Experiment: nitrate 300 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_3750 and mraW are separated by 12 nucleotides mraW and Shewana3_3752 are separated by 30 nucleotides Shewana3_3752 and Shewana3_3753 are separated by 517 nucleotides
Shewana3_3750: Shewana3_3750 - cell division protein FtsL (RefSeq), at 4,508,684 to 4,508,998
_3750
Shewana3_3751: mraW - S-adenosyl-methyltransferase MraW (RefSeq), at 4,509,011 to 4,509,952
mraW
Shewana3_3752: Shewana3_3752 - cell division protein MraZ (RefSeq), at 4,509,983 to 4,510,441
_3752
Shewana3_3753: Shewana3_3753 - hypothetical protein (RefSeq), at 4,510,959 to 4,511,663
_3753
Position (kb) 4509
4510
4511 Strain fitness (log2 ratio) -1
0
1 at 4510.088 kb on - strand, within Shewana3_3752 at 4510.595 kb on - strand at 4510.817 kb on + strand at 4511.003 kb on + strand at 4511.061 kb on + strand, within Shewana3_3753 at 4511.141 kb on - strand, within Shewana3_3753 at 4511.151 kb on - strand, within Shewana3_3753 at 4511.297 kb on + strand, within Shewana3_3753 at 4511.361 kb on - strand, within Shewana3_3753
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 300 mM remove 4,510,088 - Shewana3_3752 0.23 -1.0 4,510,595 - -0.3 4,510,817 + -0.8 4,511,003 + -0.6 4,511,061 + Shewana3_3753 0.14 +0.2 4,511,141 - Shewana3_3753 0.26 -0.6 4,511,151 - Shewana3_3753 0.27 -0.3 4,511,297 + Shewana3_3753 0.48 +0.3 4,511,361 - Shewana3_3753 0.57 -0.3
Or see this region's nucleotide sequence