Strain Fitness in Shewanella loihica PV-4 around Shew_1468

Experiment: Chlorite 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chlorite 200 mM
1,691,908	+				+0.2
1,691,908	+				+0.3
1,691,915	-				-0.1
1,691,947	+				+0.2
1,691,958	+				+0.7
1,692,201	+				-0.4
1,692,277	-				+0.3
1,692,277	-				+0.1
1,692,334	-				+0.9
1,692,338	+				+0.1
1,692,341	-				-0.5
1,692,343	+				+0.2
1,692,349	+				+0.6
1,692,362	+				+0.2
1,692,362	+				+0.5
1,692,362	+				+1.0
1,692,384	+				-0.8
1,692,485	-				-0.5
1,692,513	+				+0.4
1,692,513	+				+0.8
1,692,515	-				+1.1
1,692,521	-				+0.7
1,692,521	-				+0.5
1,692,521	-				+0.1
1,692,572	-				+0.0
1,692,620	+				-0.4
1,692,620	+				-0.3
1,692,620	+				+2.0
1,692,620	+				-0.2
1,692,637	+				+0.6
1,692,642	+				+0.9
1,692,642	+				+0.7
1,692,642	+				-0.3
1,692,642	+				+0.1
1,692,650	-				+0.2
1,692,650	-				-0.2
1,692,650	-				-0.6
1,692,769	+		Shew_1468	0.18	-0.6
1,692,801	+		Shew_1468	0.23	+0.6
1,692,813	+		Shew_1468	0.25	+0.6
1,692,821	-		Shew_1468	0.27	+0.4
1,692,821	-		Shew_1468	0.27	-1.1
1,692,821	-		Shew_1468	0.27	+0.6
1,692,821	-		Shew_1468	0.27	-0.4
1,692,821	-		Shew_1468	0.27	-0.4
1,692,846	+		Shew_1468	0.31	-0.9
1,692,853	-		Shew_1468	0.32	+0.2
1,692,857	+		Shew_1468	0.33	+0.7
1,692,911	-		Shew_1468	0.42	+0.3
1,692,922	+		Shew_1468	0.44	+0.3
1,692,927	+		Shew_1468	0.45	+1.2
1,692,989	+		Shew_1468	0.56	+0.4
1,692,991	+		Shew_1468	0.56	+0.1
1,692,996	+		Shew_1468	0.57	+1.7
1,693,002	+		Shew_1468	0.58	+0.2
1,693,006	+		Shew_1468	0.58	-0.2
1,693,040	+		Shew_1468	0.64	-0.4
1,693,040	+		Shew_1468	0.64	+0.4
1,693,054	+		Shew_1468	0.67	+0.5
1,693,059	+		Shew_1468	0.68	-0.1
1,693,059	+		Shew_1468	0.68	+2.0
1,693,059	+		Shew_1468	0.68	+0.3
1,693,059	+		Shew_1468	0.68	+0.6
1,693,059	+		Shew_1468	0.68	-0.0
1,693,059	+		Shew_1468	0.68	+0.9
1,693,059	+		Shew_1468	0.68	+0.7
1,693,060	-		Shew_1468	0.68	-0.5
1,693,060	-		Shew_1468	0.68	+1.1
1,693,060	-		Shew_1468	0.68	+0.9
1,693,067	-		Shew_1468	0.69	+0.4
1,693,067	-		Shew_1468	0.69	-0.3
1,693,067	-		Shew_1468	0.69	+0.1
1,693,067	-		Shew_1468	0.69	+0.2
1,693,074	+		Shew_1468	0.70	+0.9
1,693,074	+		Shew_1468	0.70	-3.3
1,693,074	+		Shew_1468	0.70	+1.2
1,693,082	-		Shew_1468	0.71	+0.3
1,693,084	+		Shew_1468	0.72	+0.0
1,693,146	+		Shew_1468	0.82	+0.4
1,693,154	-		Shew_1468	0.84	-0.2
1,693,198	-				+1.0
1,693,225	-				-1.9
1,693,241	+				+0.6
1,693,249	+				+0.1
1,693,249	+				-0.8
1,693,257	-				+0.6
1,693,264	+				-0.2
1,693,274	+				-0.4
1,693,279	-				+1.0
1,693,279	-				-0.4
1,693,281	+				-0.1
1,693,283	+				-0.1
1,693,283	+				+0.2
1,693,283	+				+0.9
1,693,283	+				+0.3
1,693,283	+				+0.2
1,693,283	+				+0.1
1,693,283	+				+0.3
1,693,289	-				-0.2
1,693,291	-				+1.2
1,693,291	+				+0.5
1,693,292	+				+0.1
1,693,292	+				+0.1
1,693,300	+				+0.0
1,693,330	-				+0.2
1,693,330	-				-1.2
1,693,347	-				-1.2
1,693,421	+				+0.6
1,693,421	+				+0.9
1,693,421	+				-0.2
1,693,421	+				-1.2
1,693,421	+				+0.4
1,693,421	+				-0.1
1,693,421	+				-0.9
1,693,421	+				-0.1
1,693,429	-				-0.3
1,693,429	-				+0.9
1,693,429	-				-1.6
1,693,429	-				+0.1
1,693,429	-				+0.7
1,693,429	-				-2.8
1,693,429	-				+2.3
1,693,429	-				+1.2
1,693,452	+				+0.6
1,693,475	-				-0.3
1,693,477	+				+1.4
1,693,485	-		Shew_1469	0.10	-0.6
1,693,495	-		Shew_1469	0.11	+0.3
1,693,495	-		Shew_1469	0.11	-0.6
1,693,525	+		Shew_1469	0.13	+0.4
1,693,533	-		Shew_1469	0.13	-0.1
1,693,541	+		Shew_1469	0.14	-0.9
1,693,546	+		Shew_1469	0.14	+0.3
1,693,546	+		Shew_1469	0.14	-0.1
1,693,546	+		Shew_1469	0.14	+1.0
1,693,546	+		Shew_1469	0.14	+0.1
1,693,549	-		Shew_1469	0.14	-0.6
1,693,549	-		Shew_1469	0.14	-0.3
1,693,549	-		Shew_1469	0.14	+0.9
1,693,549	-		Shew_1469	0.14	-0.8
1,693,554	+		Shew_1469	0.15	-0.1
1,693,554	-		Shew_1469	0.15	-0.2
1,693,562	+		Shew_1469	0.15	-0.6
1,693,569	-		Shew_1469	0.15	+1.0
1,693,586	+		Shew_1469	0.16	+0.9
1,693,593	+		Shew_1469	0.17	+0.0
1,693,594	-		Shew_1469	0.17	-0.1
1,693,599	-		Shew_1469	0.17	+0.4
1,693,601	-		Shew_1469	0.17	+0.8
1,693,608	-		Shew_1469	0.18	-0.1
1,693,647	+		Shew_1469	0.20	+0.3
1,693,676	+		Shew_1469	0.22	-0.3
1,693,676	+		Shew_1469	0.22	+0.6
1,693,681	+		Shew_1469	0.22	-2.8
1,693,681	+		Shew_1469	0.22	-0.0
1,693,684	-		Shew_1469	0.22	+0.1
1,693,689	-		Shew_1469	0.23	-0.3
1,693,691	+		Shew_1469	0.23	+0.7
1,693,705	+		Shew_1469	0.24	-0.2
1,693,724	-		Shew_1469	0.25	-0.0
1,693,778	+		Shew_1469	0.28	-0.2
1,693,819	+		Shew_1469	0.31	+0.2
1,693,819	+		Shew_1469	0.31	+0.2
1,693,819	+		Shew_1469	0.31	+0.5
1,693,827	-		Shew_1469	0.31	+2.1
1,693,827	-		Shew_1469	0.31	+0.5
1,693,828	-		Shew_1469	0.31	-0.5
1,693,832	+		Shew_1469	0.32	-0.3
1,693,832	+		Shew_1469	0.32	+0.0
1,693,832	+		Shew_1469	0.32	-0.5
1,693,840	-		Shew_1469	0.32	+1.6
1,693,840	-		Shew_1469	0.32	+1.7
1,693,840	-		Shew_1469	0.32	+0.8
1,693,840	-		Shew_1469	0.32	-2.2
1,693,854	+		Shew_1469	0.33	+0.7
1,693,854	+		Shew_1469	0.33	+0.4
1,693,862	-		Shew_1469	0.33	-1.9
1,693,894	+		Shew_1469	0.35	-0.1
1,693,894	+		Shew_1469	0.35	+0.3
1,693,894	+		Shew_1469	0.35	+1.2
1,693,934	-		Shew_1469	0.38	-0.4
1,693,941	+		Shew_1469	0.38	-0.5
1,693,945	+		Shew_1469	0.38	-0.5
1,693,957	-		Shew_1469	0.39	+0.7
1,694,022	-		Shew_1469	0.43	+1.0
1,694,069	+		Shew_1469	0.46	+1.7
1,694,076	+		Shew_1469	0.47	-0.0
1,694,076	+		Shew_1469	0.47	+0.6
1,694,117	+		Shew_1469	0.49	-0.1
1,694,132	-		Shew_1469	0.50	+0.4
1,694,139	+		Shew_1469	0.50	+0.9
1,694,147	-		Shew_1469	0.51	-0.8
1,694,205	+		Shew_1469	0.54	-0.7
1,694,221	+		Shew_1469	0.55	+0.3
1,694,221	+		Shew_1469	0.55	+0.4
1,694,221	+		Shew_1469	0.55	-1.6
1,694,224	-		Shew_1469	0.56	+0.7
1,694,226	+		Shew_1469	0.56	-0.1
1,694,231	+		Shew_1469	0.56	+0.4
1,694,231	+		Shew_1469	0.56	-0.4
1,694,239	-		Shew_1469	0.56	+0.4
1,694,239	-		Shew_1469	0.56	-0.5
1,694,239	-		Shew_1469	0.56	-1.8
1,694,239	-		Shew_1469	0.56	+0.5
1,694,241	+		Shew_1469	0.57	-1.2
1,694,241	+		Shew_1469	0.57	+0.6
1,694,241	+		Shew_1469	0.57	+0.7