Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03375

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
3,548,305	-				-1.0
3,548,358	+				-0.4
3,548,366	-				+0.5
3,548,438	+				-0.7
3,548,443	+				-1.0
3,548,529	-		CCNA_03374	0.30	-0.4
3,548,549	+		CCNA_03374	0.35	-1.9
3,548,549	+		CCNA_03374	0.35	-0.3
3,548,554	+		CCNA_03374	0.36	+0.0
3,548,561	-		CCNA_03374	0.38	-2.0
3,548,574	+		CCNA_03374	0.41	+0.7
3,548,582	-		CCNA_03374	0.43	-1.0
3,548,609	+		CCNA_03374	0.50	+0.1
3,548,617	-		CCNA_03374	0.51	-0.0
3,548,623	+		CCNA_03374	0.53	-0.2
3,548,623	+		CCNA_03374	0.53	-0.0
3,548,623	+		CCNA_03374	0.53	-0.3
3,548,623	+		CCNA_03374	0.53	+0.0
3,548,631	-		CCNA_03374	0.55	-1.1
3,548,631	-		CCNA_03374	0.55	-0.0
3,548,640	+		CCNA_03374	0.57	-0.9
3,548,673	-		CCNA_03374	0.65	+1.0
3,548,674	-		CCNA_03374	0.65	-1.0
3,548,677	+		CCNA_03374	0.66	-1.8
3,548,695	-		CCNA_03374	0.71	-1.7
3,548,701	+		CCNA_03374	0.72	-1.1
3,548,708	-		CCNA_03374	0.74	-0.8
3,548,708	-		CCNA_03374	0.74	-2.0
3,548,708	-		CCNA_03374	0.74	-2.8
3,548,708	-		CCNA_03374	0.74	-1.1
3,548,708	-		CCNA_03374	0.74	-1.7
3,548,708	-		CCNA_03374	0.74	-1.0
3,548,708	-		CCNA_03374	0.74	+1.7
3,548,708	-		CCNA_03374	0.74	+1.0
3,548,759	-		CCNA_03374	0.86	+0.6
3,548,765	-				+1.7
3,548,777	+				+1.5
3,548,787	-				-2.0
3,548,790	-				-2.2
3,548,801	-				-1.0
3,548,803	+				-2.2
3,548,803	+				+0.4
3,548,808	+				+0.6
3,548,812	-				-1.1
3,548,814	+				-0.1
3,548,814	+				+0.4
3,548,814	+				+1.4
3,548,816	-				-3.2
3,548,816	-				-1.5
3,548,822	-				-1.2
3,548,822	-				-0.5
3,548,822	-				-1.9
3,548,829	+				+0.0
3,548,837	-				-0.5
3,548,872	-				-0.2
3,548,879	-				+1.0
3,548,886	-				-1.6
3,548,911	+		CCNA_03375	0.12	+0.1
3,548,925	+		CCNA_03375	0.14	+0.2
3,548,926	+		CCNA_03375	0.14	+0.8
3,548,969	+		CCNA_03375	0.19	-0.3
3,548,977	-		CCNA_03375	0.20	+0.9
3,548,977	-		CCNA_03375	0.20	-0.1
3,549,014	+		CCNA_03375	0.24	-1.5
3,549,018	+		CCNA_03375	0.24	+1.1
3,549,018	+		CCNA_03375	0.24	-0.5
3,549,026	-		CCNA_03375	0.25	+2.7
3,549,026	-		CCNA_03375	0.25	+2.8
3,549,026	-		CCNA_03375	0.25	+2.9
3,549,026	-		CCNA_03375	0.25	+3.0
3,549,040	-				+4.1
3,549,040	-		CCNA_03375	0.27	+3.0
3,549,040	-		CCNA_03375	0.27	+3.1
3,549,040	-		CCNA_03375	0.27	+2.8
3,549,053	+		CCNA_03375	0.28	+1.9
3,549,055	+		CCNA_03375	0.28	-0.7
3,549,061	-		CCNA_03375	0.29	+3.2
3,549,061	-		CCNA_03375	0.29	+3.0
3,549,061	-				+2.3
3,549,061	-		CCNA_03375	0.29	+2.9
3,549,070	+		CCNA_03375	0.30	+0.5
3,549,078	-		CCNA_03375	0.31	+0.8
3,549,078	-		CCNA_03375	0.31	+0.4
3,549,078	-		CCNA_03375	0.31	+0.4
3,549,078	-		CCNA_03375	0.31	-0.3
3,549,078	-		CCNA_03375	0.31	-0.1
3,549,078	-		CCNA_03375	0.31	+0.8
3,549,078	-		CCNA_03375	0.31	-0.5
3,549,078	-		CCNA_03375	0.31	+0.5
3,549,106	-		CCNA_03375	0.34	+3.0
3,549,181	+		CCNA_03375	0.43	-0.4
3,549,189	-		CCNA_03375	0.44	-1.1
3,549,191	+		CCNA_03375	0.44	-2.3
3,549,199	-		CCNA_03375	0.45	+1.0
3,549,214	+		CCNA_03375	0.47	-0.4
3,549,279	+		CCNA_03375	0.54	-0.6
3,549,340	+		CCNA_03375	0.61	-0.4
3,549,340	+		CCNA_03375	0.61	-0.1
3,549,340	+		CCNA_03375	0.61	-1.0
3,549,340	+		CCNA_03375	0.61	-0.1
3,549,347	+		CCNA_03375	0.62	-0.5
3,549,348	+		CCNA_03375	0.62	-2.5
3,549,348	-		CCNA_03375	0.62	+0.4
3,549,348	-		CCNA_03375	0.62	-2.0
3,549,348	-		CCNA_03375	0.62	-1.0
3,549,355	-		CCNA_03375	0.63	-1.7
3,549,382	+		CCNA_03375	0.66	-0.9
3,549,382	+		CCNA_03375	0.66	-0.6
3,549,390	-		CCNA_03375	0.67	-0.8
3,549,390	-		CCNA_03375	0.67	-0.6
3,549,448	+		CCNA_03375	0.73	-1.6
3,549,499	-		CCNA_03375	0.79	+0.7
3,549,540	+		CCNA_03375	0.84	+0.9
3,549,557	-		CCNA_03375	0.86	+1.2
3,549,557	-		CCNA_03375	0.86	-2.2
3,549,557	-		CCNA_03375	0.86	-0.1
3,549,624	+				-3.0
3,549,624	+				-0.6
3,549,632	-				+0.9
3,549,642	-				-1.0
3,549,657	+				+0.6
3,549,685	-				-0.5
3,549,689	-				+3.0
3,549,689	-				-2.4
3,549,726	+				-0.7
3,549,726	+				-0.3
3,549,734	-		CCNA_03376	0.10	-0.1
3,549,745	-		CCNA_03376	0.12	-0.8
3,549,756	-		CCNA_03376	0.14	+0.3
3,549,760	+		CCNA_03376	0.15	-1.2
3,549,768	-		CCNA_03376	0.17	-1.2
3,549,837	+		CCNA_03376	0.29	+0.5
3,549,838	-		CCNA_03376	0.30	+0.1
3,549,845	-		CCNA_03376	0.31	-0.7
3,549,855	+		CCNA_03376	0.33	-1.4
3,549,855	+		CCNA_03376	0.33	-1.4
3,549,855	+		CCNA_03376	0.33	-1.7
3,549,855	+		CCNA_03376	0.33	-0.1
3,549,855	+		CCNA_03376	0.33	-0.1
3,549,862	+		CCNA_03376	0.34	-1.1
3,549,863	-		CCNA_03376	0.34	-1.7
3,549,863	-		CCNA_03376	0.34	-0.9
3,549,863	-		CCNA_03376	0.34	-1.3
3,549,863	-		CCNA_03376	0.34	+0.5
3,549,863	-		CCNA_03376	0.34	-1.3
3,549,863	-		CCNA_03376	0.34	-0.9
3,549,870	-		CCNA_03376	0.36	+0.4
3,549,938	+		CCNA_03376	0.48	-1.2
3,549,941	-		CCNA_03376	0.49	-2.0
3,549,943	+		CCNA_03376	0.49	+0.5
3,549,943	+		CCNA_03376	0.49	+0.6
3,549,943	+		CCNA_03376	0.49	-1.7
3,549,943	+		CCNA_03376	0.49	+0.3
3,549,943	+		CCNA_03376	0.49	-1.1
3,549,943	+		CCNA_03376	0.49	+1.3
3,549,943	+		CCNA_03376	0.49	+1.3
3,549,943	+		CCNA_03376	0.49	-1.2
3,549,943	+		CCNA_03376	0.49	-3.6
3,549,951	-		CCNA_03376	0.51	-1.1
3,549,951	-		CCNA_03376	0.51	-0.5
3,549,951	-		CCNA_03376	0.51	-1.0
3,549,951	-		CCNA_03376	0.51	-0.7
3,549,951	-		CCNA_03376	0.51	-1.6
3,549,951	-		CCNA_03376	0.51	+0.3
3,549,951	-		CCNA_03376	0.51	-1.3
3,549,951	-		CCNA_03376	0.51	+1.0
3,549,951	-		CCNA_03376	0.51	-0.7
3,549,951	-		CCNA_03376	0.51	-0.8
3,549,951	-		CCNA_03376	0.51	-0.4
3,549,951	-		CCNA_03376	0.51	-2.6
3,549,951	-		CCNA_03376	0.51	-0.1
3,549,951	-		CCNA_03376	0.51	+0.5
3,550,001	-		CCNA_03376	0.60	-0.3
3,550,035	-		CCNA_03376	0.66	-0.1
3,550,070	+		CCNA_03376	0.73	-1.1
3,550,070	+		CCNA_03376	0.73	+0.1
3,550,073	+		CCNA_03376	0.73	+1.3
3,550,101	+		CCNA_03376	0.78	-0.5
3,550,108	+		CCNA_03376	0.80	+0.3
3,550,108	+		CCNA_03376	0.80	-0.6
3,550,109	-		CCNA_03376	0.80	+1.3
3,550,116	-		CCNA_03376	0.81	-1.2
3,550,116	-		CCNA_03376	0.81	-0.4
3,550,116	-		CCNA_03376	0.81	-1.7
3,550,116	-		CCNA_03376	0.81	-0.8
3,550,118	+		CCNA_03376	0.81	-1.5
3,550,118	+		CCNA_03376	0.81	+1.3
3,550,118	+		CCNA_03376	0.81	-1.0
3,550,125	-		CCNA_03376	0.83	+0.2
3,550,126	-		CCNA_03376	0.83	-0.7
3,550,166	-				-0.5
3,550,225	-				-0.8
3,550,227	+				-0.5
3,550,244	-				-0.8
3,550,270	-		CCNA_03377	0.12	-2.1
3,550,280	-		CCNA_03377	0.14	-2.2
3,550,319	+		CCNA_03377	0.23	-1.5
3,550,341	+		CCNA_03377	0.28	+0.3
3,550,349	-		CCNA_03377	0.30	-2.1
3,550,369	+		CCNA_03377	0.34	-1.3
3,550,371	+		CCNA_03377	0.34	-0.6
3,550,371	+		CCNA_03377	0.34	-1.8
3,550,371	-		CCNA_03377	0.34	+0.1
3,550,396	-		CCNA_03377	0.40	-1.1
3,550,425	-				+0.5
3,550,427	+		CCNA_03377	0.47	+0.9
3,550,435	-		CCNA_03377	0.48	-0.6
3,550,435	-		CCNA_03377	0.48	-1.4
3,550,446	+		CCNA_03377	0.51	-0.5
3,550,475	-		CCNA_03377	0.57	-1.4
3,550,501	-		CCNA_03377	0.63	-1.0
3,550,502	+		CCNA_03377	0.63	+0.0
3,550,510	-		CCNA_03377	0.65	-0.7
3,550,510	-		CCNA_03377	0.65	+0.1
3,550,536	+		CCNA_03377	0.71	-0.6
3,550,536	+		CCNA_03377	0.71	-2.0
3,550,544	-		CCNA_03377	0.72	-0.7
3,550,544	-		CCNA_03377	0.72	-2.2
3,550,583	+		CCNA_03377	0.81	-0.9
3,550,588	+		CCNA_03377	0.82	+0.7
3,550,642	+				-0.3
3,550,669	-				-1.9
3,550,669	-				+0.8
3,550,669	-				-1.6