Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02775 and H281DRAFT_02776 are separated by 38 nucleotides H281DRAFT_02776 and H281DRAFT_02777 are separated by 48 nucleotides
H281DRAFT_02775: H281DRAFT_02775 - Glucose/arabinose dehydrogenase, beta-propeller fold, at 364,308 to 365,678
_02775
H281DRAFT_02776: H281DRAFT_02776 - maltose alpha-D-glucosyltransferase/ alpha-amylase, at 365,717 to 367,381
_02776
H281DRAFT_02777: H281DRAFT_02777 - alpha-glucosidase, at 367,430 to 369,004
_02777
Position (kb) 365
366
367
368 Strain fitness (log2 ratio) -2
-1
0
1
2 at 364.866 kb on + strand, within H281DRAFT_02775 at 364.953 kb on - strand, within H281DRAFT_02775 at 364.973 kb on - strand, within H281DRAFT_02775 at 365.049 kb on + strand, within H281DRAFT_02775 at 365.128 kb on + strand, within H281DRAFT_02775 at 365.128 kb on + strand, within H281DRAFT_02775 at 365.709 kb on - strand at 365.742 kb on + strand at 365.742 kb on + strand at 365.789 kb on + strand at 365.942 kb on - strand, within H281DRAFT_02776 at 365.966 kb on + strand, within H281DRAFT_02776 at 365.967 kb on - strand, within H281DRAFT_02776 at 366.369 kb on + strand, within H281DRAFT_02776 at 366.369 kb on + strand, within H281DRAFT_02776 at 366.556 kb on - strand, within H281DRAFT_02776 at 366.720 kb on + strand, within H281DRAFT_02776 at 367.002 kb on + strand, within H281DRAFT_02776 at 367.002 kb on + strand, within H281DRAFT_02776 at 367.002 kb on + strand, within H281DRAFT_02776 at 367.003 kb on - strand, within H281DRAFT_02776 at 367.155 kb on + strand, within H281DRAFT_02776 at 367.156 kb on - strand, within H281DRAFT_02776 at 367.174 kb on - strand, within H281DRAFT_02776 at 367.467 kb on - strand at 367.592 kb on + strand, within H281DRAFT_02777 at 367.908 kb on - strand, within H281DRAFT_02777 at 368.091 kb on - strand, within H281DRAFT_02777 at 368.132 kb on + strand, within H281DRAFT_02777 at 368.133 kb on - strand, within H281DRAFT_02777
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM remove 364,866 + H281DRAFT_02775 0.41 +0.3 364,953 - H281DRAFT_02775 0.47 -0.5 364,973 - H281DRAFT_02775 0.49 +0.5 365,049 + H281DRAFT_02775 0.54 -0.3 365,128 + H281DRAFT_02775 0.60 -0.1 365,128 + H281DRAFT_02775 0.60 -0.1 365,709 - -0.3 365,742 + -0.0 365,742 + -1.3 365,789 + +1.0 365,942 - H281DRAFT_02776 0.14 -0.2 365,966 + H281DRAFT_02776 0.15 -2.7 365,967 - H281DRAFT_02776 0.15 +0.1 366,369 + H281DRAFT_02776 0.39 -0.2 366,369 + H281DRAFT_02776 0.39 +0.3 366,556 - H281DRAFT_02776 0.50 -0.1 366,720 + H281DRAFT_02776 0.60 +1.0 367,002 + H281DRAFT_02776 0.77 +0.7 367,002 + H281DRAFT_02776 0.77 +0.3 367,002 + H281DRAFT_02776 0.77 -0.9 367,003 - H281DRAFT_02776 0.77 -0.1 367,155 + H281DRAFT_02776 0.86 -0.2 367,156 - H281DRAFT_02776 0.86 +2.3 367,174 - H281DRAFT_02776 0.88 +0.0 367,467 - +0.7 367,592 + H281DRAFT_02777 0.10 +0.6 367,908 - H281DRAFT_02777 0.30 +0.5 368,091 - H281DRAFT_02777 0.42 +1.0 368,132 + H281DRAFT_02777 0.45 -0.1 368,133 - H281DRAFT_02777 0.45 -0.1
Or see this region's nucleotide sequence