Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_896

Experiment: A22 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.002 mg/ml
1,048,190	+				+0.4
1,048,191	-				+1.3
1,048,191	-				-0.5
1,048,191	-				-0.4
1,048,293	+				-0.4
1,048,293	+				+1.1
1,048,293	+				+0.6
1,048,293	+				-0.2
1,048,293	+				+0.7
1,048,293	+				+0.3
1,048,293	+				-0.0
1,048,294	-				-0.0
1,048,294	-				+0.9
1,048,294	-				+0.9
1,048,295	+				-0.5
1,048,295	+				+0.6
1,048,295	+				+0.7
1,048,295	+				-1.0
1,048,295	+				+1.9
1,048,295	+				+1.0
1,048,295	+				+0.3
1,048,295	+				-0.5
1,048,295	+				-0.2
1,048,296	-				+0.1
1,048,296	-				+0.5
1,048,296	-				+0.1
1,048,296	-				+0.1
1,048,296	-				+0.7
1,048,296	-				-0.1
1,048,297	+				+0.8
1,048,297	+				+0.4
1,048,297	+				-2.5
1,048,297	+				+0.3
1,048,297	+				-0.5
1,048,297	+				+0.1
1,048,297	+				+0.8
1,048,297	+				-0.4
1,048,297	+				-0.9
1,048,297	+				-0.1
1,048,297	+				+0.4
1,048,297	+				-0.3
1,048,297	+				-1.3
1,048,297	+				-0.3
1,048,297	+				-1.1
1,048,297	+				-2.3
1,048,297	+				+0.6
1,048,297	+				-0.2
1,048,297	+				+0.2
1,048,297	+				-0.5
1,048,297	+				-0.7
1,048,297	+				+0.6
1,048,297	+				-0.1
1,048,298	-				+3.2
1,048,298	-				-0.1
1,048,298	-				+1.9
1,048,298	-				-0.1
1,048,298	-				-0.7
1,048,298	-				-0.5
1,048,298	-				+0.7
1,048,298	-				-0.0
1,048,298	-				-0.0
1,048,298	-				-0.5
1,048,298	-				+0.6
1,048,301	+				+1.0
1,048,301	+				+0.2
1,048,301	+				+0.0
1,048,301	+				-0.9
1,048,301	+				+0.4
1,048,301	+				-0.5
1,048,302	-				+0.6
1,048,302	-				+0.1
1,048,302	-				+0.6
1,048,302	-				-1.2
1,048,302	-				+1.2
1,048,302	-				+0.2
1,048,305	+				-1.2
1,048,305	+				+0.9
1,048,305	+				+0.2
1,048,306	-				-0.6
1,048,306	-				+0.3
1,048,306	-				-0.0
1,048,306	-				-0.7
1,048,306	-				+1.1
1,048,313	+				+0.7
1,048,313	+				-0.2
1,048,314	-				+0.2
1,048,375	+				-0.9
1,048,376	-				+1.8
1,048,482	+				-1.5
1,048,482	+				+0.6
1,048,482	+				+2.0
1,048,485	+				+0.5
1,048,528	+				+0.6
1,048,529	-				+0.9
1,048,529	-				+0.4
1,048,529	-				-0.4
1,048,529	-				-0.2
1,048,645	-		Pf6N2E2_895	0.23	-0.3
1,048,768	+		Pf6N2E2_895	0.48	+0.5
1,048,768	+		Pf6N2E2_895	0.48	-2.8
1,048,795	+		Pf6N2E2_895	0.54	-2.1
1,048,795	+		Pf6N2E2_895	0.54	-0.1
1,048,795	+		Pf6N2E2_895	0.54	-0.9
1,048,818	+		Pf6N2E2_895	0.59	+0.3
1,048,818	+		Pf6N2E2_895	0.59	-0.2
1,048,819	-		Pf6N2E2_895	0.59	-0.3
1,048,930	+		Pf6N2E2_895	0.82	-0.2
1,048,930	+		Pf6N2E2_895	0.82	+0.8
1,048,930	+		Pf6N2E2_895	0.82	+2.8
1,048,930	+		Pf6N2E2_895	0.82	+1.0
1,048,935	+		Pf6N2E2_895	0.83	-0.3
1,049,013	-				+1.2
1,049,016	+				-0.2
1,049,016	+				-0.1
1,049,016	+				+0.7
1,049,016	+				+0.5
1,049,016	+				+1.3
1,049,016	+				+0.5
1,049,016	+				+0.4
1,049,017	-				+0.2
1,049,017	-				+0.9
1,049,017	-				-0.7
1,049,017	-				+0.6
1,049,017	-				+0.8
1,049,017	-				-1.0
1,049,063	-				-0.6
1,049,076	+				+0.0
1,049,077	-				-0.4
1,049,161	+				+2.8
1,049,161	+				-0.5
1,049,162	-				+0.5
1,049,227	-				-1.4
1,049,358	+		Pf6N2E2_896	0.22	-1.3
1,049,467	+		Pf6N2E2_896	0.33	-1.7
1,049,689	+		Pf6N2E2_896	0.58	-0.7
1,049,690	-		Pf6N2E2_896	0.58	-0.1
1,049,744	+		Pf6N2E2_896	0.64	+0.6
1,049,744	+		Pf6N2E2_896	0.64	-0.5
1,049,786	-		Pf6N2E2_896	0.68	-1.0
1,049,848	-		Pf6N2E2_896	0.75	+0.4
1,050,052	-				-1.7
1,050,077	+				-0.7
1,050,077	+				-0.1
1,050,077	+				+0.5
1,050,077	+				-0.6
1,050,077	+				+0.3
1,050,077	+				+0.3
1,050,077	+				+0.1
1,050,077	+				+0.2
1,050,077	+				+1.6
1,050,078	-				-0.5
1,050,078	-				-0.5
1,050,078	-				+0.1
1,050,078	-				-2.1
1,050,078	-				+0.5
1,050,078	-				-0.2
1,050,078	-				+0.8
1,050,078	-				+0.7
1,050,078	-				+0.8
1,050,078	-				-0.2
1,050,080	+				+0.9
1,050,080	+				+0.9
1,050,080	+				+1.0
1,050,081	-				-0.2
1,050,081	-				-0.9
1,050,081	-				+1.0
1,050,081	-				-0.3
1,050,081	-				-1.4
1,050,088	+				-0.5
1,050,089	-				-0.2
1,050,089	-				+0.3
1,050,135	+				+1.1
1,050,366	+		Pf6N2E2_897	0.35	+0.4
1,050,442	+		Pf6N2E2_897	0.46	+0.8
1,050,442	+		Pf6N2E2_897	0.46	+0.2
1,050,442	+		Pf6N2E2_897	0.46	+1.7
1,050,443	-		Pf6N2E2_897	0.46	+0.1
1,050,443	-		Pf6N2E2_897	0.46	+0.2
1,050,443	-		Pf6N2E2_897	0.46	-0.3
1,050,469	+		Pf6N2E2_897	0.49	+0.0
1,050,619	+		Pf6N2E2_897	0.69	+0.1
1,050,620	-		Pf6N2E2_897	0.69	-0.0
1,050,620	-		Pf6N2E2_897	0.69	+3.4
1,050,620	-		Pf6N2E2_897	0.69	+0.7
1,050,766	+		Pf6N2E2_897	0.89	-0.4
1,050,946	+				-0.7
1,050,947	-				+0.4