Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4073

Experiment: A22 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.002 mg/ml
4,747,445	-				+1.0
4,747,456	-				+0.1
4,747,456	-				+0.6
4,747,588	+		Pf6N2E2_4072	0.12	-2.0
4,747,588	+		Pf6N2E2_4072	0.12	+0.6
4,747,589	-		Pf6N2E2_4072	0.12	-2.6
4,747,589	-		Pf6N2E2_4072	0.12	-2.6
4,747,589	-		Pf6N2E2_4072	0.12	-1.9
4,747,589	-		Pf6N2E2_4072	0.12	-2.0
4,747,589	-		Pf6N2E2_4072	0.12	-0.4
4,747,675	+		Pf6N2E2_4072	0.22	+0.3
4,747,675	+		Pf6N2E2_4072	0.22	-2.7
4,747,676	-		Pf6N2E2_4072	0.22	-0.4
4,747,676	-		Pf6N2E2_4072	0.22	-0.4
4,747,927	+		Pf6N2E2_4072	0.52	-2.2
4,747,927	+		Pf6N2E2_4072	0.52	-0.4
4,748,185	+		Pf6N2E2_4072	0.83	-1.4
4,748,206	+		Pf6N2E2_4072	0.86	-1.7
4,748,206	+		Pf6N2E2_4072	0.86	-1.7
4,748,207	-		Pf6N2E2_4072	0.86	-1.6
4,748,306	+				-3.1
4,748,307	-				-1.2
4,748,307	-				-1.9
4,748,307	-				-1.5
4,748,342	-				-0.3
4,748,342	-				+0.7
4,748,355	+				-1.6
4,748,355	+				-1.6
4,748,356	-				+1.4
4,748,392	-				-0.6
4,748,392	-				-0.5
4,748,392	-				+1.2
4,748,392	-				+0.4
4,748,392	-				+0.6
4,748,419	+				-1.6
4,748,419	+				-1.1
4,748,419	+				-1.3
4,748,420	-				+3.2
4,748,420	-				-0.4
4,748,420	-				+1.0
4,748,423	+				-1.7
4,748,423	+				-0.0
4,748,424	-				+0.5
4,748,437	+				-3.1
4,748,438	-				+0.6
4,748,438	-				+0.7
4,748,438	-				+0.5
4,748,438	-				-0.4
4,748,522	-				-0.1
4,748,522	-				+0.9
4,748,572	+				-1.9
4,748,572	+				-3.3
4,748,572	+				-1.7
4,748,572	+				+0.2
4,748,572	+				-0.8
4,748,573	-				+0.2
4,748,573	-				-0.0
4,748,573	-				+0.1
4,748,573	-				-0.1
4,748,573	-				+2.3
4,748,573	-				+0.8
4,748,573	-				+0.1
4,748,573	-				+0.3
4,748,573	-				-1.9
4,748,573	-				+0.5
4,748,577	-				+1.0
4,748,577	-				+0.0
4,748,577	-				+1.4
4,748,577	-				+0.3
4,748,577	-				+0.9
4,748,577	-				+0.8
4,748,618	-		Pf6N2E2_4073	0.12	+0.1
4,748,618	-		Pf6N2E2_4073	0.12	+0.0
4,748,624	-		Pf6N2E2_4073	0.12	-0.6
4,748,624	-		Pf6N2E2_4073	0.12	+0.4
4,748,667	+		Pf6N2E2_4073	0.15	-2.4
4,748,668	-		Pf6N2E2_4073	0.15	-0.5
4,748,977	+		Pf6N2E2_4073	0.33	-1.7
4,748,978	-		Pf6N2E2_4073	0.34	-0.7
4,748,978	-		Pf6N2E2_4073	0.34	-0.1
4,748,978	-		Pf6N2E2_4073	0.34	-3.4
4,749,008	-		Pf6N2E2_4073	0.35	-1.6
4,749,008	-		Pf6N2E2_4073	0.35	+1.0
4,749,095	-		Pf6N2E2_4073	0.41	+0.8
4,749,241	+		Pf6N2E2_4073	0.49	+0.9
4,749,242	-		Pf6N2E2_4073	0.49	-1.9
4,749,242	-		Pf6N2E2_4073	0.49	+0.8
4,749,283	+		Pf6N2E2_4073	0.52	-3.7
4,749,404	-		Pf6N2E2_4073	0.59	+0.9
4,749,582	+		Pf6N2E2_4073	0.70	-0.7
4,749,658	+		Pf6N2E2_4073	0.74	-0.8
4,749,665	-		Pf6N2E2_4073	0.75	-1.4
4,749,922	+				-2.1
4,749,923	-				-1.7
4,749,923	-				-2.1
4,749,923	-				-2.0
4,750,096	+				-2.6
4,750,096	+				-1.0
4,750,097	-				-1.5
4,750,097	-				-0.2
4,750,097	-				-0.1
4,750,097	-				-1.6
4,750,097	-				-2.5
4,750,097	-				-1.3
4,750,105	+				-2.9
4,750,106	-				+1.8
4,750,106	-				-0.0
4,750,118	-				+0.7
4,750,507	+		Pf6N2E2_4074	0.18	+3.2
4,750,507	+		Pf6N2E2_4074	0.18	-1.9
4,750,507	+		Pf6N2E2_4074	0.18	-2.3
4,750,508	-		Pf6N2E2_4074	0.18	-1.0
4,750,508	-				+0.6
4,750,508	-		Pf6N2E2_4074	0.18	-2.2
4,750,508	-		Pf6N2E2_4074	0.18	-3.6
4,750,508	-		Pf6N2E2_4074	0.18	-1.8
4,750,508	-		Pf6N2E2_4074	0.18	-1.0
4,750,508	-		Pf6N2E2_4074	0.18	-2.8
4,750,508	-		Pf6N2E2_4074	0.18	-2.9
4,750,636	+		Pf6N2E2_4074	0.23	-1.2
4,750,636	+		Pf6N2E2_4074	0.23	-1.6
4,750,648	+		Pf6N2E2_4074	0.24	-0.5
4,750,648	+		Pf6N2E2_4074	0.24	+0.3
4,750,649	-		Pf6N2E2_4074	0.24	-0.0
4,750,649	-		Pf6N2E2_4074	0.24	-1.4
4,750,649	-		Pf6N2E2_4074	0.24	-2.1
4,750,649	-				-0.4
4,750,649	-		Pf6N2E2_4074	0.24	-2.6
4,750,649	-		Pf6N2E2_4074	0.24	-1.9
4,750,649	-		Pf6N2E2_4074	0.24	-2.2
4,750,933	+		Pf6N2E2_4074	0.36	-0.4
4,750,934	-		Pf6N2E2_4074	0.36	-3.9
4,750,942	+		Pf6N2E2_4074	0.37	-2.9
4,750,942	+		Pf6N2E2_4074	0.37	-1.2
4,750,943	-		Pf6N2E2_4074	0.37	-0.9
4,750,943	-		Pf6N2E2_4074	0.37	-0.9
4,750,987	+		Pf6N2E2_4074	0.39	-2.4
4,750,988	-		Pf6N2E2_4074	0.39	-1.7
4,750,988	-		Pf6N2E2_4074	0.39	-1.2
4,751,077	+		Pf6N2E2_4074	0.42	-2.1
4,751,077	+		Pf6N2E2_4074	0.42	-2.0
4,751,077	+		Pf6N2E2_4074	0.42	-1.7
4,751,077	+		Pf6N2E2_4074	0.42	-2.3
4,751,077	+		Pf6N2E2_4074	0.42	-1.1
4,751,078	-		Pf6N2E2_4074	0.42	-2.4
4,751,078	-		Pf6N2E2_4074	0.42	-1.7
4,751,078	-		Pf6N2E2_4074	0.42	-1.6
4,751,078	-		Pf6N2E2_4074	0.42	-1.0
4,751,078	-		Pf6N2E2_4074	0.42	-3.9
4,751,078	-		Pf6N2E2_4074	0.42	-1.2