Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01497 and H281DRAFT_01498 are separated by 102 nucleotides H281DRAFT_01498 and H281DRAFT_01499 are separated by 103 nucleotides
H281DRAFT_01497: H281DRAFT_01497 - Predicted oxidoreductase, at 367,034 to 367,909
_01497
H281DRAFT_01498: H281DRAFT_01498 - transcriptional regulator, LysR family, at 368,012 to 368,908
_01498
H281DRAFT_01499: H281DRAFT_01499 - hypothetical protein, at 369,012 to 370,241
_01499
Position (kb) 368
369 Strain fitness (log2 ratio) -2
-1
0
1 at 367.023 kb on - strand at 367.073 kb on + strand at 367.280 kb on + strand, within H281DRAFT_01497 at 367.284 kb on + strand, within H281DRAFT_01497 at 367.284 kb on + strand, within H281DRAFT_01497 at 367.284 kb on + strand, within H281DRAFT_01497 at 367.285 kb on - strand, within H281DRAFT_01497 at 367.285 kb on - strand, within H281DRAFT_01497 at 367.285 kb on - strand, within H281DRAFT_01497 at 367.574 kb on + strand, within H281DRAFT_01497 at 367.941 kb on + strand at 368.020 kb on - strand at 368.370 kb on + strand, within H281DRAFT_01498 at 368.370 kb on + strand, within H281DRAFT_01498 at 368.371 kb on - strand, within H281DRAFT_01498 at 368.526 kb on - strand, within H281DRAFT_01498 at 368.734 kb on - strand, within H281DRAFT_01498 at 368.835 kb on - strand at 368.838 kb on - strand at 368.955 kb on + strand at 368.956 kb on - strand at 369.147 kb on + strand, within H281DRAFT_01499 at 369.265 kb on + strand, within H281DRAFT_01499 at 369.266 kb on - strand, within H281DRAFT_01499 at 369.285 kb on + strand, within H281DRAFT_01499 at 369.343 kb on + strand, within H281DRAFT_01499 at 369.343 kb on + strand, within H281DRAFT_01499 at 369.344 kb on - strand, within H281DRAFT_01499 at 369.489 kb on + strand, within H281DRAFT_01499 at 369.489 kb on + strand, within H281DRAFT_01499 at 369.489 kb on + strand, within H281DRAFT_01499 at 369.555 kb on + strand, within H281DRAFT_01499
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM remove 367,023 - -0.4 367,073 + +0.8 367,280 + H281DRAFT_01497 0.28 -0.9 367,284 + H281DRAFT_01497 0.29 -0.4 367,284 + H281DRAFT_01497 0.29 -1.4 367,284 + H281DRAFT_01497 0.29 -0.7 367,285 - H281DRAFT_01497 0.29 -0.7 367,285 - H281DRAFT_01497 0.29 +0.0 367,285 - H281DRAFT_01497 0.29 -1.1 367,574 + H281DRAFT_01497 0.62 -0.5 367,941 + +0.7 368,020 - +0.2 368,370 + H281DRAFT_01498 0.40 +0.3 368,370 + H281DRAFT_01498 0.40 -0.6 368,371 - H281DRAFT_01498 0.40 -0.3 368,526 - H281DRAFT_01498 0.57 -0.3 368,734 - H281DRAFT_01498 0.80 -0.2 368,835 - -0.5 368,838 - +0.1 368,955 + -0.0 368,956 - -1.0 369,147 + H281DRAFT_01499 0.11 +1.6 369,265 + H281DRAFT_01499 0.21 +0.3 369,266 - H281DRAFT_01499 0.21 +0.4 369,285 + H281DRAFT_01499 0.22 +0.8 369,343 + H281DRAFT_01499 0.27 -0.8 369,343 + H281DRAFT_01499 0.27 -0.0 369,344 - H281DRAFT_01499 0.27 -1.8 369,489 + H281DRAFT_01499 0.39 -1.3 369,489 + H281DRAFT_01499 0.39 -0.3 369,489 + H281DRAFT_01499 0.39 -0.1 369,555 + H281DRAFT_01499 0.44 -0.1
Or see this region's nucleotide sequence