Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06426 and H281DRAFT_06427 are separated by 33 nucleotides H281DRAFT_06427 and H281DRAFT_06428 are separated by 614 nucleotides H281DRAFT_06428 and H281DRAFT_06429 are separated by 92 nucleotides
H281DRAFT_06426: H281DRAFT_06426 - ATP-dependent Lon protease, at 26,829 to 29,207
_06426
H281DRAFT_06427: H281DRAFT_06427 - Molecular chaperone IbpA, HSP20 family, at 29,241 to 29,645
_06427
H281DRAFT_06428: H281DRAFT_06428 - hypothetical protein, at 30,260 to 30,385
_06428
H281DRAFT_06429: H281DRAFT_06429 - molybdenum-pterin binding domain-containing protein, at 30,478 to 30,903
_06429
Position (kb) 29
30 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 28.837 kb on - strand, within H281DRAFT_06426 at 28.837 kb on - strand, within H281DRAFT_06426 at 28.912 kb on + strand, within H281DRAFT_06426 at 29.042 kb on + strand at 29.042 kb on + strand at 29.151 kb on + strand at 29.433 kb on + strand, within H281DRAFT_06427 at 29.434 kb on - strand, within H281DRAFT_06427 at 29.434 kb on - strand, within H281DRAFT_06427 at 29.434 kb on - strand, within H281DRAFT_06427 at 29.627 kb on + strand at 29.627 kb on + strand at 29.628 kb on - strand at 29.749 kb on - strand at 29.761 kb on + strand at 29.761 kb on + strand at 29.762 kb on - strand at 29.852 kb on + strand at 30.078 kb on + strand at 30.079 kb on - strand at 30.079 kb on - strand at 30.167 kb on - strand at 30.381 kb on - strand at 30.394 kb on - strand at 30.397 kb on - strand at 30.417 kb on - strand at 30.423 kb on + strand at 30.423 kb on + strand at 30.594 kb on + strand, within H281DRAFT_06429 at 30.604 kb on - strand, within H281DRAFT_06429
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM remove 28,837 - H281DRAFT_06426 0.84 +0.6 28,837 - H281DRAFT_06426 0.84 +0.8 28,912 + H281DRAFT_06426 0.88 +1.2 29,042 + +0.7 29,042 + +0.1 29,151 + -0.8 29,433 + H281DRAFT_06427 0.47 +1.8 29,434 - H281DRAFT_06427 0.48 +0.5 29,434 - H281DRAFT_06427 0.48 +1.6 29,434 - H281DRAFT_06427 0.48 +4.7 29,627 + -2.9 29,627 + +0.3 29,628 - -0.6 29,749 - +0.1 29,761 + -1.5 29,761 + +0.5 29,762 - +0.5 29,852 + +0.0 30,078 + +0.4 30,079 - -0.3 30,079 - -0.3 30,167 - +0.5 30,381 - +0.5 30,394 - -1.3 30,397 - -0.6 30,417 - -0.1 30,423 + -0.0 30,423 + +1.4 30,594 + H281DRAFT_06429 0.27 -0.8 30,604 - H281DRAFT_06429 0.30 -0.0
Or see this region's nucleotide sequence