Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01029

Experiment: PYE with benzoic 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with benzoic 0.2 mg/ml
1,114,741	-		CCNA_01028	0.44	+0.3
1,114,759	+		CCNA_01028	0.45	+2.2
1,114,766	+		CCNA_01028	0.46	-1.4
1,114,774	-		CCNA_01028	0.46	-1.3
1,114,775	+		CCNA_01028	0.46	-1.9
1,114,868	+		CCNA_01028	0.52	+0.1
1,114,868	+		CCNA_01028	0.52	+0.6
1,114,871	-		CCNA_01028	0.52	-0.3
1,114,879	+		CCNA_01028	0.53	-2.0
1,114,887	-		CCNA_01028	0.53	-1.1
1,114,912	+		CCNA_01028	0.55	+0.0
1,114,912	+		CCNA_01028	0.55	-0.4
1,114,919	+		CCNA_01028	0.55	+0.1
1,114,941	+		CCNA_01028	0.56	-1.6
1,114,981	+		CCNA_01028	0.59	+2.9
1,115,007	-		CCNA_01028	0.60	-0.0
1,115,007	-		CCNA_01028	0.60	-1.2
1,115,012	+		CCNA_01028	0.61	+3.0
1,115,081	+		CCNA_01028	0.65	+0.6
1,115,094	+		CCNA_01028	0.66	+1.3
1,115,101	+		CCNA_01028	0.66	-0.1
1,115,154	-		CCNA_01028	0.70	-2.0
1,115,154	-		CCNA_01028	0.70	-1.1
1,115,154	-		CCNA_01028	0.70	-1.5
1,115,173	+		CCNA_01028	0.71	-0.5
1,115,174	+		CCNA_01028	0.71	-1.7
1,115,174	+		CCNA_01028	0.71	-1.9
1,115,182	-		CCNA_01028	0.71	-0.6
1,115,191	+		CCNA_01028	0.72	+0.6
1,115,191	+		CCNA_01028	0.72	+0.5
1,115,191	+		CCNA_01028	0.72	+0.1
1,115,191	+		CCNA_01028	0.72	-0.7
1,115,191	+		CCNA_01028	0.72	+0.1
1,115,191	+		CCNA_01028	0.72	+0.6
1,115,191	+		CCNA_01028	0.72	-2.7
1,115,191	+		CCNA_01028	0.72	-0.2
1,115,191	+		CCNA_01028	0.72	-1.2
1,115,191	+		CCNA_01028	0.72	+0.5
1,115,191	+				+1.3
1,115,199	-		CCNA_01028	0.72	+0.1
1,115,199	-		CCNA_01028	0.72	-0.5
1,115,199	-		CCNA_01028	0.72	-0.9
1,115,199	-		CCNA_01028	0.72	+1.0
1,115,199	-		CCNA_01028	0.72	-1.4
1,115,199	-		CCNA_01028	0.72	-0.0
1,115,199	-		CCNA_01028	0.72	-1.1
1,115,199	-		CCNA_01028	0.72	-1.2
1,115,199	-		CCNA_01028	0.72	-1.9
1,115,207	+		CCNA_01028	0.73	-1.9
1,115,240	+		CCNA_01028	0.75	+1.0
1,115,240	+		CCNA_01028	0.75	+0.7
1,115,240	+		CCNA_01028	0.75	-0.8
1,115,240	+		CCNA_01028	0.75	-0.9
1,115,240	+		CCNA_01028	0.75	-0.0
1,115,240	+		CCNA_01028	0.75	-1.0
1,115,240	+		CCNA_01028	0.75	+0.3
1,115,240	+		CCNA_01028	0.75	+0.5
1,115,240	+		CCNA_01028	0.75	-1.6
1,115,248	-		CCNA_01028	0.75	-1.7
1,115,248	-		CCNA_01028	0.75	-1.1
1,115,248	-		CCNA_01028	0.75	-0.8
1,115,248	-		CCNA_01028	0.75	-0.0
1,115,264	+		CCNA_01028	0.76	+1.5
1,115,264	+		CCNA_01028	0.76	-0.4
1,115,272	-		CCNA_01028	0.77	-2.2
1,115,272	-		CCNA_01028	0.77	+1.0
1,115,275	+		CCNA_01028	0.77	-0.5
1,115,280	+		CCNA_01028	0.77	+0.7
1,115,320	+		CCNA_01028	0.80	+0.2
1,115,320	+		CCNA_01028	0.80	-0.9
1,115,320	+		CCNA_01028	0.80	-0.2
1,115,320	+		CCNA_01028	0.80	-1.4
1,115,320	+		CCNA_01028	0.80	-0.0
1,115,320	+		CCNA_01028	0.80	+0.1
1,115,323	-		CCNA_01028	0.80	-1.2
1,115,328	-		CCNA_01028	0.80	-2.5
1,115,328	-		CCNA_01028	0.80	-1.7
1,115,359	-		CCNA_01028	0.82	-0.3
1,115,361	-		CCNA_01028	0.82	-0.3
1,115,376	+		CCNA_01028	0.83	-0.2
1,115,395	+		CCNA_01028	0.85	+0.3
1,115,461	+		CCNA_01028	0.89	-1.1
1,115,481	+		CCNA_01028	0.90	+2.0
1,115,489	-				+0.9
1,115,491	+				-0.4
1,115,501	+				-0.6
1,115,501	+				+0.5
1,115,522	+				-0.3
1,115,540	-				-0.0
1,115,579	-				-1.1
1,115,588	+				-0.0
1,115,713	+				-0.5
1,115,716	-				-0.2
1,115,722	-				+1.7
1,115,754	-				-0.8
1,115,764	-				+1.0
1,115,768	-				+0.8
1,115,771	+				-0.1
1,115,771	+				+1.5
1,115,779	-				-0.6
1,115,779	-				+2.3
1,115,779	-				-0.8
1,115,835	+				-1.8
1,115,872	+				-1.8
1,115,872	+				+0.1
1,115,872	+				-1.0
1,115,880	-				-0.5
1,115,895	+				-0.5
1,115,903	-				-1.7
1,115,921	+				-0.0
1,115,929	-				-0.2
1,115,961	+				-1.3
1,115,961	+				+0.3
1,115,995	-				+0.4
1,115,995	-				+0.4
1,116,002	-				-0.8
1,116,018	+				-1.8
1,116,023	+				-0.9
1,116,031	-				+0.8
1,116,032	+				-1.3
1,116,040	-				-1.5
1,116,092	-		CCNA_01029	0.12	+0.3
1,116,114	+		CCNA_01029	0.12	-3.7
1,116,125	+		CCNA_01029	0.13	+0.3
1,116,129	-		CCNA_01029	0.13	+0.0
1,116,146	+		CCNA_01029	0.13	-0.4
1,116,146	-		CCNA_01029	0.13	+0.2
1,116,154	-		CCNA_01029	0.14	-0.0
1,116,155	-		CCNA_01029	0.14	+0.4
1,116,155	-		CCNA_01029	0.14	+0.2
1,116,166	-		CCNA_01029	0.14	-2.2
1,116,172	+		CCNA_01029	0.14	-2.1
1,116,252	+		CCNA_01029	0.17	+0.1
1,116,284	-		CCNA_01029	0.18	-0.1
1,116,286	-		CCNA_01029	0.18	-0.3
1,116,304	-		CCNA_01029	0.19	-0.6
1,116,304	-		CCNA_01029	0.19	-1.3
1,116,317	-		CCNA_01029	0.19	-0.2
1,116,317	-		CCNA_01029	0.19	-1.5
1,116,360	+		CCNA_01029	0.20	+1.6
1,116,360	+		CCNA_01029	0.20	-2.1
1,116,368	-		CCNA_01029	0.21	-2.6
1,116,382	+		CCNA_01029	0.21	-1.2
1,116,390	-		CCNA_01029	0.21	-0.5
1,116,412	+		CCNA_01029	0.22	-1.1
1,116,447	+		CCNA_01029	0.23	-1.7
1,116,450	-		CCNA_01029	0.23	-0.6
1,116,459	+		CCNA_01029	0.24	-0.2
1,116,500	-		CCNA_01029	0.25	+1.4
1,116,542	-		CCNA_01029	0.26	-0.3
1,116,587	-		CCNA_01029	0.28	+0.4
1,116,614	+		CCNA_01029	0.29	-1.2
1,116,632	-		CCNA_01029	0.29	+0.5
1,116,647	-		CCNA_01029	0.30	-1.9
1,116,672	-		CCNA_01029	0.30	-0.5
1,116,673	+		CCNA_01029	0.30	-1.0
1,116,685	-		CCNA_01029	0.31	-1.4
1,116,690	-		CCNA_01029	0.31	+0.1
1,116,692	+		CCNA_01029	0.31	-0.2
1,116,719	+		CCNA_01029	0.32	-0.3
1,116,719	+		CCNA_01029	0.32	-0.9
1,116,749	-		CCNA_01029	0.33	-3.0
1,116,768	+		CCNA_01029	0.34	-0.3
1,116,800	+		CCNA_01029	0.35	-1.7
1,116,814	-		CCNA_01029	0.35	-0.7
1,116,814	-		CCNA_01029	0.35	-2.0
1,116,819	+		CCNA_01029	0.35	-0.3
1,116,820	-		CCNA_01029	0.35	-1.7
1,116,832	-		CCNA_01029	0.36	+0.3
1,116,847	-		CCNA_01029	0.36	+0.8
1,116,896	+		CCNA_01029	0.38	+1.0
1,116,931	+		CCNA_01029	0.39	-0.2
1,116,952	+		CCNA_01029	0.40	-1.7
1,116,956	+		CCNA_01029	0.40	+0.5
1,116,967	+		CCNA_01029	0.40	-0.8
1,116,969	-		CCNA_01029	0.40	+1.2
1,116,975	+		CCNA_01029	0.40	-0.4
1,116,997	+		CCNA_01029	0.41	+0.6
1,117,020	-		CCNA_01029	0.42	+0.5
1,117,024	+		CCNA_01029	0.42	-0.9
1,117,029	+		CCNA_01029	0.42	-1.6
1,117,032	-		CCNA_01029	0.42	-0.5
1,117,032	-		CCNA_01029	0.42	-1.7
1,117,034	+		CCNA_01029	0.42	+2.5
1,117,034	+		CCNA_01029	0.42	+2.2
1,117,037	-		CCNA_01029	0.42	-0.5
1,117,042	-		CCNA_01029	0.42	-1.3
1,117,053	+		CCNA_01029	0.43	-0.4
1,117,060	-		CCNA_01029	0.43	-1.4
1,117,067	+		CCNA_01029	0.43	-0.1
1,117,151	+		CCNA_01029	0.46	-0.0
1,117,168	+		CCNA_01029	0.47	+0.1
1,117,168	+		CCNA_01029	0.47	-0.9
1,117,176	-		CCNA_01029	0.47	+0.1
1,117,178	+		CCNA_01029	0.47	+0.9
1,117,186	-		CCNA_01029	0.47	-0.9
1,117,258	+		CCNA_01029	0.49	-0.9
1,117,258	+		CCNA_01029	0.49	-1.8
1,117,266	-		CCNA_01029	0.50	+0.5
1,117,266	-		CCNA_01029	0.50	-1.6
1,117,266	-		CCNA_01029	0.50	-0.9
1,117,266	-		CCNA_01029	0.50	-1.1
1,117,266	-		CCNA_01029	0.50	-1.0
1,117,322	+		CCNA_01029	0.52	-1.4
1,117,325	-		CCNA_01029	0.52	-2.1
1,117,343	-		CCNA_01029	0.52	-0.5
1,117,343	-		CCNA_01029	0.52	+0.2
1,117,372	+		CCNA_01029	0.53	-2.0
1,117,372	+		CCNA_01029	0.53	-0.5
1,117,380	-		CCNA_01029	0.53	-0.9
1,117,385	-		CCNA_01029	0.54	-0.5
1,117,392	+		CCNA_01029	0.54	-1.7
1,117,417	+				+1.7
1,117,417	+		CCNA_01029	0.55	-0.5
1,117,417	+		CCNA_01029	0.55	-1.3
1,117,425	-		CCNA_01029	0.55	+0.6
1,117,425	-		CCNA_01029	0.55	+1.1
1,117,425	-		CCNA_01029	0.55	-1.0
1,117,425	-		CCNA_01029	0.55	-0.9
1,117,425	-		CCNA_01029	0.55	-0.0
1,117,425	-		CCNA_01029	0.55	-2.2
1,117,425	-		CCNA_01029	0.55	+1.3
1,117,426	-		CCNA_01029	0.55	-1.2
1,117,450	-		CCNA_01029	0.56	-0.9
1,117,479	+		CCNA_01029	0.57	+0.3
1,117,485	+		CCNA_01029	0.57	-0.2
1,117,492	-		CCNA_01029	0.57	-1.2
1,117,492	-		CCNA_01029	0.57	-1.3
1,117,492	-		CCNA_01029	0.57	-0.2
1,117,493	-		CCNA_01029	0.57	-0.5
1,117,523	-		CCNA_01029	0.58	-0.4
1,117,523	-		CCNA_01029	0.58	-1.3
1,117,523	-		CCNA_01029	0.58	-0.3
1,117,603	+		CCNA_01029	0.61	-0.5
1,117,608	+		CCNA_01029	0.61	-1.3
1,117,619	+		CCNA_01029	0.61	-0.4
1,117,619	+		CCNA_01029	0.61	-2.1
1,117,619	+		CCNA_01029	0.61	-1.9
1,117,627	-		CCNA_01029	0.61	-1.7
1,117,627	-		CCNA_01029	0.61	-0.9
1,117,706	-		CCNA_01029	0.64	+2.4
1,117,776	-		CCNA_01029	0.66	-0.4
1,117,786	-		CCNA_01029	0.67	-0.6
1,117,827	+		CCNA_01029	0.68	-2.0
1,117,827	+		CCNA_01029	0.68	-0.3
1,117,827	+		CCNA_01029	0.68	+0.3
1,117,841	-		CCNA_01029	0.68	+0.3
1,117,846	+		CCNA_01029	0.69	-2.2
1,117,854	-		CCNA_01029	0.69	+0.5
1,117,859	-		CCNA_01029	0.69	+0.2
1,117,859	-		CCNA_01029	0.69	-2.4
1,117,874	+		CCNA_01029	0.69	-0.6
1,117,874	+		CCNA_01029	0.69	-2.1
1,117,882	-		CCNA_01029	0.70	-0.2
1,117,884	-		CCNA_01029	0.70	-2.1
1,117,903	+		CCNA_01029	0.70	-0.7
1,117,903	+		CCNA_01029	0.70	+1.3
1,117,906	-		CCNA_01029	0.70	-1.6
1,117,911	-		CCNA_01029	0.71	+0.1
1,117,911	-		CCNA_01029	0.71	-0.1
1,117,944	-		CCNA_01029	0.72	-0.6
1,117,948	-		CCNA_01029	0.72	-1.6
1,118,030	+		CCNA_01029	0.74	-0.2
1,118,031	-		CCNA_01029	0.75	-0.2
1,118,066	-		CCNA_01029	0.76	-1.5
1,118,072	+		CCNA_01029	0.76	-0.3
1,118,072	+		CCNA_01029	0.76	-2.2
1,118,138	-		CCNA_01029	0.78	-0.0
1,118,138	-		CCNA_01029	0.78	+0.7
1,118,157	-		CCNA_01029	0.79	+0.2
1,118,167	+		CCNA_01029	0.79	-0.3
1,118,167	+		CCNA_01029	0.79	-0.7
1,118,167	+		CCNA_01029	0.79	-2.5
1,118,167	+		CCNA_01029	0.79	+1.3
1,118,167	+		CCNA_01029	0.79	+0.1
1,118,167	+		CCNA_01029	0.79	-2.3
1,118,167	+		CCNA_01029	0.79	-0.5
1,118,175	-		CCNA_01029	0.79	-1.9
1,118,175	-		CCNA_01029	0.79	-0.7
1,118,203	+		CCNA_01029	0.80	-1.6
1,118,203	+		CCNA_01029	0.80	-1.1
1,118,203	+		CCNA_01029	0.80	+0.6
1,118,203	+		CCNA_01029	0.80	-0.5
1,118,203	+		CCNA_01029	0.80	-2.0
1,118,211	-		CCNA_01029	0.80	+0.5
1,118,211	-		CCNA_01029	0.80	-0.2
1,118,211	-		CCNA_01029	0.80	+0.4
1,118,211	-		CCNA_01029	0.80	-0.4
1,118,211	-		CCNA_01029	0.80	-1.6
1,118,213	+		CCNA_01029	0.80	-0.6
1,118,296	-		CCNA_01029	0.83	-0.1
1,118,301	-		CCNA_01029	0.83	-1.1
1,118,307	+		CCNA_01029	0.83	+0.6
1,118,308	+		CCNA_01029	0.83	-0.3
1,118,317	-		CCNA_01029	0.84	+0.2
1,118,393	+		CCNA_01029	0.86	-1.6
1,118,476	+		CCNA_01029	0.89	-0.2
1,118,479	-		CCNA_01029	0.89	-0.8
1,118,486	+		CCNA_01029	0.89	-1.0
1,118,499	-		CCNA_01029	0.90	-0.4
1,118,536	+				-0.9
1,118,536	+				-1.3
1,118,536	+				-0.0
1,118,536	+				-1.2
1,118,536	+				-1.1
1,118,544	-				+0.1
1,118,544	-				+1.0
1,118,544	-				-0.2
1,118,544	-				+0.1
1,118,544	-				+0.4
1,118,544	-				+1.5
1,118,544	-				+1.2
1,118,561	-				+0.3
1,118,569	-				-1.7
1,118,619	+				-1.2
1,118,627	-				+0.3
1,118,663	-				+0.8
1,118,683	+				-1.2
1,118,689	+				-0.2
1,118,697	+				-0.3
1,118,705	-				+0.2
1,118,736	+				-1.4
1,118,744	-				+0.0
1,118,744	-				-0.3
1,118,744	-				-1.8
1,118,757	-				+0.0
1,118,784	+				-0.9
1,118,817	+				-0.5
1,118,842	-				-1.0
1,118,869	-				-0.7
1,118,876	-				-0.4
1,118,883	+				+0.1
1,118,890	-				+0.8
1,118,906	+				-1.4
1,118,995	+		CCNA_01030	0.18	-0.5
1,118,995	+		CCNA_01030	0.18	+0.5
1,118,995	+		CCNA_01030	0.18	-2.6
1,118,995	+		CCNA_01030	0.18	-0.0
1,118,995	+		CCNA_01030	0.18	-0.2
1,119,003	-		CCNA_01030	0.19	+1.6
1,119,003	-		CCNA_01030	0.19	-0.6
1,119,003	-		CCNA_01030	0.19	-0.7
1,119,003	-		CCNA_01030	0.19	-1.0
1,119,003	-		CCNA_01030	0.19	-0.1
1,119,016	+		CCNA_01030	0.21	-2.1
1,119,026	+		CCNA_01030	0.23	-2.7
1,119,026	+				+2.3
1,119,026	+		CCNA_01030	0.23	-1.9
1,119,026	+		CCNA_01030	0.23	-1.6
1,119,026	+		CCNA_01030	0.23	-0.7
1,119,031	+		CCNA_01030	0.24	+1.7
1,119,031	+		CCNA_01030	0.24	-1.6
1,119,031	+		CCNA_01030	0.24	-1.2
1,119,031	+		CCNA_01030	0.24	-0.3
1,119,031	+		CCNA_01030	0.24	-2.2
1,119,031	+		CCNA_01030	0.24	-1.2
1,119,031	+		CCNA_01030	0.24	-0.8
1,119,031	+		CCNA_01030	0.24	-1.1
1,119,031	+		CCNA_01030	0.24	-0.7
1,119,031	+		CCNA_01030	0.24	-1.2
1,119,034	-		CCNA_01030	0.24	-1.9
1,119,034	-		CCNA_01030	0.24	-1.4
1,119,034	-		CCNA_01030	0.24	-0.0
1,119,039	-		CCNA_01030	0.25	+1.0
1,119,039	-		CCNA_01030	0.25	-0.9
1,119,039	-		CCNA_01030	0.25	-1.4
1,119,039	-		CCNA_01030	0.25	-0.3
1,119,039	-		CCNA_01030	0.25	+0.5
1,119,039	-		CCNA_01030	0.25	-0.7
1,119,039	-		CCNA_01030	0.25	-0.8
1,119,039	-		CCNA_01030	0.25	-0.5
1,119,039	-		CCNA_01030	0.25	+0.9
1,119,039	-		CCNA_01030	0.25	+1.0
1,119,039	-		CCNA_01030	0.25	+0.4
1,119,039	-		CCNA_01030	0.25	-0.6
1,119,039	-		CCNA_01030	0.25	-0.1
1,119,039	-		CCNA_01030	0.25	-0.8
1,119,039	-		CCNA_01030	0.25	-1.7
1,119,039	-		CCNA_01030	0.25	-0.2
1,119,039	-		CCNA_01030	0.25	+0.0
1,119,051	+		CCNA_01030	0.27	+0.7
1,119,068	+		CCNA_01030	0.30	-0.4
1,119,068	+		CCNA_01030	0.30	-1.7
1,119,075	+		CCNA_01030	0.31	-0.2
1,119,076	-		CCNA_01030	0.31	+0.7
1,119,081	-		CCNA_01030	0.32	-0.5
1,119,107	-		CCNA_01030	0.36	-0.2
1,119,123	-		CCNA_01030	0.39	+0.0
1,119,140	-		CCNA_01030	0.41	-0.0
1,119,149	+		CCNA_01030	0.43	-1.6
1,119,161	+		CCNA_01030	0.45	-1.6
1,119,164	-		CCNA_01030	0.45	-0.9
1,119,214	+		CCNA_01030	0.53	-1.6
1,119,214	+		CCNA_01030	0.53	-0.0
1,119,215	+		CCNA_01030	0.54	+0.5
1,119,215	+		CCNA_01030	0.54	-1.9
1,119,215	+		CCNA_01030	0.54	-0.6
1,119,223	-		CCNA_01030	0.55	-1.6
1,119,223	-		CCNA_01030	0.55	+0.5
1,119,223	-		CCNA_01030	0.55	-1.8
1,119,229	-		CCNA_01030	0.56	-2.4
1,119,234	-		CCNA_01030	0.57	+0.1
1,119,241	-		CCNA_01030	0.58	+0.7
1,119,254	+		CCNA_01030	0.60	+0.4
1,119,254	+		CCNA_01030	0.60	-1.9
1,119,254	+		CCNA_01030	0.60	-1.9
1,119,254	+		CCNA_01030	0.60	-2.0
1,119,262	-		CCNA_01030	0.61	+0.3
1,119,262	-		CCNA_01030	0.61	-0.5
1,119,262	-		CCNA_01030	0.61	+0.1
1,119,272	+		CCNA_01030	0.63	-0.9
1,119,295	-		CCNA_01030	0.67	+1.7
1,119,349	-		CCNA_01030	0.75	+0.5
1,119,352	-		CCNA_01030	0.76	-0.2
1,119,352	-		CCNA_01030	0.76	+0.2
1,119,417	+		CCNA_01030	0.86	-0.0
1,119,442	-				-0.5
1,119,452	-				+0.4
1,119,495	-				-2.1
1,119,626	-				-0.6
1,119,633	+				-1.8
1,119,633	+				-2.6
1,119,641	-				-1.9
1,119,656	-				-0.6
1,119,665	+				-1.6
1,119,678	+				-2.1
1,119,686	-				-0.6
1,119,689	+				+0.1
1,119,697	+				-1.5
1,119,704	-				-1.6
1,119,704	-				-2.2
1,119,705	-				-0.9
1,119,705	-				-1.6
1,119,706	+				+0.8
1,119,721	-				-2.5
1,119,721	-				-0.2
1,119,735	-				+1.7
1,119,776	+				-0.7
1,119,784	-				-1.5
1,119,784	-				-1.1
1,119,784	-				-1.7
1,119,792	+				+1.1