Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01201

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,324,898	+		CCNA_01200	0.63	-1.3
1,324,906	-		CCNA_01200	0.63	-0.1
1,324,906	-		CCNA_01200	0.63	+0.9
1,324,906	-		CCNA_01200	0.63	-0.7
1,324,948	+		CCNA_01200	0.65	-1.1
1,325,011	+		CCNA_01200	0.68	-0.6
1,325,042	+		CCNA_01200	0.69	-0.5
1,325,047	+		CCNA_01200	0.70	-0.3
1,325,135	+		CCNA_01200	0.73	-1.8
1,325,135	+		CCNA_01200	0.73	+0.5
1,325,148	-		CCNA_01200	0.74	-0.9
1,325,196	+		CCNA_01200	0.76	-0.1
1,325,224	+		CCNA_01200	0.77	+0.4
1,325,224	-		CCNA_01200	0.77	-0.3
1,325,244	-		CCNA_01200	0.78	+0.0
1,325,257	+		CCNA_01200	0.79	-2.9
1,325,292	+		CCNA_01200	0.80	-1.2
1,325,300	-		CCNA_01200	0.81	-1.3
1,325,352	+		CCNA_01200	0.83	-1.0
1,325,352	+		CCNA_01200	0.83	-0.3
1,325,360	-		CCNA_01200	0.83	-1.1
1,325,435	+		CCNA_01200	0.87	-1.1
1,325,469	-		CCNA_01200	0.88	-0.3
1,325,484	-		CCNA_01200	0.89	-0.7
1,325,484	-		CCNA_01200	0.89	+0.1
1,325,484	-		CCNA_01200	0.89	-1.0
1,325,496	+		CCNA_01200	0.89	-1.0
1,325,504	-		CCNA_01200	0.90	-0.5
1,325,514	-				-0.0
1,325,514	-				-2.1
1,325,514	-				-1.8
1,325,553	+				-1.8
1,325,758	-				-1.0
1,325,789	+				+1.3
1,325,797	-				+1.2
1,325,808	-				-1.0
1,325,829	+				+1.5
1,325,830	+				-1.7
1,325,864	-		CCNA_01201	0.12	-1.1
1,325,874	+		CCNA_01201	0.14	-1.5
1,325,874	+		CCNA_01201	0.14	-0.9
1,325,887	-		CCNA_01201	0.16	-0.6
1,325,925	-		CCNA_01201	0.23	-0.7
1,325,964	+		CCNA_01201	0.31	+0.5
1,325,964	+		CCNA_01201	0.31	-1.4
1,325,964	+		CCNA_01201	0.31	-0.5
1,325,964	+		CCNA_01201	0.31	+0.3
1,325,964	+		CCNA_01201	0.31	-2.2
1,325,972	-		CCNA_01201	0.32	+0.7
1,325,972	-		CCNA_01201	0.32	+1.0
1,325,972	-		CCNA_01201	0.32	+1.0
1,325,972	-		CCNA_01201	0.32	-0.1
1,325,972	-		CCNA_01201	0.32	+0.0
1,325,972	-		CCNA_01201	0.32	+1.1
1,325,972	-		CCNA_01201	0.32	-0.2
1,325,982	-		CCNA_01201	0.34	+0.6
1,326,119	+		CCNA_01201	0.60	+0.3
1,326,129	+		CCNA_01201	0.62	+0.3
1,326,185	+		CCNA_01201	0.73	+0.4
1,326,193	-		CCNA_01201	0.74	+1.0
1,326,234	+		CCNA_01201	0.82	-0.1
1,326,296	-				+0.8
1,326,387	+				-1.3
1,326,389	-				+0.7
1,326,389	-				+1.1
1,326,395	-				+1.8
1,326,395	-				+1.7
1,326,395	-				+1.4
1,326,395	-				+0.8
1,326,406	-				+1.0
1,326,523	-				+2.0
1,326,538	-				+1.2
1,326,538	-				+1.5
1,326,546	-				+0.9
1,326,582	+		CCNA_01202	0.11	-0.9
1,326,595	-		CCNA_01202	0.11	-0.1
1,326,607	-				+0.3
1,326,607	-		CCNA_01202	0.12	+0.2
1,326,610	+		CCNA_01202	0.12	-0.6
1,326,663	-		CCNA_01202	0.14	+0.5
1,326,750	+		CCNA_01202	0.18	-0.4
1,326,750	+		CCNA_01202	0.18	-1.1
1,326,750	+		CCNA_01202	0.18	-1.1
1,326,750	+		CCNA_01202	0.18	+0.0
1,326,758	-		CCNA_01202	0.18	+0.1
1,326,758	-		CCNA_01202	0.18	-1.1
1,326,758	-		CCNA_01202	0.18	-1.5
1,326,758	-		CCNA_01202	0.18	+1.8
1,326,758	-		CCNA_01202	0.18	+1.2
1,326,781	-		CCNA_01202	0.19	-0.2
1,326,788	-		CCNA_01202	0.19	-0.4
1,326,817	+		CCNA_01202	0.20	-0.3
1,326,825	-		CCNA_01202	0.21	-0.6
1,326,846	-		CCNA_01202	0.22	+1.1
1,326,848	-		CCNA_01202	0.22	+1.3
1,326,854	-		CCNA_01202	0.22	+0.6
1,326,888	-		CCNA_01202	0.23	-0.5
1,326,944	-		CCNA_01202	0.26	-0.7
1,326,993	-		CCNA_01202	0.28	+0.1
1,327,031	+		CCNA_01202	0.29	-0.2
1,327,031	-		CCNA_01202	0.29	+0.0
1,327,039	-		CCNA_01202	0.30	+3.5
1,327,039	-		CCNA_01202	0.30	+1.1
1,327,039	-		CCNA_01202	0.30	-0.3
1,327,087	-		CCNA_01202	0.32	+0.9
1,327,096	-		CCNA_01202	0.32	+1.2
1,327,104	-		CCNA_01202	0.32	+0.1
1,327,124	+		CCNA_01202	0.33	-1.5
1,327,132	-		CCNA_01202	0.33	+1.1
1,327,170	+		CCNA_01202	0.35	-3.0
1,327,178	-		CCNA_01202	0.35	-1.0
1,327,236	-		CCNA_01202	0.38	+0.6
1,327,265	-		CCNA_01202	0.39	+0.7
1,327,281	+		CCNA_01202	0.40	-0.7
1,327,281	+		CCNA_01202	0.40	-0.4
1,327,289	-		CCNA_01202	0.40	+0.4