Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06035 and H281DRAFT_06036 are separated by 300 nucleotides H281DRAFT_06036 and H281DRAFT_06037 are separated by 97 nucleotides H281DRAFT_06037 and H281DRAFT_06038 are separated by 51 nucleotides
H281DRAFT_06035: H281DRAFT_06035 - esterase, PHB depolymerase family, at 39,397 to 40,587
_06035
H281DRAFT_06036: H281DRAFT_06036 - Membrane-associated phospholipid phosphatase, at 40,888 to 41,622
_06036
H281DRAFT_06037: H281DRAFT_06037 - molybdate transport system substrate-binding protein, at 41,720 to 42,526
_06037
H281DRAFT_06038: H281DRAFT_06038 - molybdate transport system permease protein, at 42,578 to 43,252
_06038
Position (kb) 40
41
42 Strain fitness (log2 ratio) -2
-1
0
1
2 at 39.983 kb on + strand, within H281DRAFT_06035 at 39.984 kb on - strand, within H281DRAFT_06035 at 39.984 kb on - strand, within H281DRAFT_06035 at 39.984 kb on - strand, within H281DRAFT_06035 at 40.177 kb on - strand, within H281DRAFT_06035 at 40.265 kb on + strand, within H281DRAFT_06035 at 40.265 kb on + strand, within H281DRAFT_06035 at 40.740 kb on + strand at 40.768 kb on + strand at 40.825 kb on + strand at 40.826 kb on - strand at 40.826 kb on - strand at 40.826 kb on - strand at 40.827 kb on + strand at 40.827 kb on + strand at 40.827 kb on + strand at 40.827 kb on + strand at 40.828 kb on - strand at 40.828 kb on - strand at 40.830 kb on + strand at 40.830 kb on + strand at 40.830 kb on + strand at 40.883 kb on + strand at 40.883 kb on + strand at 40.883 kb on + strand at 40.883 kb on + strand at 40.884 kb on - strand at 40.884 kb on - strand at 40.884 kb on - strand at 40.884 kb on - strand at 40.884 kb on - strand at 40.948 kb on + strand at 40.949 kb on - strand at 41.027 kb on - strand, within H281DRAFT_06036 at 41.120 kb on + strand, within H281DRAFT_06036 at 41.183 kb on - strand, within H281DRAFT_06036 at 41.695 kb on + strand at 41.697 kb on + strand at 41.701 kb on - strand at 41.956 kb on - strand, within H281DRAFT_06037 at 42.170 kb on + strand, within H281DRAFT_06037 at 42.293 kb on + strand, within H281DRAFT_06037 at 42.542 kb on - strand at 42.542 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM remove 39,983 + H281DRAFT_06035 0.49 -0.7 39,984 - H281DRAFT_06035 0.49 -0.2 39,984 - H281DRAFT_06035 0.49 +0.6 39,984 - H281DRAFT_06035 0.49 -0.1 40,177 - H281DRAFT_06035 0.65 -0.8 40,265 + H281DRAFT_06035 0.73 +0.7 40,265 + H281DRAFT_06035 0.73 +2.5 40,740 + -0.8 40,768 + +0.2 40,825 + +0.0 40,826 - -0.0 40,826 - -0.1 40,826 - +0.3 40,827 + +0.9 40,827 + -1.6 40,827 + -1.2 40,827 + +0.2 40,828 - -0.5 40,828 - +0.1 40,830 + +0.7 40,830 + -2.3 40,830 + -0.1 40,883 + -0.8 40,883 + -0.5 40,883 + +1.1 40,883 + +0.4 40,884 - +0.4 40,884 - -1.6 40,884 - -0.3 40,884 - -0.1 40,884 - +0.3 40,948 + +0.5 40,949 - +1.0 41,027 - H281DRAFT_06036 0.19 -0.6 41,120 + H281DRAFT_06036 0.32 -0.2 41,183 - H281DRAFT_06036 0.40 -0.3 41,695 + +0.2 41,697 + +0.4 41,701 - +0.3 41,956 - H281DRAFT_06037 0.29 -1.6 42,170 + H281DRAFT_06037 0.56 -2.7 42,293 + H281DRAFT_06037 0.71 +0.2 42,542 - +0.2 42,542 - -0.5
Or see this region's nucleotide sequence