Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01682

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,808,359	+		CCNA_01680	0.63	+1.4
1,808,368	+		CCNA_01680	0.64	+1.9
1,808,398	+		CCNA_01680	0.66	+1.7
1,808,466	+		CCNA_01680	0.71	+2.1
1,808,479	-		CCNA_01680	0.72	+0.2
1,808,530	+		CCNA_01680	0.76	+1.4
1,808,537	+		CCNA_01680	0.76	+1.4
1,808,549	+		CCNA_01680	0.77	+3.2
1,808,625	+		CCNA_01680	0.83	+0.7
1,808,638	-		CCNA_01680	0.84	-0.3
1,808,682	-		CCNA_01680	0.87	+0.2
1,808,741	-				-2.1
1,808,755	-				-0.8
1,808,764	+				+1.6
1,808,800	+				+3.6
1,808,827	+				+1.8
1,808,827	+				+1.9
1,808,827	+				+2.6
1,808,834	-				+0.6
1,808,835	-				-2.1
1,808,835	-				-0.9
1,808,902	+		CCNA_01681	0.10	+2.5
1,808,913	-		CCNA_01681	0.12	-2.0
1,808,935	+		CCNA_01681	0.17	+1.6
1,808,950	+		CCNA_01681	0.20	+1.2
1,809,072	+		CCNA_01681	0.44	+2.9
1,809,110	+		CCNA_01681	0.51	+1.6
1,809,137	+		CCNA_01681	0.56	+1.9
1,809,137	+		CCNA_01681	0.56	+1.7
1,809,223	-		CCNA_01681	0.73	+0.4
1,809,250	+		CCNA_01681	0.79	+1.5
1,809,381	+				+1.6
1,809,456	+		CCNA_01682	0.11	-1.5
1,809,463	+		CCNA_01682	0.12	-0.1
1,809,488	+		CCNA_01682	0.14	+0.6
1,809,492	+		CCNA_01682	0.15	+0.6
1,809,513	+		CCNA_01682	0.17	-1.0
1,809,521	-		CCNA_01682	0.18	+0.0
1,809,521	-		CCNA_01682	0.18	-0.4
1,809,521	-		CCNA_01682	0.18	-0.6
1,809,521	-		CCNA_01682	0.18	+0.7
1,809,625	+		CCNA_01682	0.29	-0.6
1,809,625	+		CCNA_01682	0.29	-1.6
1,809,625	+		CCNA_01682	0.29	-1.3
1,809,635	+		CCNA_01682	0.30	+0.4
1,809,635	-		CCNA_01682	0.30	-0.4
1,809,660	+		CCNA_01682	0.33	+0.4
1,809,668	-		CCNA_01682	0.33	-0.3
1,809,677	-		CCNA_01682	0.34	-1.8
1,809,868	-		CCNA_01682	0.55	-0.3
1,809,872	+		CCNA_01682	0.55	-2.1
1,809,897	-		CCNA_01682	0.58	-1.3
1,809,962	-		CCNA_01682	0.65	+1.0
1,809,963	-		CCNA_01682	0.65	-0.1
1,810,024	-		CCNA_01682	0.71	-1.3
1,810,046	+		CCNA_01682	0.74	-0.8
1,810,069	+		CCNA_01682	0.76	-1.8
1,810,083	-		CCNA_01682	0.78	+0.6
1,810,111	-		CCNA_01682	0.81	+0.5
1,810,221	+				-1.9
1,810,221	+				-0.2
1,810,227	+				-0.7
1,810,227	+				-0.1
1,810,288	+				-2.1
1,810,288	+				-2.2
1,810,288	+				+0.4
1,810,288	+				-1.3
1,810,296	-				+0.0
1,810,296	-				-0.5
1,810,296	-				+0.2
1,810,296	-				-1.6
1,810,307	+				-0.3
1,810,342	-				-0.0
1,810,391	-				+0.2
1,810,415	-		CCNA_01683	0.10	+2.4
1,810,429	-		CCNA_01683	0.11	+0.7
1,810,517	-		CCNA_01683	0.19	+0.4
1,810,539	+		CCNA_01683	0.20	-0.4
1,810,539	+		CCNA_01683	0.20	-0.9
1,810,556	-		CCNA_01683	0.22	-0.0
1,810,590	-		CCNA_01683	0.24	-1.1
1,810,614	-		CCNA_01683	0.26	-1.8
1,810,706	+		CCNA_01683	0.34	-0.3
1,810,793	-		CCNA_01683	0.41	-1.5
1,810,806	-		CCNA_01683	0.42	-1.6
1,810,823	+		CCNA_01683	0.44	+0.4
1,810,837	-		CCNA_01683	0.45	-1.5
1,810,852	+		CCNA_01683	0.46	-0.9
1,810,866	+		CCNA_01683	0.47	-0.5
1,810,887	+		CCNA_01683	0.49	-0.7
1,810,938	+		CCNA_01683	0.53	-0.7
1,810,996	+		CCNA_01683	0.58	-1.1
1,811,009	+		CCNA_01683	0.59	-0.1
1,811,009	+		CCNA_01683	0.59	+0.0
1,811,009	+		CCNA_01683	0.59	-0.1
1,811,009	+		CCNA_01683	0.59	+3.6
1,811,017	-		CCNA_01683	0.59	+1.4
1,811,017	-		CCNA_01683	0.59	-0.9
1,811,017	-				+2.6
1,811,019	+		CCNA_01683	0.60	-1.1
1,811,032	-		CCNA_01683	0.61	+1.0
1,811,032	-		CCNA_01683	0.61	-1.9
1,811,068	+		CCNA_01683	0.64	-0.1
1,811,088	+		CCNA_01683	0.65	-0.4
1,811,088	+		CCNA_01683	0.65	+0.9
1,811,188	+		CCNA_01683	0.73	-0.8
1,811,188	+		CCNA_01683	0.73	+0.2
1,811,196	-		CCNA_01683	0.74	+1.3
1,811,196	-		CCNA_01683	0.74	+0.3
1,811,196	-		CCNA_01683	0.74	+0.3
1,811,196	-		CCNA_01683	0.74	-0.2
1,811,201	-		CCNA_01683	0.75	+0.5
1,811,212	+		CCNA_01683	0.75	-1.3
1,811,220	-		CCNA_01683	0.76	+1.2
1,811,220	-		CCNA_01683	0.76	+1.0
1,811,225	+		CCNA_01683	0.76	+0.0
1,811,247	+		CCNA_01683	0.78	-0.2