Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01833

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,962,569	-		CCNA_01832	0.60	+2.1
1,962,581	+		CCNA_01832	0.60	-0.2
1,962,684	+		CCNA_01832	0.65	-0.1
1,962,732	+		CCNA_01832	0.67	-0.1
1,962,740	-		CCNA_01832	0.67	-0.6
1,962,740	-		CCNA_01832	0.67	+0.8
1,962,756	+		CCNA_01832	0.68	-0.1
1,962,796	-		CCNA_01832	0.70	+1.4
1,962,801	+		CCNA_01832	0.70	-0.8
1,962,824	-		CCNA_01832	0.71	+0.5
1,962,826	+		CCNA_01832	0.71	-0.6
1,963,013	+		CCNA_01832	0.79	-0.2
1,963,014	-		CCNA_01832	0.79	-0.6
1,963,022	-		CCNA_01832	0.80	+2.9
1,963,023	+		CCNA_01832	0.80	+0.4
1,963,031	-		CCNA_01832	0.80	+0.5
1,963,037	-		CCNA_01832	0.80	-0.0
1,963,041	+		CCNA_01832	0.81	-0.0
1,963,123	-		CCNA_01832	0.84	+0.9
1,963,143	-		CCNA_01832	0.85	-0.6
1,963,152	+		CCNA_01832	0.85	+0.4
1,963,152	+		CCNA_01832	0.85	+0.3
1,963,152	+		CCNA_01832	0.85	+0.7
1,963,160	-		CCNA_01832	0.86	-0.7
1,963,182	-		CCNA_01832	0.87	-1.4
1,963,182	-		CCNA_01832	0.87	-1.2
1,963,231	+		CCNA_01832	0.89	+1.7
1,963,236	+		CCNA_01832	0.89	-1.6
1,963,241	+		CCNA_01832	0.89	+0.5
1,963,244	-		CCNA_01832	0.89	-0.6
1,963,244	-		CCNA_01832	0.89	-2.0
1,963,255	-		CCNA_01832	0.90	+1.4
1,963,257	+				+0.0
1,963,257	+				+0.5
1,963,257	+				+1.4
1,963,257	+				-0.4
1,963,257	+				+0.7
1,963,260	-				+1.2
1,963,262	+				-1.1
1,963,262	+				-1.6
1,963,265	-				-0.3
1,963,265	-				-0.3
1,963,265	-				-1.0
1,963,334	+				-0.1
1,963,334	+				-1.7
1,963,357	+				+0.5
1,963,367	-				+0.9
1,963,377	+				+0.3
1,963,385	-				-0.3
1,963,386	-				-0.5
1,963,438	+				+0.2
1,963,438	+				-0.1
1,963,441	+				+1.2
1,963,446	-				-1.1
1,963,600	-				+2.3
1,963,607	+				-0.3
1,963,675	+		CCNA_01833	0.13	-0.3
1,963,727	-		CCNA_01833	0.17	-0.4
1,963,739	+		CCNA_01833	0.18	-0.2
1,963,742	-		CCNA_01833	0.18	-1.4
1,963,742	-		CCNA_01833	0.18	-1.0
1,963,752	-		CCNA_01833	0.19	-0.8
1,963,784	+		CCNA_01833	0.21	-1.3
1,963,804	+		CCNA_01833	0.23	+0.3
1,963,809	+		CCNA_01833	0.23	+0.1
1,963,871	+		CCNA_01833	0.27	-0.5
1,963,913	+		CCNA_01833	0.30	-1.7
1,963,927	+		CCNA_01833	0.31	+1.2
1,963,949	-		CCNA_01833	0.33	-1.6
1,963,970	-		CCNA_01833	0.34	+1.9
1,963,997	-		CCNA_01833	0.36	+1.8
1,964,050	-		CCNA_01833	0.40	-0.6
1,964,050	-		CCNA_01833	0.40	-1.1
1,964,054	+		CCNA_01833	0.40	-1.8
1,964,054	+		CCNA_01833	0.40	-0.4
1,964,054	+		CCNA_01833	0.40	-0.7
1,964,062	-		CCNA_01833	0.41	-0.4
1,964,066	+		CCNA_01833	0.41	+0.7
1,964,066	+		CCNA_01833	0.41	+0.3
1,964,066	+				+0.7
1,964,074	-		CCNA_01833	0.42	+1.4
1,964,148	+		CCNA_01833	0.47	+1.7
1,964,148	+		CCNA_01833	0.47	+0.3
1,964,161	-		CCNA_01833	0.48	-0.8
1,964,172	+		CCNA_01833	0.49	+0.1
1,964,210	-		CCNA_01833	0.51	+1.7
1,964,227	-		CCNA_01833	0.53	+0.6
1,964,252	-		CCNA_01833	0.54	-0.9
1,964,261	+		CCNA_01833	0.55	+0.6
1,964,269	-		CCNA_01833	0.56	-2.1
1,964,286	+		CCNA_01833	0.57	+0.7
1,964,289	-		CCNA_01833	0.57	+1.2
1,964,302	+		CCNA_01833	0.58	-1.1
1,964,320	-		CCNA_01833	0.59	-1.1
1,964,322	+		CCNA_01833	0.59	-0.7
1,964,322	+		CCNA_01833	0.59	-0.3
1,964,330	-		CCNA_01833	0.60	+2.1
1,964,357	-		CCNA_01833	0.62	-1.3
1,964,364	+		CCNA_01833	0.62	-0.8
1,964,372	-		CCNA_01833	0.63	-1.4
1,964,399	+		CCNA_01833	0.65	+2.1
1,964,399	+		CCNA_01833	0.65	-2.5
1,964,399	+		CCNA_01833	0.65	-0.1
1,964,402	-		CCNA_01833	0.65	+2.1
1,964,408	-		CCNA_01833	0.65	+3.1
1,964,435	+		CCNA_01833	0.67	+1.7
1,964,443	-		CCNA_01833	0.68	+0.5
1,964,443	-		CCNA_01833	0.68	-1.2
1,964,549	+		CCNA_01833	0.75	+0.1
1,964,557	+		CCNA_01833	0.76	-1.8
1,964,614	+		CCNA_01833	0.80	-1.8
1,964,618	+		CCNA_01833	0.80	-0.7
1,964,651	-		CCNA_01833	0.83	+0.9
1,964,651	-		CCNA_01833	0.83	-0.8
1,964,658	+		CCNA_01833	0.83	+1.0
1,964,717	-		CCNA_01833	0.87	-2.1
1,964,799	+				+2.4
1,964,890	+				+0.5
1,964,890	+				+1.0
1,964,958	-				-0.7
1,964,998	-				-0.7
1,965,013	-				-0.2
1,965,089	-				+0.5
1,965,116	-				+1.7
1,965,116	-				+3.8
1,965,156	+				-0.5
1,965,165	+				+2.2
1,965,251	-				+0.2
1,965,251	-				+0.9
1,965,252	+				-0.1
1,965,346	-		CCNA_01834	0.13	+2.0
1,965,385	+		CCNA_01834	0.15	-2.9
1,965,389	+		CCNA_01834	0.15	-1.0
1,965,407	-		CCNA_01834	0.16	+0.1
1,965,439	-		CCNA_01834	0.17	+1.3
1,965,467	+		CCNA_01834	0.18	+2.1
1,965,526	+		CCNA_01834	0.20	-1.1
1,965,569	+		CCNA_01834	0.22	-0.0
1,965,577	-		CCNA_01834	0.23	-1.2
1,965,577	-		CCNA_01834	0.23	-0.1
1,965,577	-		CCNA_01834	0.23	+1.6
1,965,606	+		CCNA_01834	0.24	+0.1
1,965,622	-		CCNA_01834	0.24	-0.2
1,965,640	+		CCNA_01834	0.25	+1.1
1,965,647	-		CCNA_01834	0.25	+2.8
1,965,671	+		CCNA_01834	0.26	+0.1
1,965,671	+		CCNA_01834	0.26	-0.8
1,965,679	-		CCNA_01834	0.27	+1.7
1,965,679	-		CCNA_01834	0.27	+0.5
1,965,679	-		CCNA_01834	0.27	+0.2
1,965,786	-		CCNA_01834	0.31	-0.5
1,965,797	+		CCNA_01834	0.31	+2.0
1,965,805	-		CCNA_01834	0.32	-0.6
1,965,839	-		CCNA_01834	0.33	-0.3
1,965,861	+		CCNA_01834	0.34	-0.2