Experiment: Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3608 and Ac3H11_3609 are separated by 30 nucleotides Ac3H11_3609 and Ac3H11_3610 are separated by 90 nucleotides Ac3H11_3610 and Ac3H11_3611 overlap by 4 nucleotides
Ac3H11_3608 - hypothetical protein, at 161,378 to 161,746
_3608
Ac3H11_3609 - Transcriptional regulator, IclR family, at 161,777 to 162,529
_3609
Ac3H11_3610 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 162,620 to 163,465
_3610
Ac3H11_3611 - Monooxygenase, flavin-binding family, at 163,462 to 164,796
_3611
Position (kb)
162
163
164 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.669 kb on + strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.670 kb on - strand, within Ac3H11_3608 at 161.693 kb on - strand, within Ac3H11_3608 at 161.718 kb on + strand at 161.734 kb on - strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.746 kb on + strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.747 kb on - strand at 161.763 kb on + strand at 161.778 kb on + strand at 161.779 kb on - strand at 161.779 kb on - strand at 161.835 kb on - strand at 161.835 kb on - strand at 161.835 kb on - strand at 161.945 kb on + strand, within Ac3H11_3609 at 161.945 kb on + strand, within Ac3H11_3609 at 161.945 kb on + strand, within Ac3H11_3609 at 161.945 kb on + strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.946 kb on - strand, within Ac3H11_3609 at 161.970 kb on + strand, within Ac3H11_3609 at 161.970 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.195 kb on + strand, within Ac3H11_3609 at 162.345 kb on + strand, within Ac3H11_3609 at 162.346 kb on - strand, within Ac3H11_3609 at 162.785 kb on + strand, within Ac3H11_3610 at 162.785 kb on + strand, within Ac3H11_3610 at 162.785 kb on + strand, within Ac3H11_3610 at 162.785 kb on + strand, within Ac3H11_3610 at 162.815 kb on - strand, within Ac3H11_3610 at 162.815 kb on - strand, within Ac3H11_3610 at 162.869 kb on - strand, within Ac3H11_3610 at 163.169 kb on + strand, within Ac3H11_3610 at 163.169 kb on + strand, within Ac3H11_3610 at 163.645 kb on + strand, within Ac3H11_3611 at 163.645 kb on + strand, within Ac3H11_3611 at 163.645 kb on + strand, within Ac3H11_3611 at 163.646 kb on - strand, within Ac3H11_3611 at 163.646 kb on - strand, within Ac3H11_3611 at 163.750 kb on + strand, within Ac3H11_3611 at 163.750 kb on + strand, within Ac3H11_3611 at 163.792 kb on + strand, within Ac3H11_3611 at 163.997 kb on - strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.087 kb on - strand, within Ac3H11_3611 at 164.122 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.126 kb on - strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.141 kb on - strand, within Ac3H11_3611 at 164.141 kb on - strand at 164.141 kb on - strand, within Ac3H11_3611 at 164.276 kb on - strand, within Ac3H11_3611 at 164.284 kb on + strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.414 kb on - strand, within Ac3H11_3611 at 164.441 kb on - strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.453 kb on - strand, within Ac3H11_3611
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.001 mg/ml remove 161,669 + Ac3H11_3608 0.79 +1.1 161,669 + Ac3H11_3608 0.79 +1.6 161,669 + Ac3H11_3608 0.79 -0.9 161,669 + Ac3H11_3608 0.79 +1.3 161,669 + Ac3H11_3608 0.79 +0.6 161,670 - Ac3H11_3608 0.79 -2.2 161,670 - Ac3H11_3608 0.79 -0.7 161,670 - Ac3H11_3608 0.79 -1.3 161,670 - Ac3H11_3608 0.79 -0.6 161,670 - Ac3H11_3608 0.79 +1.2 161,670 - Ac3H11_3608 0.79 -0.7 161,693 - Ac3H11_3608 0.85 -0.6 161,718 + -0.1 161,734 - -1.5 161,746 + +1.2 161,746 + -1.6 161,746 + -1.7 161,746 + -1.3 161,746 + -1.0 161,746 + -1.6 161,746 + -0.5 161,746 + +2.3 161,746 + +0.0 161,747 - +0.2 161,747 - +0.9 161,747 - -0.5 161,747 - +0.8 161,747 - -1.0 161,747 - +0.1 161,747 - +0.0 161,747 - -0.7 161,747 - -1.2 161,747 - -0.2 161,747 - +0.6 161,747 - -0.3 161,747 - -0.6 161,763 + +2.3 161,778 + +0.8 161,779 - -0.5 161,779 - -0.3 161,835 - -0.2 161,835 - +0.8 161,835 - -0.5 161,945 + Ac3H11_3609 0.22 -0.1 161,945 + Ac3H11_3609 0.22 -0.5 161,945 + Ac3H11_3609 0.22 -0.5 161,945 + Ac3H11_3609 0.22 -0.7 161,946 - Ac3H11_3609 0.22 -0.1 161,946 - Ac3H11_3609 0.22 -0.0 161,946 - Ac3H11_3609 0.22 -1.3 161,946 - Ac3H11_3609 0.22 -1.0 161,970 + Ac3H11_3609 0.26 +1.2 161,970 + Ac3H11_3609 0.26 -0.1 162,195 + Ac3H11_3609 0.56 -1.0 162,195 + Ac3H11_3609 0.56 -0.8 162,195 + Ac3H11_3609 0.56 -0.9 162,195 + Ac3H11_3609 0.56 -1.3 162,195 + Ac3H11_3609 0.56 -0.4 162,345 + Ac3H11_3609 0.75 -0.3 162,346 - Ac3H11_3609 0.76 +2.5 162,785 + Ac3H11_3610 0.20 -0.0 162,785 + Ac3H11_3610 0.20 -0.1 162,785 + Ac3H11_3610 0.20 -1.0 162,785 + Ac3H11_3610 0.20 -0.5 162,815 - Ac3H11_3610 0.23 -0.5 162,815 - Ac3H11_3610 0.23 -0.5 162,869 - Ac3H11_3610 0.29 -1.1 163,169 + Ac3H11_3610 0.65 -0.2 163,169 + Ac3H11_3610 0.65 +0.6 163,645 + Ac3H11_3611 0.14 +1.9 163,645 + Ac3H11_3611 0.14 +1.2 163,645 + Ac3H11_3611 0.14 +0.8 163,646 - Ac3H11_3611 0.14 +0.9 163,646 - Ac3H11_3611 0.14 +0.5 163,750 + Ac3H11_3611 0.22 -0.1 163,750 + Ac3H11_3611 0.22 +0.3 163,792 + Ac3H11_3611 0.25 +0.1 163,997 - Ac3H11_3611 0.40 -0.7 164,086 + Ac3H11_3611 0.47 -0.3 164,086 + Ac3H11_3611 0.47 -0.1 164,087 - Ac3H11_3611 0.47 +0.4 164,122 + Ac3H11_3611 0.49 +0.9 164,125 + Ac3H11_3611 0.50 -0.4 164,125 + Ac3H11_3611 0.50 -2.1 164,125 + Ac3H11_3611 0.50 -0.3 164,125 + Ac3H11_3611 0.50 +0.3 164,125 + Ac3H11_3611 0.50 -0.8 164,126 - Ac3H11_3611 0.50 -0.1 164,140 + Ac3H11_3611 0.51 -0.7 164,140 + Ac3H11_3611 0.51 +0.7 164,140 + Ac3H11_3611 0.51 +0.5 164,140 + Ac3H11_3611 0.51 +0.3 164,140 + Ac3H11_3611 0.51 +0.5 164,140 + Ac3H11_3611 0.51 -0.6 164,141 - Ac3H11_3611 0.51 +0.7 164,141 - +0.5 164,141 - Ac3H11_3611 0.51 -0.2 164,276 - Ac3H11_3611 0.61 -0.5 164,284 + Ac3H11_3611 0.62 +0.4 164,285 - Ac3H11_3611 0.62 +0.2 164,285 - Ac3H11_3611 0.62 -0.4 164,285 - Ac3H11_3611 0.62 +1.0 164,285 - Ac3H11_3611 0.62 -1.3 164,413 + Ac3H11_3611 0.71 -1.5 164,413 + Ac3H11_3611 0.71 +0.7 164,414 - Ac3H11_3611 0.71 -0.4 164,441 - Ac3H11_3611 0.73 +0.0 164,452 + Ac3H11_3611 0.74 +0.3 164,452 + Ac3H11_3611 0.74 +0.2 164,453 - Ac3H11_3611 0.74 +0.5
Or see this region's nucleotide sequence