Experiment: Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3817 and Ac3H11_3818 are separated by 174 nucleotides Ac3H11_3818 and Ac3H11_3819 are separated by 621 nucleotides
Ac3H11_3817 - strictosidine synthase family protein, at 32,326 to 33,444
_3817
Ac3H11_3818 - Methionyl-tRNA synthetase (EC 6.1.1.10), at 33,619 to 35,709
_3818
Ac3H11_3819 - FIG00537335: hypothetical protein, at 36,331 to 36,978
_3819
Position (kb) 33
34
35
36 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 32.736 kb on - strand, within Ac3H11_3817 at 32.736 kb on - strand, within Ac3H11_3817 at 32.846 kb on + strand, within Ac3H11_3817 at 32.847 kb on - strand, within Ac3H11_3817 at 32.907 kb on + strand, within Ac3H11_3817 at 32.954 kb on + strand, within Ac3H11_3817 at 32.955 kb on - strand, within Ac3H11_3817 at 32.955 kb on - strand, within Ac3H11_3817 at 33.207 kb on - strand, within Ac3H11_3817 at 33.207 kb on - strand, within Ac3H11_3817 at 33.207 kb on - strand, within Ac3H11_3817 at 33.378 kb on - strand at 33.427 kb on + strand at 33.427 kb on + strand at 33.428 kb on - strand at 33.428 kb on - strand at 33.428 kb on - strand at 35.393 kb on - strand, within Ac3H11_3818 at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.659 kb on + strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.660 kb on - strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.723 kb on + strand at 35.723 kb on + strand at 35.723 kb on + strand at 35.723 kb on + strand at 35.723 kb on + strand at 35.723 kb on + strand at 35.724 kb on - strand at 35.724 kb on - strand at 35.724 kb on - strand at 35.724 kb on - strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.727 kb on + strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.728 kb on - strand at 35.750 kb on + strand at 35.750 kb on + strand at 35.750 kb on + strand at 35.751 kb on - strand at 35.751 kb on - strand at 35.751 kb on - strand at 35.764 kb on - strand at 35.797 kb on + strand at 35.797 kb on + strand at 35.797 kb on + strand at 35.855 kb on + strand at 35.855 kb on + strand at 35.856 kb on - strand at 35.856 kb on - strand at 35.889 kb on + strand at 35.889 kb on + strand at 35.889 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.895 kb on + strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.896 kb on - strand at 35.922 kb on + strand at 35.922 kb on + strand at 35.922 kb on + strand at 35.922 kb on + strand at 35.922 kb on + strand at 35.923 kb on - strand at 35.923 kb on - strand at 35.998 kb on + strand at 35.998 kb on + strand at 35.999 kb on - strand at 35.999 kb on - strand at 36.017 kb on + strand at 36.027 kb on + strand at 36.027 kb on + strand at 36.028 kb on - strand at 36.028 kb on - strand at 36.048 kb on - strand at 36.098 kb on + strand at 36.098 kb on + strand at 36.098 kb on + strand at 36.099 kb on - strand at 36.132 kb on + strand at 36.132 kb on + strand at 36.132 kb on + strand at 36.133 kb on - strand at 36.133 kb on - strand at 36.133 kb on - strand at 36.133 kb on - strand at 36.133 kb on - strand at 36.133 kb on - strand at 36.145 kb on + strand at 36.152 kb on + strand at 36.153 kb on - strand at 36.153 kb on - strand at 36.153 kb on - strand at 36.153 kb on - strand at 36.170 kb on - strand at 36.214 kb on + strand at 36.215 kb on - strand at 36.215 kb on - strand at 36.236 kb on - strand at 36.269 kb on + strand at 36.269 kb on + strand at 36.269 kb on + strand at 36.269 kb on + strand at 36.269 kb on + strand at 36.269 kb on + strand at 36.270 kb on - strand at 36.270 kb on - strand at 36.270 kb on - strand at 36.316 kb on + strand at 36.317 kb on - strand at 36.345 kb on - strand at 36.345 kb on - strand at 36.408 kb on - strand, within Ac3H11_3819 at 36.498 kb on - strand, within Ac3H11_3819 at 36.513 kb on - strand, within Ac3H11_3819 at 36.623 kb on + strand, within Ac3H11_3819 at 36.623 kb on + strand, within Ac3H11_3819 at 36.623 kb on + strand, within Ac3H11_3819
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.001 mg/ml remove 32,736 - Ac3H11_3817 0.37 +0.6 32,736 - Ac3H11_3817 0.37 +0.1 32,846 + Ac3H11_3817 0.46 +0.1 32,847 - Ac3H11_3817 0.47 -0.4 32,907 + Ac3H11_3817 0.52 +0.6 32,954 + Ac3H11_3817 0.56 +1.6 32,955 - Ac3H11_3817 0.56 +1.6 32,955 - Ac3H11_3817 0.56 +1.1 33,207 - Ac3H11_3817 0.79 +0.0 33,207 - Ac3H11_3817 0.79 -0.6 33,207 - Ac3H11_3817 0.79 -0.3 33,378 - -0.2 33,427 + +0.2 33,427 + -0.5 33,428 - +0.6 33,428 - -0.6 33,428 - -0.5 35,393 - Ac3H11_3818 0.85 +0.4 35,659 + -0.1 35,659 + -1.9 35,659 + -0.5 35,659 + -0.3 35,659 + -0.9 35,659 + +0.2 35,659 + -0.9 35,659 + +0.1 35,659 + -0.8 35,659 + -0.1 35,659 + -0.0 35,659 + -0.6 35,660 - -1.5 35,660 - +0.4 35,660 - +0.5 35,660 - +0.3 35,660 - -2.3 35,660 - -1.1 35,660 - +0.0 35,660 - -1.6 35,660 - +0.7 35,660 - -2.2 35,660 - +0.1 35,660 - -1.0 35,660 - -0.2 35,660 - -1.1 35,660 - -0.3 35,660 - -0.9 35,663 + -0.0 35,663 + -0.8 35,663 + -0.8 35,663 + +0.1 35,663 + -1.3 35,663 + -0.3 35,723 + -0.6 35,723 + +1.1 35,723 + +0.4 35,723 + +0.6 35,723 + -0.3 35,723 + -0.1 35,724 - -0.4 35,724 - +0.5 35,724 - -1.2 35,724 - +0.2 35,727 + +0.8 35,727 + -2.3 35,727 + +0.6 35,727 + -0.5 35,727 + +0.2 35,727 + -0.9 35,727 + -2.7 35,727 + +0.3 35,727 + -1.0 35,728 - +0.2 35,728 - -0.1 35,728 - -0.2 35,728 - +0.5 35,728 - -0.0 35,728 - +0.7 35,728 - +0.0 35,728 - -1.4 35,728 - +0.0 35,750 + -0.8 35,750 + +0.0 35,750 + +0.1 35,751 - -0.6 35,751 - -2.7 35,751 - -0.4 35,764 - +0.5 35,797 + +0.4 35,797 + -2.2 35,797 + -1.8 35,855 + +0.3 35,855 + -1.4 35,856 - +0.7 35,856 - -0.5 35,889 + -0.0 35,889 + -0.0 35,889 + -0.3 35,895 + +1.3 35,895 + +0.4 35,895 + -0.4 35,895 + +0.6 35,895 + -1.5 35,895 + +1.6 35,895 + -0.1 35,895 + +0.1 35,895 + +0.1 35,895 + +0.6 35,895 + +1.8 35,895 + -0.3 35,895 + -0.0 35,895 + +0.1 35,895 + +1.8 35,895 + -1.3 35,895 + +0.4 35,895 + -0.0 35,895 + +0.2 35,895 + -2.0 35,895 + +0.9 35,895 + -0.1 35,896 - -0.5 35,896 - -0.7 35,896 - -0.5 35,896 - +0.9 35,896 - +0.1 35,896 - -1.9 35,896 - -0.4 35,896 - -0.1 35,896 - +0.2 35,896 - -0.2 35,896 - -0.3 35,896 - -0.2 35,896 - -0.1 35,896 - -0.3 35,896 - +0.2 35,896 - +0.6 35,896 - +0.2 35,896 - -0.2 35,896 - +1.4 35,896 - +0.2 35,896 - -0.7 35,896 - +0.5 35,922 + +0.5 35,922 + +0.0 35,922 + +1.9 35,922 + +0.2 35,922 + -0.3 35,923 - +0.5 35,923 - -0.1 35,998 + +0.7 35,998 + +0.3 35,999 - +0.7 35,999 - +0.7 36,017 + +0.0 36,027 + -0.1 36,027 + -0.3 36,028 - +2.0 36,028 - -0.5 36,048 - +0.9 36,098 + -0.3 36,098 + -0.4 36,098 + -0.3 36,099 - -1.0 36,132 + -1.0 36,132 + +0.1 36,132 + +0.3 36,133 - +0.8 36,133 - -1.6 36,133 - +0.8 36,133 - +1.0 36,133 - +0.1 36,133 - -0.9 36,145 + -0.3 36,152 + -0.3 36,153 - -1.4 36,153 - -1.2 36,153 - -0.4 36,153 - -0.6 36,170 - +1.6 36,214 + -1.9 36,215 - -0.1 36,215 - -1.9 36,236 - -0.4 36,269 + -0.3 36,269 + +0.1 36,269 + -1.8 36,269 + +0.0 36,269 + -0.2 36,269 + -0.4 36,270 - -0.7 36,270 - +0.4 36,270 - +0.5 36,316 + +0.7 36,317 - +0.4 36,345 - -0.2 36,345 - +0.2 36,408 - Ac3H11_3819 0.12 -2.8 36,498 - Ac3H11_3819 0.26 -0.5 36,513 - Ac3H11_3819 0.28 -0.5 36,623 + Ac3H11_3819 0.45 +0.8 36,623 + Ac3H11_3819 0.45 +0.8 36,623 + Ac3H11_3819 0.45 -1.2
Or see this region's nucleotide sequence