Experiment: Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_917 and Ac3H11_918 are separated by 221 nucleotides Ac3H11_918 and Ac3H11_919 are separated by 299 nucleotides
Ac3H11_917 - multi-domain regulatory protein, at 29,926 to 31,074
_917
Ac3H11_918 - hypothetical protein, at 31,296 to 32,165
_918
Ac3H11_919 - Transcriptional regulator, LysR family, at 32,465 to 33,412
_919
Position (kb)
31
32
33 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 30.438 kb on - strand, within Ac3H11_917 at 31.738 kb on + strand, within Ac3H11_918 at 31.762 kb on + strand, within Ac3H11_918 at 31.762 kb on + strand, within Ac3H11_918 at 31.762 kb on + strand, within Ac3H11_918 at 31.763 kb on - strand, within Ac3H11_918 at 31.763 kb on - strand, within Ac3H11_918 at 31.951 kb on + strand, within Ac3H11_918 at 31.951 kb on + strand, within Ac3H11_918 at 31.952 kb on - strand, within Ac3H11_918 at 31.952 kb on - strand, within Ac3H11_918 at 31.952 kb on - strand, within Ac3H11_918 at 32.362 kb on + strand at 32.362 kb on + strand at 32.363 kb on - strand at 32.363 kb on - strand at 32.363 kb on - strand at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.679 kb on + strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.680 kb on - strand, within Ac3H11_919 at 32.722 kb on - strand, within Ac3H11_919 at 32.722 kb on - strand, within Ac3H11_919 at 32.722 kb on - strand, within Ac3H11_919 at 32.722 kb on - strand, within Ac3H11_919 at 32.751 kb on + strand, within Ac3H11_919 at 32.751 kb on + strand, within Ac3H11_919 at 32.751 kb on + strand, within Ac3H11_919 at 32.891 kb on + strand, within Ac3H11_919 at 32.891 kb on + strand, within Ac3H11_919 at 32.892 kb on - strand, within Ac3H11_919 at 32.892 kb on - strand, within Ac3H11_919 at 32.892 kb on - strand, within Ac3H11_919
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.001 mg/ml remove 30,438 - Ac3H11_917 0.45 +0.5 31,738 + Ac3H11_918 0.51 +0.7 31,762 + Ac3H11_918 0.54 -0.1 31,762 + Ac3H11_918 0.54 -0.4 31,762 + Ac3H11_918 0.54 -0.9 31,763 - Ac3H11_918 0.54 +1.0 31,763 - Ac3H11_918 0.54 -0.0 31,951 + Ac3H11_918 0.75 -0.6 31,951 + Ac3H11_918 0.75 -0.3 31,952 - Ac3H11_918 0.75 +0.9 31,952 - Ac3H11_918 0.75 +1.4 31,952 - Ac3H11_918 0.75 +0.2 32,362 + -0.2 32,362 + +0.1 32,363 - -0.7 32,363 - +0.4 32,363 - +0.1 32,679 + Ac3H11_919 0.23 -2.8 32,679 + Ac3H11_919 0.23 -0.1 32,679 + Ac3H11_919 0.23 -0.1 32,679 + Ac3H11_919 0.23 +1.1 32,679 + Ac3H11_919 0.23 -0.0 32,679 + Ac3H11_919 0.23 -0.7 32,679 + Ac3H11_919 0.23 +0.8 32,679 + Ac3H11_919 0.23 -0.7 32,679 + Ac3H11_919 0.23 -0.7 32,679 + Ac3H11_919 0.23 -0.2 32,679 + Ac3H11_919 0.23 +0.7 32,680 - Ac3H11_919 0.23 +0.1 32,680 - Ac3H11_919 0.23 -1.0 32,680 - Ac3H11_919 0.23 +1.0 32,680 - Ac3H11_919 0.23 -0.6 32,680 - Ac3H11_919 0.23 -2.0 32,680 - Ac3H11_919 0.23 -0.4 32,680 - Ac3H11_919 0.23 -0.8 32,680 - Ac3H11_919 0.23 -0.3 32,722 - Ac3H11_919 0.27 +0.1 32,722 - Ac3H11_919 0.27 -2.1 32,722 - Ac3H11_919 0.27 +0.3 32,722 - Ac3H11_919 0.27 -0.6 32,751 + Ac3H11_919 0.30 -0.0 32,751 + Ac3H11_919 0.30 +0.5 32,751 + Ac3H11_919 0.30 -1.1 32,891 + Ac3H11_919 0.45 -1.2 32,891 + Ac3H11_919 0.45 -1.0 32,892 - Ac3H11_919 0.45 -0.6 32,892 - Ac3H11_919 0.45 -2.2 32,892 - Ac3H11_919 0.45 -0.5
Or see this region's nucleotide sequence