.8 41,417 - AZOBR_RS00235 0.19 +0.5 41,765 - AZOBR_RS00235 0.45 +0.3 42,142 + AZOBR_RS00235 0.74 +0.1 42,142 + AZOBR_RS00235 0.74 +1.0 42,142 + AZOBR_RS00235 0.74 -0.9 42,142 + AZOBR_RS00235 0.74 -0.2 42,143 - AZOBR_RS00235 0.74 +0.2 42,500 + -0.2 42,500 + -0.7 42,501 - -0.2 42,974 + AZOBR_RS00240 0.70 -1.1
Or see this region's nucleotide sequence